RNA–Protein interactions for RNA: ENST00000472479.1

UBE2F-220, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2

Gene UBE2F, Length 1,458 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-220ENST00000472479 DTX3LQ8TDB6 740 aa10.42□□□□□ -0.74
UBE2F-220ENST00000472479 HNRNPLLQ8WVV9 542 aaKnown RBP10.42□□□□□ -0.74
UBE2F-220ENST00000472479 FUBP1Q96AE4 644 aaKnown RBP10.42□□□□□ -0.74
UBE2F-220ENST00000472479 SGSM3Q96HU1 749 aa10.42□□□□□ -0.74
UBE2F-220ENST00000472479 WDR92Q96MX6 357 aa10.42□□□□□ -0.74
UBE2F-220ENST00000472479 VPS35Q96QK1 796 aa10.42□□□□□ -0.74
UBE2F-220ENST00000472479 TSSK1BQ9BXA7 367 aa10.42□□□□□ -0.74
UBE2F-220ENST00000472479 CENPHQ9H3R5 247 aa10.42□□□□□ -0.74
UBE2F-220ENST00000472479 INTS10Q9NVR2 710 aaKnown RBP10.42□□□□□ -0.74
UBE2F-220ENST00000472479 GNPTGQ9UJJ9 305 aa10.42□□□□□ -0.74
UBE2F-220ENST00000472479 GPSM3Q9Y4H4 160 aa10.42□□□□□ -0.74
UBE2F-220ENST00000472479 CACNA1IQ9P0X4 2223 aa10.42□□□□□ -0.74
UBE2F-220ENST00000472479 A0A1B0GTW7 788 aa10.42□□□□□ -0.74
UBE2F-220ENST00000472479 FAM159BA6NKW6 160 aa10.42□□□□□ -0.74
UBE2F-220ENST00000472479 OR2AG2A6NM03 316 aa10.42□□□□□ -0.74
UBE2F-220ENST00000472479 CXorf49A8MYA2 514 aaPredicted RBP10.42□□□□□ -0.74
UBE2F-220ENST00000472479 TLR4O00206 839 aa10.42□□□□□ -0.74
UBE2F-220ENST00000472479 GAPDHSO14556 408 aaPredicted RBP10.42□□□□□ -0.74
UBE2F-220ENST00000472479 PRMT5O14744 637 aaPredicted RBP10.42□□□□□ -0.74
UBE2F-220ENST00000472479 VEGFDO43915 354 aa10.42□□□□□ -0.74
UBE2F-220ENST00000472479 HAUS5O94927 633 aa10.42□□□□□ -0.74
UBE2F-220ENST00000472479 TRIM16O95361 564 aa10.42□□□□□ -0.74
UBE2F-220ENST00000472479 TNFP01375 233 aa10.42□□□□□ -0.74
UBE2F-220ENST00000472479 F7P08709 466 aaPredicted RBP10.42□□□□□ -0.74
UBE2F-220ENST00000472479 MYCLP1P12525 358 aaPredicted RBP10.42□□□□□ -0.74
UBE2F-220ENST00000472479 CTSEP14091 401 aa10.42□□□□□ -0.74
UBE2F-220ENST00000472479 ATP1B2P14415 290 aaPredicted RBP10.42□□□□□ -0.74
UBE2F-220ENST00000472479 PSMA3P25788 255 aa10.42□□□□□ -0.74
UBE2F-220ENST00000472479 ARNTP27540 789 aa10.42□□□□□ -0.74
UBE2F-220ENST00000472479 TEAD1P28347 426 aa10.42□□□□□ -0.74
UBE2F-220ENST00000472479 PBLDP30039 288 aaPredicted RBP10.42□□□□□ -0.74
UBE2F-220ENST00000472479 SPRP35270 261 aaPredicted RBP10.42□□□□□ -0.74
UBE2F-220ENST00000472479 GP5P40197 560 aa10.42□□□□□ -0.74
UBE2F-220ENST00000472479 POLD2P49005 469 aa10.42□□□□□ -0.74
UBE2F-220ENST00000472479 CSNK1EP49674 416 aaKnown RBP10.42□□□□□ -0.74
UBE2F-220ENST00000472479 AFF3P51826 1226 aaKnown RBP10.42□□□□□ -0.74
UBE2F-220ENST00000472479 OVGP1Q12889 678 aa10.42□□□□□ -0.74
UBE2F-220ENST00000472479 SEMA3AQ14563 771 aa10.42□□□□□ -0.74
UBE2F-220ENST00000472479 NFATC4Q14934 902 aa10.42□□□□□ -0.74
UBE2F-220ENST00000472479 EFTUD2Q15029 972 aaKnown RBP eCLIP10.42□□□□□ -0.74
UBE2F-220ENST00000472479 GRTP1Q5TC63 336 aa10.42□□□□□ -0.74
UBE2F-220ENST00000472479 ZNF449Q6P9G9 518 aa10.42□□□□□ -0.74
UBE2F-220ENST00000472479 TMEM220Q6QAJ8 160 aa10.42□□□□□ -0.74
UBE2F-220ENST00000472479 KYAT3Q6YP21 454 aaKnown RBP10.42□□□□□ -0.74
UBE2F-220ENST00000472479 KDM7AQ6ZMT4 941 aa10.42□□□□□ -0.74
UBE2F-220ENST00000472479 HDXQ7Z353 690 aa10.42□□□□□ -0.74
UBE2F-220ENST00000472479 RABEPKQ7Z6M1 372 aa10.42□□□□□ -0.74
UBE2F-220ENST00000472479 SLC26A11Q86WA9 606 aa10.42□□□□□ -0.74
UBE2F-220ENST00000472479 GALNT13Q8IUC8 556 aa10.42□□□□□ -0.74
UBE2F-220ENST00000472479 TRAPPC5Q8IUR0 188 aa10.42□□□□□ -0.74
UBE2F-220ENST00000472479 SYT12Q8IV01 421 aa10.42□□□□□ -0.74
UBE2F-220ENST00000472479 HID1Q8IV36 788 aa10.42□□□□□ -0.74
UBE2F-220ENST00000472479 OR13H1Q8NG92 308 aa10.42□□□□□ -0.74
UBE2F-220ENST00000472479 OR56A4Q8NGH8 313 aa10.42□□□□□ -0.74
UBE2F-220ENST00000472479 DNASE2BQ8WZ79 361 aa10.42□□□□□ -0.74
UBE2F-220ENST00000472479 SGF29Q96ES7 293 aa10.42□□□□□ -0.74
UBE2F-220ENST00000472479 ELMO2Q96JJ3 720 aa10.42□□□□□ -0.74
UBE2F-220ENST00000472479 ZC3H10Q96K80 434 aaKnown RBP10.42□□□□□ -0.74
UBE2F-220ENST00000472479 CPNE1Q99829 537 aa10.42□□□□□ -0.74
UBE2F-220ENST00000472479 LGR4Q9BXB1 951 aa10.42□□□□□ -0.74
UBE2F-220ENST00000472479 TEX101Q9BY14 249 aa10.42□□□□□ -0.74
UBE2F-220ENST00000472479 TXLNGYQ9BZA5 131 aa10.42□□□□□ -0.74
UBE2F-220ENST00000472479 ACSS3Q9H6R3 686 aa10.42□□□□□ -0.74
UBE2F-220ENST00000472479 CYP4F12Q9HCS2 524 aa10.42□□□□□ -0.74
UBE2F-220ENST00000472479 SARS2Q9NP81 518 aaKnown RBP10.42□□□□□ -0.74
UBE2F-220ENST00000472479 SMOXQ9NWM0 555 aa10.42□□□□□ -0.74
UBE2F-220ENST00000472479 VPS18Q9P253 973 aa10.42□□□□□ -0.74
UBE2F-220ENST00000472479 SLC17A6Q9P2U8 582 aa10.42□□□□□ -0.74
UBE2F-220ENST00000472479 FAM8A1Q9UBU6 413 aa10.42□□□□□ -0.74
UBE2F-220ENST00000472479 KLQ9UEF7 1012 aa10.42□□□□□ -0.74
UBE2F-220ENST00000472479 PLAAQ9Y263 795 aa10.42□□□□□ -0.74
UBE2F-220ENST00000472479 GOLGA6L10A6NI86 522 aa10.41□□□□□ -0.74
UBE2F-220ENST00000472479 QSOX1O00391 747 aa10.41□□□□□ -0.74
UBE2F-220ENST00000472479 OR1I1O60431 355 aa10.41□□□□□ -0.74
UBE2F-220ENST00000472479 KRT38O76015 456 aa10.41□□□□□ -0.74
UBE2F-220ENST00000472479 S1PR4O95977 384 aa10.41□□□□□ -0.74
UBE2F-220ENST00000472479 AHSGP02765 367 aa10.41□□□□□ -0.74
UBE2F-220ENST00000472479 ITGB6P18564 788 aa10.41□□□□□ -0.74
UBE2F-220ENST00000472479 TRIM23P36406 574 aa10.41□□□□□ -0.74
UBE2F-220ENST00000472479 ABCG1P45844 678 aa10.41□□□□□ -0.74
UBE2F-220ENST00000472479 SLCO1A2P46721 670 aa10.41□□□□□ -0.74
UBE2F-220ENST00000472479 GNPDA1P46926 289 aa10.41□□□□□ -0.74
UBE2F-220ENST00000472479 SERPINB9P50453 376 aa10.41□□□□□ -0.74
UBE2F-220ENST00000472479 ATXN3P54252 364 aaPredicted RBP10.41□□□□□ -0.74
UBE2F-220ENST00000472479 KIAA1024LP59773 190 aa10.41□□□□□ -0.74
UBE2F-220ENST00000472479 PPARDQ03181 441 aa10.41□□□□□ -0.74
UBE2F-220ENST00000472479 ILF2Q12905 390 aaKnown RBP10.41□□□□□ -0.74
UBE2F-220ENST00000472479 DUOXA1Q1HG43 343 aa10.41□□□□□ -0.74
UBE2F-220ENST00000472479 BEND6Q5SZJ8 279 aaPredicted RBP10.41□□□□□ -0.74
UBE2F-220ENST00000472479 UBAP2Q5T6F2 1119 aaKnown RBP10.41□□□□□ -0.74
UBE2F-220ENST00000472479 FBXO38Q6PIJ6 1188 aa10.41□□□□□ -0.74
UBE2F-220ENST00000472479 CNSTQ6PJW8 725 aa10.41□□□□□ -0.74
UBE2F-220ENST00000472479 CRTC3Q6UUV7 619 aa10.41□□□□□ -0.74
UBE2F-220ENST00000472479 PACS1Q6VY07 963 aa10.41□□□□□ -0.74
UBE2F-220ENST00000472479 MREGQ8N565 214 aa10.41□□□□□ -0.74
UBE2F-220ENST00000472479 CLDN19Q8N6F1 224 aa10.41□□□□□ -0.74
UBE2F-220ENST00000472479 GOLGA6L1Q8N7Z2 621 aa10.41□□□□□ -0.74
UBE2F-220ENST00000472479 TMEM145Q8NBT3 493 aa10.41□□□□□ -0.74
UBE2F-220ENST00000472479 C2CD4AQ8NCU7 369 aaPredicted RBP10.41□□□□□ -0.74
UBE2F-220ENST00000472479 OR2W6PQ8NHA6 318 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms