RNA–Protein interactions for RNA: ENST00000470056.5

GAPVD1-215, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5 BASIC

Gene GAPVD1, Length 8,923 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-215ENST00000470056 AKAP14Q86UN6 197 aa6.95□□□□□ -1.3
GAPVD1-215ENST00000470056 C10orf107Q8IVU9 208 aa6.95□□□□□ -1.3
GAPVD1-215ENST00000470056 ITPKCQ96DU7 683 aa6.95□□□□□ -1.3
GAPVD1-215ENST00000470056 HIST1H2AHQ96KK5 128 aa6.95□□□□□ -1.3
GAPVD1-215ENST00000470056 HIST1H2AJQ99878 128 aa6.95□□□□□ -1.3
GAPVD1-215ENST00000470056 H2AFJQ9BTM1 129 aa6.95□□□□□ -1.3
GAPVD1-215ENST00000470056 EBF2Q9HAK2 575 aa6.95□□□□□ -1.3
GAPVD1-215ENST00000470056 CFAP97Q9P2B7 532 aa6.95□□□□□ -1.3
GAPVD1-215ENST00000470056 TAF4O00268 1085 aa6.95□□□□□ -1.3
GAPVD1-215ENST00000470056 CTBP1Q13363 440 aa6.95□□□□□ -1.3
GAPVD1-215ENST00000470056 ATP1A4Q13733 1029 aa6.95□□□□□ -1.3
GAPVD1-215ENST00000470056 GPNMBQ14956 572 aa6.95□□□□□ -1.3
GAPVD1-215ENST00000470056 TBCELQ5QJ74 424 aa6.95□□□□□ -1.3
GAPVD1-215ENST00000470056 RSPO2Q6UXX9 243 aaPredicted RBP6.95□□□□□ -1.3
GAPVD1-215ENST00000470056 ZNF683Q8IZ20 524 aa6.95□□□□□ -1.3
GAPVD1-215ENST00000470056 CPXM2Q8N436 756 aa6.95□□□□□ -1.3
GAPVD1-215ENST00000470056 ARRDC2Q8TBH0 407 aa6.95□□□□□ -1.3
GAPVD1-215ENST00000470056 BHMTQ93088 406 aa6.95□□□□□ -1.3
GAPVD1-215ENST00000470056 HDAC10Q969S8 669 aa6.95□□□□□ -1.3
GAPVD1-215ENST00000470056 FOPNLQ96NB1 174 aa6.95□□□□□ -1.3
GAPVD1-215ENST00000470056 ATP13A3Q9H7F0 1226 aa6.95□□□□□ -1.3
GAPVD1-215ENST00000470056 RAD18Q9NS91 495 aa6.95□□□□□ -1.3
GAPVD1-215ENST00000470056 LNPEPQ9UIQ6 1025 aa6.95□□□□□ -1.3
GAPVD1-215ENST00000470056 RAI2Q9Y5P3 530 aa6.95□□□□□ -1.3
GAPVD1-215ENST00000470056 C1orf232A0A0U1RR37 186 aa6.95□□□□□ -1.3
GAPVD1-215ENST00000470056 LOC100653049A0A140TA62 436 aa6.95□□□□□ -1.3
GAPVD1-215ENST00000470056 UBA6A0AVT1 1052 aaPredicted RBP6.95□□□□□ -1.3
GAPVD1-215ENST00000470056 IDH3BO43837 385 aa6.95□□□□□ -1.3
GAPVD1-215ENST00000470056 NPHS1O60500 1241 aa6.95□□□□□ -1.3
GAPVD1-215ENST00000470056 KRT34O76011 436 aa6.95□□□□□ -1.3
GAPVD1-215ENST00000470056 GJB5O95377 273 aa6.95□□□□□ -1.3
GAPVD1-215ENST00000470056 CTNNB1P35222 781 aa6.95□□□□□ -1.3
GAPVD1-215ENST00000470056 CSHL1Q14406 222 aa6.95□□□□□ -1.3
GAPVD1-215ENST00000470056 NR1D2Q14995 579 aa6.95□□□□□ -1.3
GAPVD1-215ENST00000470056 THEMIS2Q5TEJ8 643 aa6.95□□□□□ -1.3
GAPVD1-215ENST00000470056 TTC23LQ6PF05 361 aa6.95□□□□□ -1.3
GAPVD1-215ENST00000470056 CERS6Q6ZMG9 384 aa6.95□□□□□ -1.3
GAPVD1-215ENST00000470056 TAS2R42Q7RTR8 314 aa6.95□□□□□ -1.3
GAPVD1-215ENST00000470056 CIR1Q86X95 450 aaPredicted RBP6.95□□□□□ -1.3
GAPVD1-215ENST00000470056 SLC41A1Q8IVJ1 513 aa6.95□□□□□ -1.3
GAPVD1-215ENST00000470056 GPR150Q8NGU9 434 aa6.95□□□□□ -1.3
GAPVD1-215ENST00000470056 BCL7CQ8WUZ0 217 aaPredicted RBP6.95□□□□□ -1.3
GAPVD1-215ENST00000470056 NSMCE2Q96MF7 247 aa6.95□□□□□ -1.3
GAPVD1-215ENST00000470056 EGFL8Q99944 293 aa6.95□□□□□ -1.3
GAPVD1-215ENST00000470056 LBHD1Q9BQE6 289 aaPredicted RBP6.95□□□□□ -1.3
GAPVD1-215ENST00000470056 FBXO6Q9NRD1 293 aaPredicted RBP6.95□□□□□ -1.3
GAPVD1-215ENST00000470056 TMEM216Q9P0N5 145 aa6.95□□□□□ -1.3
GAPVD1-215ENST00000470056 CHKBQ9Y259 395 aa6.95□□□□□ -1.3
GAPVD1-215ENST00000470056 SEC24AO95486 1093 aa6.95□□□□□ -1.3
GAPVD1-215ENST00000470056 HMGA1P17096 107 aaKnown RBP6.95□□□□□ -1.3
GAPVD1-215ENST00000470056 SNRPD1P62314 119 aaKnown RBP6.95□□□□□ -1.3
GAPVD1-215ENST00000470056 RPS24P62847 133 aaKnown RBP6.95□□□□□ -1.3
GAPVD1-215ENST00000470056 MFSD4BQ5TF39 518 aa6.95□□□□□ -1.3
GAPVD1-215ENST00000470056 C16orf46Q6P387 395 aa6.95□□□□□ -1.3
GAPVD1-215ENST00000470056 CDHR3Q6ZTQ4 885 aa6.95□□□□□ -1.3
GAPVD1-215ENST00000470056 TMEM173Q86WV6 379 aaPredicted RBP6.95□□□□□ -1.3
GAPVD1-215ENST00000470056 ZDHHC13Q8IUH4 622 aa6.95□□□□□ -1.3
GAPVD1-215ENST00000470056 CRIPAKQ8N1N5 446 aa6.95□□□□□ -1.3
GAPVD1-215ENST00000470056 RAB42Q8N4Z0 105 aa6.95□□□□□ -1.3
GAPVD1-215ENST00000470056 MYO19Q96H55 970 aa6.95□□□□□ -1.3
GAPVD1-215ENST00000470056 NDFIP2Q9NV92 336 aa6.95□□□□□ -1.3
GAPVD1-215ENST00000470056 XPR1Q9UBH6 696 aa6.95□□□□□ -1.3
GAPVD1-215ENST00000470056 TRMT6Q9UJA5 497 aaKnown RBP6.95□□□□□ -1.3
GAPVD1-215ENST00000470056 EIF4E1BA6NMX2 242 aaKnown RBP6.94□□□□□ -1.3
GAPVD1-215ENST00000470056 TEX28O15482 410 aa6.94□□□□□ -1.3
GAPVD1-215ENST00000470056 HNRNPA1P09651 372 aaKnown RBP eCLIP6.94□□□□□ -1.3
GAPVD1-215ENST00000470056 NUP62P37198 522 aaPredicted RBP6.94□□□□□ -1.3
GAPVD1-215ENST00000470056 HECTD2Q5U5R9 776 aa6.94□□□□□ -1.3
GAPVD1-215ENST00000470056 NADSYN1Q6IA69 706 aa6.94□□□□□ -1.3
GAPVD1-215ENST00000470056 C16orf59Q7L2K0 433 aa6.94□□□□□ -1.3
GAPVD1-215ENST00000470056 PHOSPHO2Q8TCD6 241 aa6.94□□□□□ -1.3
GAPVD1-215ENST00000470056 MYDGFQ969H8 173 aa6.94□□□□□ -1.3
GAPVD1-215ENST00000470056 OSBPL10Q9BXB5 764 aa6.94□□□□□ -1.3
GAPVD1-215ENST00000470056 CDH19Q9H159 772 aa6.94□□□□□ -1.3
GAPVD1-215ENST00000470056 NOL6Q9H6R4 1146 aaKnown RBP6.94□□□□□ -1.3
GAPVD1-215ENST00000470056 NDUFAF1Q9Y375 327 aa6.94□□□□□ -1.3
GAPVD1-215ENST00000470056 CCT8P50990 548 aa6.94□□□□□ -1.3
GAPVD1-215ENST00000470056 SLC7A9P82251 487 aa6.94□□□□□ -1.3
GAPVD1-215ENST00000470056 SLC5A9Q2M3M2 681 aa6.94□□□□□ -1.3
GAPVD1-215ENST00000470056 TYSND1Q2T9J0 566 aa6.94□□□□□ -1.3
GAPVD1-215ENST00000470056 STON2Q8WXE9 905 aa6.94□□□□□ -1.3
GAPVD1-215ENST00000470056 OTUB2Q96DC9 234 aa6.94□□□□□ -1.3
GAPVD1-215ENST00000470056 MAGEB10Q96LZ2 347 aaPredicted RBP6.94□□□□□ -1.3
GAPVD1-215ENST00000470056 RAD9AQ99638 391 aa6.94□□□□□ -1.3
GAPVD1-215ENST00000470056 MECRQ9BV79 373 aa6.94□□□□□ -1.3
GAPVD1-215ENST00000470056 CD320Q9NPF0 282 aa6.94□□□□□ -1.3
GAPVD1-215ENST00000470056 TRIP12Q14669 1992 aaPredicted RBP6.94□□□□□ -1.3
GAPVD1-215ENST00000470056 PLK4O00444 970 aa6.94□□□□□ -1.3
GAPVD1-215ENST00000470056 GRM6O15303 877 aa6.94□□□□□ -1.3
GAPVD1-215ENST00000470056 TM7SF2O76062 418 aa6.94□□□□□ -1.3
GAPVD1-215ENST00000470056 AHSGP02765 367 aa6.94□□□□□ -1.3
GAPVD1-215ENST00000470056 PTPN2P17706 415 aa6.94□□□□□ -1.3
GAPVD1-215ENST00000470056 GRIA4P48058 902 aa6.94□□□□□ -1.3
GAPVD1-215ENST00000470056 MPP1Q00013 466 aa6.94□□□□□ -1.3
GAPVD1-215ENST00000470056 PCLAFQ15004 111 aa6.94□□□□□ -1.3
GAPVD1-215ENST00000470056 CLEC14AQ86T13 490 aa6.94□□□□□ -1.3
GAPVD1-215ENST00000470056 CILP2Q8IUL8 1156 aa6.94□□□□□ -1.3
GAPVD1-215ENST00000470056 ARL14EPQ8N8R7 260 aaPredicted RBP6.94□□□□□ -1.3
GAPVD1-215ENST00000470056 KCTD4Q8WVF5 259 aa6.94□□□□□ -1.3
GAPVD1-215ENST00000470056 ASIC4Q96FT7 647 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms