RNA–Protein interactions for RNA: ENST00000469415.1

MCF2L-221, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 3,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-221ENST00000469415 IL37Q9NZH6 218 aa17.69■□□□□ 0.42
MCF2L-221ENST00000469415 RANBP2P49792 3224 aaKnown RBP17.68■□□□□ 0.42
MCF2L-221ENST00000469415 RNF103-CHMP3A0A140T963 221 aa17.68■□□□□ 0.42
MCF2L-221ENST00000469415 SYNCRIPO60506 623 aaKnown RBP17.68■□□□□ 0.42
MCF2L-221ENST00000469415 CST5P28325 142 aaPredicted RBP17.68■□□□□ 0.42
MCF2L-221ENST00000469415 DGKQP52824 942 aa17.68■□□□□ 0.42
MCF2L-221ENST00000469415 IL2P60568 153 aa17.68■□□□□ 0.42
MCF2L-221ENST00000469415 RHDQ02161 417 aa17.68■□□□□ 0.42
MCF2L-221ENST00000469415 CDH18Q13634 790 aa17.68■□□□□ 0.42
MCF2L-221ENST00000469415 SLC44A4Q53GD3 710 aa17.68■□□□□ 0.42
MCF2L-221ENST00000469415 CTSL3PQ5NE16 218 aa17.68■□□□□ 0.42
MCF2L-221ENST00000469415 LHX8Q68G74 356 aa17.68■□□□□ 0.42
MCF2L-221ENST00000469415 HMBOX1Q6NT76 420 aa17.68■□□□□ 0.42
MCF2L-221ENST00000469415 AFTPHQ6ULP2 937 aa17.68■□□□□ 0.42
MCF2L-221ENST00000469415 KIAA1191Q96A73 305 aa17.68■□□□□ 0.42
MCF2L-221ENST00000469415 EID2BQ96D98 161 aa17.68■□□□□ 0.42
MCF2L-221ENST00000469415 PPM1MQ96MI6 270 aa17.68■□□□□ 0.42
MCF2L-221ENST00000469415 PLEKHG4BQ96PX9 1271 aa17.68■□□□□ 0.42
MCF2L-221ENST00000469415 EGFL8Q99944 293 aa17.68■□□□□ 0.42
MCF2L-221ENST00000469415 INTS7Q9NVH2 962 aaKnown RBP17.68■□□□□ 0.42
MCF2L-221ENST00000469415 CMTM6Q9NX76 183 aa17.68■□□□□ 0.42
MCF2L-221ENST00000469415 SLC30A1Q9Y6M5 507 aa17.68■□□□□ 0.42
MCF2L-221ENST00000469415 ARHGAP10A1A4S6 786 aa17.68■□□□□ 0.42
MCF2L-221ENST00000469415 TRIM24O15164 1050 aa17.68■□□□□ 0.42
MCF2L-221ENST00000469415 PCNAP12004 261 aa17.68■□□□□ 0.42
MCF2L-221ENST00000469415 RING1Q06587 406 aa17.68■□□□□ 0.42
MCF2L-221ENST00000469415 SLC5A9Q2M3M2 681 aa17.68■□□□□ 0.42
MCF2L-221ENST00000469415 NADK2Q4G0N4 442 aa17.68■□□□□ 0.42
MCF2L-221ENST00000469415 PTRHD1Q6GMV3 140 aaKnown RBP17.68■□□□□ 0.42
MCF2L-221ENST00000469415 IL27RAQ6UWB1 636 aa17.68■□□□□ 0.42
MCF2L-221ENST00000469415 MBOAT1Q6ZNC8 495 aa17.68■□□□□ 0.42
MCF2L-221ENST00000469415 METTL6Q8TCB7 284 aa17.68■□□□□ 0.42
MCF2L-221ENST00000469415 SEPT8Q92599 483 aa17.68■□□□□ 0.42
MCF2L-221ENST00000469415 TRMOQ9BU70 441 aa17.68■□□□□ 0.42
MCF2L-221ENST00000469415 KDELR3O43731 214 aa17.67■□□□□ 0.42
MCF2L-221ENST00000469415 KERAO60938 352 aa17.67■□□□□ 0.42
MCF2L-221ENST00000469415 WISP3O95389 354 aaPredicted RBP17.67■□□□□ 0.42
MCF2L-221ENST00000469415 HTRA3P83110 453 aa17.67■□□□□ 0.42
MCF2L-221ENST00000469415 NPAS4Q8IUM7 802 aa17.67■□□□□ 0.42
MCF2L-221ENST00000469415 DDI1Q8WTU0 396 aa17.67■□□□□ 0.42
MCF2L-221ENST00000469415 TADA1Q96BN2 335 aa17.67■□□□□ 0.42
MCF2L-221ENST00000469415 VN1R3Q9BXE9 311 aa17.67■□□□□ 0.42
MCF2L-221ENST00000469415 LIN28AQ9H9Z2 209 aaKnown RBP17.67■□□□□ 0.42
MCF2L-221ENST00000469415 ZNHIT2Q9UHR6 403 aa17.67■□□□□ 0.42
MCF2L-221ENST00000469415 CLEC4EQ9ULY5 219 aa17.67■□□□□ 0.42
MCF2L-221ENST00000469415 KIAA0100Q14667 2235 aaKnown RBP17.67■□□□□ 0.42
MCF2L-221ENST00000469415 SOCS2O14508 198 aa17.67■□□□□ 0.42
MCF2L-221ENST00000469415 SLC22A2O15244 555 aa17.67■□□□□ 0.42
MCF2L-221ENST00000469415 CLDN11O75508 207 aa17.67■□□□□ 0.42
MCF2L-221ENST00000469415 PYGLP06737 847 aa17.67■□□□□ 0.42
MCF2L-221ENST00000469415 GNAO1P09471 354 aa17.67■□□□□ 0.42
MCF2L-221ENST00000469415 CSKP41240 450 aa17.67■□□□□ 0.42
MCF2L-221ENST00000469415 HSPA7P48741 367 aa17.67■□□□□ 0.42
MCF2L-221ENST00000469415 INHBCP55103 352 aa17.67■□□□□ 0.42
MCF2L-221ENST00000469415 TAF1AQ15573 450 aaPredicted RBP17.67■□□□□ 0.42
MCF2L-221ENST00000469415 CYP51A1Q16850 503 aa17.67■□□□□ 0.42
MCF2L-221ENST00000469415 SLC2A7Q6PXP3 512 aa17.67■□□□□ 0.42
MCF2L-221ENST00000469415 APCDD1Q8J025 514 aa17.67■□□□□ 0.42
MCF2L-221ENST00000469415 CBR4Q8N4T8 237 aa17.67■□□□□ 0.42
MCF2L-221ENST00000469415 METTL25Q8N6Q8 603 aa17.67■□□□□ 0.42
MCF2L-221ENST00000469415 ADCY4Q8NFM4 1077 aa17.67■□□□□ 0.42
MCF2L-221ENST00000469415 CLHC1Q8NHS4 586 aa17.67■□□□□ 0.42
MCF2L-221ENST00000469415 CLSTN3Q9BQT9 956 aa17.67■□□□□ 0.42
MCF2L-221ENST00000469415 CIPCQ9C0C6 399 aa17.67■□□□□ 0.42
MCF2L-221ENST00000469415 TFB2MQ9H5Q4 396 aaKnown RBP17.67■□□□□ 0.42
MCF2L-221ENST00000469415 NSUN3Q9H649 340 aaKnown RBP17.67■□□□□ 0.42
MCF2L-221ENST00000469415 NUP214P35658 2090 aaPredicted RBP17.67■□□□□ 0.42
MCF2L-221ENST00000469415 H7C4K7 107 aa17.66■□□□□ 0.42
MCF2L-221ENST00000469415 TFAP2AP05549 437 aa17.66■□□□□ 0.42
MCF2L-221ENST00000469415 FESP07332 822 aa17.66■□□□□ 0.42
MCF2L-221ENST00000469415 CAPN1P07384 714 aa17.66■□□□□ 0.42
MCF2L-221ENST00000469415 FAM58BPP0C7Q3 252 aa17.66■□□□□ 0.42
MCF2L-221ENST00000469415 SMIM18P0DKX4 95 aa17.66■□□□□ 0.42
MCF2L-221ENST00000469415 ZNF26P17031 533 aaPredicted RBP17.66■□□□□ 0.42
MCF2L-221ENST00000469415 DNAJB1P25685 340 aa17.66■□□□□ 0.42
MCF2L-221ENST00000469415 KCNK10P57789 538 aa17.66■□□□□ 0.42
MCF2L-221ENST00000469415 ZXDBP98169 803 aa17.66■□□□□ 0.42
MCF2L-221ENST00000469415 CYP4F8P98187 520 aa17.66■□□□□ 0.42
MCF2L-221ENST00000469415 PPP1R8Q12972 351 aaKnown RBP17.66■□□□□ 0.42
MCF2L-221ENST00000469415 RFTN1Q14699 578 aaPredicted RBP17.66■□□□□ 0.42
MCF2L-221ENST00000469415 ADGRF1Q5T601 910 aa17.66■□□□□ 0.42
MCF2L-221ENST00000469415 PBXIP1Q96AQ6 731 aa17.66■□□□□ 0.42
MCF2L-221ENST00000469415 BTBD9Q96Q07 612 aa17.66■□□□□ 0.42
MCF2L-221ENST00000469415 C17orf80Q9BSJ5 609 aa17.66■□□□□ 0.42
MCF2L-221ENST00000469415 ZFP14Q9HCL3 533 aa17.66■□□□□ 0.42
MCF2L-221ENST00000469415 FNIP2Q9P278 1114 aa17.66■□□□□ 0.42
MCF2L-221ENST00000469415 HMGA1P17096 107 aaKnown RBP17.66■□□□□ 0.42
MCF2L-221ENST00000469415 IKBKEQ14164 716 aa17.66■□□□□ 0.42
MCF2L-221ENST00000469415 CXorf57Q6NSI4 855 aaKnown RBP17.66■□□□□ 0.42
MCF2L-221ENST00000469415 CD200R1Q8TD46 325 aa17.66■□□□□ 0.42
MCF2L-221ENST00000469415 DLG3Q92796 817 aa17.66■□□□□ 0.42
MCF2L-221ENST00000469415 TMIGD2Q96BF3 282 aa17.66■□□□□ 0.42
MCF2L-221ENST00000469415 LRRC58Q96CX6 371 aa17.66■□□□□ 0.42
MCF2L-221ENST00000469415 TMEM181Q9P2C4 612 aa17.66■□□□□ 0.42
MCF2L-221ENST00000469415 SUCOQ9UBS9 1254 aaKnown RBP17.66■□□□□ 0.42
MCF2L-221ENST00000469415 CIDEBQ9UHD4 219 aa17.66■□□□□ 0.42
MCF2L-221ENST00000469415 PKP3Q9Y446 797 aa17.66■□□□□ 0.42
MCF2L-221ENST00000469415 C1orf232A0A0U1RR37 186 aa17.66■□□□□ 0.42
MCF2L-221ENST00000469415 A0A1B0GVM2 712 aa17.66■□□□□ 0.42
MCF2L-221ENST00000469415 LCHNA4D1U4 455 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms