RNA–Protein interactions for RNA: ENST00000472027.1

SYN3-211, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-211ENST00000472027 PROSER1Q86XN7 944 aa9.04□□□□□ -0.96
SYN3-211ENST00000472027 CCNJLQ8IV13 435 aa9.04□□□□□ -0.96
SYN3-211ENST00000472027 GLIS1Q8NBF1 620 aa9.04□□□□□ -0.96
SYN3-211ENST00000472027 OR13C4Q8NGS5 318 aa9.04□□□□□ -0.96
SYN3-211ENST00000472027 PDLIM2Q96JY6 352 aa9.04□□□□□ -0.96
SYN3-211ENST00000472027 TTC25Q96NG3 672 aa9.04□□□□□ -0.96
SYN3-211ENST00000472027 GFM1Q96RP9 751 aaKnown RBP9.04□□□□□ -0.96
SYN3-211ENST00000472027 SYNDIG1Q9H7V2 258 aa9.04□□□□□ -0.96
SYN3-211ENST00000472027 KLC4Q9NSK0 619 aa9.04□□□□□ -0.96
SYN3-211ENST00000472027 TRMT1Q9NXH9 659 aaKnown RBP9.04□□□□□ -0.96
SYN3-211ENST00000472027 PAK5Q9P286 719 aa9.04□□□□□ -0.96
SYN3-211ENST00000472027 DKK4Q9UBT3 224 aa9.04□□□□□ -0.96
SYN3-211ENST00000472027 TBC1D29Q9UFV1 150 aa9.04□□□□□ -0.96
SYN3-211ENST00000472027 SLC23A2Q9UGH3 650 aa9.04□□□□□ -0.96
SYN3-211ENST00000472027 FKBPLQ9UIM3 349 aa9.04□□□□□ -0.96
SYN3-211ENST00000472027 ZKSCAN5Q9Y2L8 839 aa9.04□□□□□ -0.96
SYN3-211ENST00000472027 ENTPD2Q9Y5L3 495 aa9.04□□□□□ -0.96
SYN3-211ENST00000472027 SRRM3A6NNA2 597 aaPredicted RBP9.03□□□□□ -0.96
SYN3-211ENST00000472027 SRP72O76094 671 aaKnown RBP9.03□□□□□ -0.96
SYN3-211ENST00000472027 PRAMEF1O95521 474 aa9.03□□□□□ -0.96
SYN3-211ENST00000472027 MPOP05164 745 aa9.03□□□□□ -0.96
SYN3-211ENST00000472027 ZNF7P17097 686 aaPredicted RBP9.03□□□□□ -0.96
SYN3-211ENST00000472027 ALDH4A1P30038 563 aa9.03□□□□□ -0.96
SYN3-211ENST00000472027 RPL22P35268 128 aaKnown RBP9.03□□□□□ -0.96
SYN3-211ENST00000472027 FDFT1P37268 417 aa9.03□□□□□ -0.96
SYN3-211ENST00000472027 HADHAP40939 763 aa9.03□□□□□ -0.96
SYN3-211ENST00000472027 KCNJ1P48048 391 aa9.03□□□□□ -0.96
SYN3-211ENST00000472027 LMAN1P49257 510 aa9.03□□□□□ -0.96
SYN3-211ENST00000472027 CLCNKAP51800 687 aa9.03□□□□□ -0.96
SYN3-211ENST00000472027 OR1D5P58170 312 aa9.03□□□□□ -0.96
SYN3-211ENST00000472027 GTF2H3Q13889 308 aa9.03□□□□□ -0.96
SYN3-211ENST00000472027 NR1D2Q14995 579 aa9.03□□□□□ -0.96
SYN3-211ENST00000472027 INSCQ1MX18 579 aa9.03□□□□□ -0.96
SYN3-211ENST00000472027 PLA2G4EQ3MJ16 856 aa9.03□□□□□ -0.96
SYN3-211ENST00000472027 LDLRAP1Q5SW96 308 aa9.03□□□□□ -0.96
SYN3-211ENST00000472027 GPRC6AQ5T6X5 926 aa9.03□□□□□ -0.96
SYN3-211ENST00000472027 IYDQ6PHW0 289 aa9.03□□□□□ -0.96
SYN3-211ENST00000472027 ZNF438Q7Z4V0 828 aa9.03□□□□□ -0.96
SYN3-211ENST00000472027 SPRED1Q7Z699 444 aa9.03□□□□□ -0.96
SYN3-211ENST00000472027 LINC00523Q86TU6 105 aa9.03□□□□□ -0.96
SYN3-211ENST00000472027 ZNF547Q8IVP9 402 aa9.03□□□□□ -0.96
SYN3-211ENST00000472027 SLC35F6Q8N357 371 aa9.03□□□□□ -0.96
SYN3-211ENST00000472027 RASGEF1CQ8N431 466 aa9.03□□□□□ -0.96
SYN3-211ENST00000472027 SFRP1Q8N474 314 aa9.03□□□□□ -0.96
SYN3-211ENST00000472027 CCDC89Q8N998 374 aa9.03□□□□□ -0.96
SYN3-211ENST00000472027 RASGEF1AQ8N9B8 481 aa9.03□□□□□ -0.96
SYN3-211ENST00000472027 DDHD1Q8NEL9 900 aa9.03□□□□□ -0.96
SYN3-211ENST00000472027 OR52K1Q8NGK4 314 aa9.03□□□□□ -0.96
SYN3-211ENST00000472027 SLC37A2Q8TED4 501 aa9.03□□□□□ -0.96
SYN3-211ENST00000472027 GRAMD1AQ96CP6 724 aa9.03□□□□□ -0.96
SYN3-211ENST00000472027 NXPE2Q96DL1 559 aa9.03□□□□□ -0.96
SYN3-211ENST00000472027 ATXN7L3BQ96GX2 97 aa9.03□□□□□ -0.96
SYN3-211ENST00000472027 MS4A14Q96JA4 679 aa9.03□□□□□ -0.96
SYN3-211ENST00000472027 PBKQ96KB5 322 aa9.03□□□□□ -0.96
SYN3-211ENST00000472027 C19orf43Q9BQ61 176 aa9.03□□□□□ -0.96
SYN3-211ENST00000472027 ASB8Q9H765 288 aa9.03□□□□□ -0.96
SYN3-211ENST00000472027 PRDM8Q9NQV8 689 aa9.03□□□□□ -0.96
SYN3-211ENST00000472027 RAB6BQ9NRW1 208 aa9.03□□□□□ -0.96
SYN3-211ENST00000472027 HOMER3Q9NSC5 361 aa9.03□□□□□ -0.96
SYN3-211ENST00000472027 PIH1D1Q9NWS0 290 aaKnown RBP9.03□□□□□ -0.96
SYN3-211ENST00000472027 ATXN7L1Q9ULK2 861 aaPredicted RBP9.03□□□□□ -0.96
SYN3-211ENST00000472027 SPTBN2O15020 2390 aa9.02□□□□□ -0.96
SYN3-211ENST00000472027 A6NCN8 305 aa9.02□□□□□ -0.97
SYN3-211ENST00000472027 OR5K4A6NMS3 321 aa9.02□□□□□ -0.97
SYN3-211ENST00000472027 ERI2A8K979 691 aaKnown RBP9.02□□□□□ -0.97
SYN3-211ENST00000472027 AGAP14A8MT82 685 aa9.02□□□□□ -0.97
SYN3-211ENST00000472027 E7EVH7 732 aa9.02□□□□□ -0.97
SYN3-211ENST00000472027 CCL22O00626 93 aa9.02□□□□□ -0.97
SYN3-211ENST00000472027 ZW10O43264 779 aa9.02□□□□□ -0.97
SYN3-211ENST00000472027 POP7O75817 140 aaKnown RBP9.02□□□□□ -0.97
SYN3-211ENST00000472027 SUN1O94901 812 aa9.02□□□□□ -0.97
SYN3-211ENST00000472027 F3P13726 295 aa9.02□□□□□ -0.97
SYN3-211ENST00000472027 GRIA1P42261 906 aa9.02□□□□□ -0.97
SYN3-211ENST00000472027 GPR3P46089 330 aa9.02□□□□□ -0.97
SYN3-211ENST00000472027 FASLGP48023 281 aa9.02□□□□□ -0.97
SYN3-211ENST00000472027 LSSP48449 732 aa9.02□□□□□ -0.97
SYN3-211ENST00000472027 ZNF140P52738 457 aaPredicted RBP9.02□□□□□ -0.97
SYN3-211ENST00000472027 PDX1P52945 283 aa9.02□□□□□ -0.97
SYN3-211ENST00000472027 CTSCP53634 463 aa9.02□□□□□ -0.97
SYN3-211ENST00000472027 CDH17Q12864 832 aa9.02□□□□□ -0.97
SYN3-211ENST00000472027 NFATC2Q13469 925 aa9.02□□□□□ -0.97
SYN3-211ENST00000472027 SEMA5AQ13591 1074 aa9.02□□□□□ -0.97
SYN3-211ENST00000472027 POU6F1Q14863 301 aa9.02□□□□□ -0.97
SYN3-211ENST00000472027 AMZ1Q400G9 498 aa9.02□□□□□ -0.97
SYN3-211ENST00000472027 TMEM220Q6QAJ8 160 aa9.02□□□□□ -0.97
SYN3-211ENST00000472027 C4orf22Q6V702 233 aa9.02□□□□□ -0.97
SYN3-211ENST00000472027 USP53Q70EK8 1073 aa9.02□□□□□ -0.97
SYN3-211ENST00000472027 GSTA5Q7RTV2 222 aa9.02□□□□□ -0.97
SYN3-211ENST00000472027 C11orf96Q7Z7L8 435 aa9.02□□□□□ -0.97
SYN3-211ENST00000472027 B3GNT8Q7Z7M8 397 aa9.02□□□□□ -0.97
SYN3-211ENST00000472027 SLC9B2Q86UD5 537 aa9.02□□□□□ -0.97
SYN3-211ENST00000472027 TRAPPC5Q8IUR0 188 aa9.02□□□□□ -0.97
SYN3-211ENST00000472027 PRELID2Q8N945 189 aa9.02□□□□□ -0.97
SYN3-211ENST00000472027 DNAAF3Q8N9W5 541 aa9.02□□□□□ -0.97
SYN3-211ENST00000472027 STYXQ8WUJ0 223 aa9.02□□□□□ -0.97
SYN3-211ENST00000472027 CDKN2AIPNLQ96HQ2 116 aa9.02□□□□□ -0.97
SYN3-211ENST00000472027 DNAJC1Q96KC8 554 aaKnown RBP9.02□□□□□ -0.97
SYN3-211ENST00000472027 TMEM74Q96NL1 305 aa9.02□□□□□ -0.97
SYN3-211ENST00000472027 SLC38A3Q99624 504 aa9.02□□□□□ -0.97
SYN3-211ENST00000472027 TIMM29Q9BSF4 260 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 231 ms