RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 CLDN20P56880 219 aa3.81□□□□□ -1.8
BRCA2-202ENST00000470094 TAS2R40P59535 323 aa3.81□□□□□ -1.8
BRCA2-202ENST00000470094 PLIN5Q00G26 463 aa3.81□□□□□ -1.8
BRCA2-202ENST00000470094 KRT32Q14532 448 aa3.81□□□□□ -1.8
BRCA2-202ENST00000470094 ZNF805Q5CZA5 627 aa3.81□□□□□ -1.8
BRCA2-202ENST00000470094 PDSS1Q5T2R2 415 aa3.81□□□□□ -1.8
BRCA2-202ENST00000470094 STXBP5Q5T5C0 1151 aa3.81□□□□□ -1.8
BRCA2-202ENST00000470094 GFI1BQ5VTD9 330 aa3.81□□□□□ -1.8
BRCA2-202ENST00000470094 CCDC30Q5VVM6 783 aa3.81□□□□□ -1.8
BRCA2-202ENST00000470094 SPATA1Q5VX52 437 aa3.81□□□□□ -1.8
BRCA2-202ENST00000470094 HAUS3Q68CZ6 603 aa3.81□□□□□ -1.8
BRCA2-202ENST00000470094 OR7E24Q6IFN5 339 aa3.81□□□□□ -1.8
BRCA2-202ENST00000470094 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.81□□□□□ -1.8
BRCA2-202ENST00000470094 GLDNQ6ZMI3 551 aaPredicted RBP3.81□□□□□ -1.8
BRCA2-202ENST00000470094 KCTD8Q6ZWB6 473 aa3.81□□□□□ -1.8
BRCA2-202ENST00000470094 TRMT1LQ7Z2T5 733 aaKnown RBP3.81□□□□□ -1.8
BRCA2-202ENST00000470094 SDCCAG8Q86SQ7 713 aaPredicted RBP3.81□□□□□ -1.8
BRCA2-202ENST00000470094 TMPRSS12Q86WS5 348 aa3.81□□□□□ -1.8
BRCA2-202ENST00000470094 POMGNT1Q8WZA1 660 aa3.81□□□□□ -1.8
BRCA2-202ENST00000470094 C1orf74Q96LT6 269 aa3.81□□□□□ -1.8
BRCA2-202ENST00000470094 ZNF583Q96ND8 569 aa3.81□□□□□ -1.8
BRCA2-202ENST00000470094 NCAPGQ9BPX3 1015 aa3.81□□□□□ -1.8
BRCA2-202ENST00000470094 CHCHD6Q9BRQ6 235 aa3.81□□□□□ -1.8
BRCA2-202ENST00000470094 POLR3CQ9BUI4 534 aaPredicted RBP3.81□□□□□ -1.8
BRCA2-202ENST00000470094 MUC13Q9H3R2 512 aa3.81□□□□□ -1.8
BRCA2-202ENST00000470094 MAGIXQ9H6Y5 334 aa3.81□□□□□ -1.8
BRCA2-202ENST00000470094 SDF2L1Q9HCN8 221 aa3.81□□□□□ -1.8
BRCA2-202ENST00000470094 KRT84Q9NSB2 600 aa3.81□□□□□ -1.8
BRCA2-202ENST00000470094 ZFP57Q9NU63 452 aa3.81□□□□□ -1.8
BRCA2-202ENST00000470094 TAAR2Q9P1P5 351 aa3.81□□□□□ -1.8
BRCA2-202ENST00000470094 RABGAP1Q9Y3P9 1069 aa3.81□□□□□ -1.8
BRCA2-202ENST00000470094 LAS1LQ9Y4W2 734 aaKnown RBP3.81□□□□□ -1.8
BRCA2-202ENST00000470094 WDR81Q562E7 1941 aa3.8□□□□□ -1.8
BRCA2-202ENST00000470094 A6NCN8 305 aa3.8□□□□□ -1.8
BRCA2-202ENST00000470094 H3BQ06 376 aaPredicted RBP3.8□□□□□ -1.8
BRCA2-202ENST00000470094 SCGB1D1O95968 90 aa3.8□□□□□ -1.8
BRCA2-202ENST00000470094 LAMP2P13473 410 aa3.8□□□□□ -1.8
BRCA2-202ENST00000470094 TMEM11P17152 192 aa3.8□□□□□ -1.8
BRCA2-202ENST00000470094 MARK3P27448 753 aa3.8□□□□□ -1.8
BRCA2-202ENST00000470094 PPARGP37231 505 aaPredicted RBP3.8□□□□□ -1.8
BRCA2-202ENST00000470094 HOXA1P49639 335 aaPredicted RBP3.8□□□□□ -1.8
BRCA2-202ENST00000470094 GALCP54803 685 aa3.8□□□□□ -1.8
BRCA2-202ENST00000470094 COG7P83436 770 aa3.8□□□□□ -1.8
BRCA2-202ENST00000470094 TOMM20Q15388 145 aa3.8□□□□□ -1.8
BRCA2-202ENST00000470094 ZSCAN23Q3MJ62 389 aa3.8□□□□□ -1.8
BRCA2-202ENST00000470094 SOWAHCQ53LP3 525 aaPredicted RBP3.8□□□□□ -1.8
BRCA2-202ENST00000470094 KRTCAP3Q53RY4 240 aa3.8□□□□□ -1.8
BRCA2-202ENST00000470094 LRIF1Q5T3J3 769 aa3.8□□□□□ -1.8
BRCA2-202ENST00000470094 FAM171BQ6P995 826 aa3.8□□□□□ -1.8
BRCA2-202ENST00000470094 SARM1Q6SZW1 724 aa3.8□□□□□ -1.8
BRCA2-202ENST00000470094 MEX3BQ6ZN04 569 aaKnown RBP3.8□□□□□ -1.8
BRCA2-202ENST00000470094 FASTKD5Q7L8L6 764 aaKnown RBP3.8□□□□□ -1.8
BRCA2-202ENST00000470094 NFE4Q86UQ8 179 aa3.8□□□□□ -1.8
BRCA2-202ENST00000470094 HACE1Q8IYU2 909 aa3.8□□□□□ -1.8
BRCA2-202ENST00000470094 CCDC89Q8N998 374 aa3.8□□□□□ -1.8
BRCA2-202ENST00000470094 HM13Q8TCT9 377 aa3.8□□□□□ -1.8
BRCA2-202ENST00000470094 LRRC8CQ8TDW0 803 aa3.8□□□□□ -1.8
BRCA2-202ENST00000470094 UTP15Q8TED0 518 aaKnown RBP3.8□□□□□ -1.8
BRCA2-202ENST00000470094 TMEM255BQ8WV15 326 aa3.8□□□□□ -1.8
BRCA2-202ENST00000470094 SLC44A1Q8WWI5 657 aa3.8□□□□□ -1.8
BRCA2-202ENST00000470094 NR4A3Q92570 626 aa3.8□□□□□ -1.8
BRCA2-202ENST00000470094 ZKSCAN4Q969J2 545 aaPredicted RBP3.8□□□□□ -1.8
BRCA2-202ENST00000470094 NEUROD6Q96NK8 337 aa3.8□□□□□ -1.8
BRCA2-202ENST00000470094 TREX2Q9BQ50 279 aaPredicted RBP3.8□□□□□ -1.8
BRCA2-202ENST00000470094 SH2D4AQ9H788 454 aa3.8□□□□□ -1.8
BRCA2-202ENST00000470094 FAF1Q9UNN5 650 aaPredicted RBP3.8□□□□□ -1.8
BRCA2-202ENST00000470094 GREB1LQ9C091 1923 aaPredicted RBP3.8□□□□□ -1.8
BRCA2-202ENST00000470094 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.79□□□□□ -1.8
BRCA2-202ENST00000470094 ZCWPW2A0A1B0GU75 182 aa3.79□□□□□ -1.8
BRCA2-202ENST00000470094 ANKRD18BA2A2Z9 1011 aa3.79□□□□□ -1.8
BRCA2-202ENST00000470094 OR5K3A6NET4 321 aa3.79□□□□□ -1.8
BRCA2-202ENST00000470094 PGPEP1LA6NFU8 196 aa3.79□□□□□ -1.8
BRCA2-202ENST00000470094 K7ENM7 598 aa3.79□□□□□ -1.8
BRCA2-202ENST00000470094 MAP2K7O14733 419 aa3.79□□□□□ -1.8
BRCA2-202ENST00000470094 SCAMP1O15126 338 aa3.79□□□□□ -1.8
BRCA2-202ENST00000470094 KCNK5O95279 499 aa3.79□□□□□ -1.8
BRCA2-202ENST00000470094 ICAM1P05362 532 aa3.79□□□□□ -1.8
BRCA2-202ENST00000470094 SP1P08047 785 aa3.79□□□□□ -1.8
BRCA2-202ENST00000470094 ANOS1P23352 680 aa3.79□□□□□ -1.8
BRCA2-202ENST00000470094 PRAMEP78395 509 aa3.79□□□□□ -1.8
BRCA2-202ENST00000470094 SETQ01105 290 aaPredicted RBP3.79□□□□□ -1.8
BRCA2-202ENST00000470094 SREBF2Q12772 1141 aa3.79□□□□□ -1.8
BRCA2-202ENST00000470094 MAMLD1Q13495 774 aa3.79□□□□□ -1.8
BRCA2-202ENST00000470094 SIRPB2Q5JXA9 342 aa3.79□□□□□ -1.8
BRCA2-202ENST00000470094 NSUN5P2Q63ZY6 315 aa3.79□□□□□ -1.8
BRCA2-202ENST00000470094 ACSM2BQ68CK6 577 aa3.79□□□□□ -1.8
BRCA2-202ENST00000470094 LCN10Q6JVE6 187 aa3.79□□□□□ -1.8
BRCA2-202ENST00000470094 TMEM154Q6P9G4 183 aa3.79□□□□□ -1.8
BRCA2-202ENST00000470094 C19orf48Q6RUI8 117 aa3.79□□□□□ -1.8
BRCA2-202ENST00000470094 C16orf54Q6UWD8 224 aa3.79□□□□□ -1.8
BRCA2-202ENST00000470094 RAD9BQ6WBX8 426 aa3.79□□□□□ -1.8
BRCA2-202ENST00000470094 ZNF852Q6ZMS4 543 aa3.79□□□□□ -1.8
BRCA2-202ENST00000470094 PLEKHM3Q6ZWE6 761 aa3.79□□□□□ -1.8
BRCA2-202ENST00000470094 SLC26A9Q7LBE3 791 aa3.79□□□□□ -1.8
BRCA2-202ENST00000470094 NGEFQ8N5V2 710 aa3.79□□□□□ -1.8
BRCA2-202ENST00000470094 ANKRD52Q8NB46 1076 aa3.79□□□□□ -1.8
BRCA2-202ENST00000470094 SLC24A4Q8NFF2 622 aa3.79□□□□□ -1.8
BRCA2-202ENST00000470094 OR8K5Q8NH50 307 aa3.79□□□□□ -1.8
BRCA2-202ENST00000470094 OR52I2Q8NH67 350 aa3.79□□□□□ -1.8
BRCA2-202ENST00000470094 PPP4R1Q8TF05 950 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms