RNA–Protein interactions for RNA: ENST00000472627.1

SMURF1-203, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene SMURF1, Length 825 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-203ENST00000472627 PPIL1Q9Y3C6 166 aa13.74□□□□□ -0.21
SMURF1-203ENST00000472627 POLQO75417 2590 aa13.74□□□□□ -0.21
SMURF1-203ENST00000472627 PDZK1P1A8MUH7 402 aa13.73□□□□□ -0.21
SMURF1-203ENST00000472627 GPR89AB7ZAQ6 455 aa13.73□□□□□ -0.21
SMURF1-203ENST00000472627 KRT86O43790 486 aa13.73□□□□□ -0.21
SMURF1-203ENST00000472627 GPR89BP0CG08 455 aa13.73□□□□□ -0.21
SMURF1-203ENST00000472627 ERCC2P18074 760 aa13.73□□□□□ -0.21
SMURF1-203ENST00000472627 CA4P22748 312 aa13.73□□□□□ -0.21
SMURF1-203ENST00000472627 GRNP28799 593 aaKnown RBP13.73□□□□□ -0.21
SMURF1-203ENST00000472627 IL10RAQ13651 578 aa13.73□□□□□ -0.21
SMURF1-203ENST00000472627 ZXDCQ2QGD7 858 aaPredicted RBP13.73□□□□□ -0.21
SMURF1-203ENST00000472627 PWWP2BQ6NUJ5 590 aa13.73□□□□□ -0.21
SMURF1-203ENST00000472627 ARHGAP36Q6ZRI8 547 aa13.73□□□□□ -0.21
SMURF1-203ENST00000472627 PHF13Q86YI8 300 aaPredicted RBP13.73□□□□□ -0.21
SMURF1-203ENST00000472627 ARHGAP12Q8IWW6 846 aa13.73□□□□□ -0.21
SMURF1-203ENST00000472627 RBMXL3Q8N7X1 1067 aaKnown RBP13.73□□□□□ -0.21
SMURF1-203ENST00000472627 SGSM3Q96HU1 749 aa13.73□□□□□ -0.21
SMURF1-203ENST00000472627 TUBGCP2Q9BSJ2 902 aa13.73□□□□□ -0.21
SMURF1-203ENST00000472627 SEPT11Q9NVA2 429 aaKnown RBP13.73□□□□□ -0.21
SMURF1-203ENST00000472627 ASF1BQ9NVP2 202 aa13.73□□□□□ -0.21
SMURF1-203ENST00000472627 OGFRQ9NZT2 677 aa13.73□□□□□ -0.21
SMURF1-203ENST00000472627 EPHA6Q9UF33 1036 aa13.73□□□□□ -0.21
SMURF1-203ENST00000472627 B3GNT3Q9Y2A9 372 aa13.73□□□□□ -0.21
SMURF1-203ENST00000472627 TTC24A2A3L6 582 aaPredicted RBP13.72□□□□□ -0.21
SMURF1-203ENST00000472627 A6NL46 340 aa13.72□□□□□ -0.21
SMURF1-203ENST00000472627 ZNF185O15231 689 aa13.72□□□□□ -0.21
SMURF1-203ENST00000472627 UNGP13051 313 aaPredicted RBP13.72□□□□□ -0.21
SMURF1-203ENST00000472627 TNFAIP3P21580 790 aa13.72□□□□□ -0.21
SMURF1-203ENST00000472627 VAV2P52735 878 aa13.72□□□□□ -0.21
SMURF1-203ENST00000472627 STC1P52823 247 aa13.72□□□□□ -0.21
SMURF1-203ENST00000472627 GSDMDP57764 484 aa13.72□□□□□ -0.21
SMURF1-203ENST00000472627 INSCQ1MX18 579 aa13.72□□□□□ -0.21
SMURF1-203ENST00000472627 PPP6R3Q5H9R7 873 aaPredicted RBP13.72□□□□□ -0.21
SMURF1-203ENST00000472627 ERMARDQ5T6L9 678 aa13.72□□□□□ -0.21
SMURF1-203ENST00000472627 VWA5B1Q5TIE3 1220 aa13.72□□□□□ -0.21
SMURF1-203ENST00000472627 MARC1Q5VT66 337 aa13.72□□□□□ -0.21
SMURF1-203ENST00000472627 IZUMO3Q5VZ72 239 aa13.72□□□□□ -0.21
SMURF1-203ENST00000472627 FAM199XQ6PEV8 388 aaPredicted RBP13.72□□□□□ -0.21
SMURF1-203ENST00000472627 KMT5CQ86Y97 462 aa13.72□□□□□ -0.21
SMURF1-203ENST00000472627 TMEM126BQ8IUX1 230 aa13.72□□□□□ -0.21
SMURF1-203ENST00000472627 CISD2Q8N5K1 135 aaKnown RBP13.72□□□□□ -0.21
SMURF1-203ENST00000472627 ATPAF2Q8N5M1 289 aa13.72□□□□□ -0.21
SMURF1-203ENST00000472627 ARFGAP1Q8N6T3 406 aa13.72□□□□□ -0.21
SMURF1-203ENST00000472627 CXorf40BQ96DE9 158 aa13.72□□□□□ -0.21
SMURF1-203ENST00000472627 C19orf60Q96EN9 201 aa13.72□□□□□ -0.21
SMURF1-203ENST00000472627 AGAP2Q99490 1192 aa13.72□□□□□ -0.21
SMURF1-203ENST00000472627 SMAD5Q99717 465 aaKnown RBP13.72□□□□□ -0.21
SMURF1-203ENST00000472627 NUDT9Q9BW91 350 aa13.72□□□□□ -0.21
SMURF1-203ENST00000472627 RAB33BQ9H082 229 aa13.72□□□□□ -0.21
SMURF1-203ENST00000472627 ZWILCHQ9H900 591 aa13.72□□□□□ -0.21
SMURF1-203ENST00000472627 KLC4Q9NSK0 619 aa13.72□□□□□ -0.21
SMURF1-203ENST00000472627 COPG1Q9Y678 874 aaKnown RBP13.72□□□□□ -0.21
SMURF1-203ENST00000472627 OTOGQ6ZRI0 2925 aa13.72□□□□□ -0.21
SMURF1-203ENST00000472627 CSMD1Q96PZ7 3565 aa13.72□□□□□ -0.21
SMURF1-203ENST00000472627 A0A0J9YYE9 177 aa13.71□□□□□ -0.21
SMURF1-203ENST00000472627 NUAK1O60285 661 aa13.71□□□□□ -0.21
SMURF1-203ENST00000472627 SCRG1O75711 98 aa13.71□□□□□ -0.21
SMURF1-203ENST00000472627 TRBC1P01850 177 aa13.71□□□□□ -0.21
SMURF1-203ENST00000472627 SOX5P35711 763 aa13.71□□□□□ -0.21
SMURF1-203ENST00000472627 MMP13P45452 471 aa13.71□□□□□ -0.21
SMURF1-203ENST00000472627 CDH6P55285 790 aa13.71□□□□□ -0.21
SMURF1-203ENST00000472627 PTSQ03393 145 aa13.71□□□□□ -0.21
SMURF1-203ENST00000472627 PTP4A2Q12974 167 aa13.71□□□□□ -0.21
SMURF1-203ENST00000472627 KYNUQ16719 465 aa13.71□□□□□ -0.21
SMURF1-203ENST00000472627 CLEC16AQ2KHT3 1053 aa13.71□□□□□ -0.21
SMURF1-203ENST00000472627 RFLNAQ6ZTI6 216 aa13.71□□□□□ -0.21
SMURF1-203ENST00000472627 PSTKQ8IV42 348 aaKnown RBP13.71□□□□□ -0.21
SMURF1-203ENST00000472627 MCEMP1Q8IX19 187 aa13.71□□□□□ -0.21
SMURF1-203ENST00000472627 NPWQ8N729 165 aa13.71□□□□□ -0.21
SMURF1-203ENST00000472627 GLIS1Q8NBF1 620 aa13.71□□□□□ -0.21
SMURF1-203ENST00000472627 OR8K5Q8NH50 307 aa13.71□□□□□ -0.21
SMURF1-203ENST00000472627 CCHCR1Q8TD31 782 aa13.71□□□□□ -0.21
SMURF1-203ENST00000472627 PIH1D2Q8WWB5 315 aa13.71□□□□□ -0.21
SMURF1-203ENST00000472627 RSC1A1Q92681 617 aa13.71□□□□□ -0.21
SMURF1-203ENST00000472627 ZNF514Q96K75 400 aaPredicted RBP13.71□□□□□ -0.21
SMURF1-203ENST00000472627 NSMCE3Q96MG7 304 aa13.71□□□□□ -0.21
SMURF1-203ENST00000472627 RUFY1Q96T51 708 aa13.71□□□□□ -0.21
SMURF1-203ENST00000472627 FGF21Q9NSA1 209 aa13.71□□□□□ -0.21
SMURF1-203ENST00000472627 GPATCH2LQ9NWQ4 482 aa13.71□□□□□ -0.21
SMURF1-203ENST00000472627 PKD2L2Q9NZM6 624 aa13.71□□□□□ -0.21
SMURF1-203ENST00000472627 SLC30A1Q9Y6M5 507 aa13.71□□□□□ -0.21
SMURF1-203ENST00000472627 RGSL1A5PLK6 1076 aa13.7□□□□□ -0.22
SMURF1-203ENST00000472627 KIF1CO43896 1103 aaKnown RBP13.7□□□□□ -0.22
SMURF1-203ENST00000472627 PRPSAP2O60256 369 aa13.7□□□□□ -0.22
SMURF1-203ENST00000472627 RNF8O76064 485 aa13.7□□□□□ -0.22
SMURF1-203ENST00000472627 IPO13O94829 963 aaKnown RBP13.7□□□□□ -0.22
SMURF1-203ENST00000472627 TIAF1O95411 115 aa13.7□□□□□ -0.22
SMURF1-203ENST00000472627 JCHAINP01591 159 aa13.7□□□□□ -0.22
SMURF1-203ENST00000472627 RAB40ALP0C0E4 278 aa13.7□□□□□ -0.22
SMURF1-203ENST00000472627 CHRNB2P17787 502 aa13.7□□□□□ -0.22
SMURF1-203ENST00000472627 VCLP18206 1134 aa13.7□□□□□ -0.22
SMURF1-203ENST00000472627 HALP42357 657 aa13.7□□□□□ -0.22
SMURF1-203ENST00000472627 HCAR3P49019 387 aa13.7□□□□□ -0.22
SMURF1-203ENST00000472627 MAXP61244 160 aa13.7□□□□□ -0.22
SMURF1-203ENST00000472627 RPL7AP62424 266 aaKnown RBP13.7□□□□□ -0.22
SMURF1-203ENST00000472627 ITKQ08881 620 aa13.7□□□□□ -0.22
SMURF1-203ENST00000472627 TDRD12Q587J7 1177 aaKnown RBP13.7□□□□□ -0.22
SMURF1-203ENST00000472627 MIIPQ5JXC2 388 aa13.7□□□□□ -0.22
SMURF1-203ENST00000472627 TMTC4Q5T4D3 741 aa13.7□□□□□ -0.22
SMURF1-203ENST00000472627 DPY19L2P1Q6NXN4 242 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms