RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 ANKMY1Q9P2S6 941 aa12.1□□□□□ -0.47
HDAC3-204ENST00000469207 TUBD1Q9UJT1 453 aa12.1□□□□□ -0.47
HDAC3-204ENST00000469207 PLAAQ9Y263 795 aa12.1□□□□□ -0.47
HDAC3-204ENST00000469207 RPS6KL1Q9Y6S9 549 aa12.1□□□□□ -0.47
HDAC3-204ENST00000469207 KIR2DS5A0A0G2JLQ3 304 aa12.09□□□□□ -0.47
HDAC3-204ENST00000469207 A0A0G2JNG1 304 aa12.09□□□□□ -0.47
HDAC3-204ENST00000469207 KIR2DS3K7RE56 304 aa12.09□□□□□ -0.47
HDAC3-204ENST00000469207 AURKAO14965 403 aa12.09□□□□□ -0.47
HDAC3-204ENST00000469207 CAPN5O15484 640 aaPredicted RBP12.09□□□□□ -0.47
HDAC3-204ENST00000469207 C9P02748 559 aa12.09□□□□□ -0.47
HDAC3-204ENST00000469207 BRAFP15056 766 aa12.09□□□□□ -0.47
HDAC3-204ENST00000469207 AMD1P17707 334 aa12.09□□□□□ -0.47
HDAC3-204ENST00000469207 XRCC1P18887 633 aaPredicted RBP12.09□□□□□ -0.47
HDAC3-204ENST00000469207 DLSTP36957 453 aa12.09□□□□□ -0.47
HDAC3-204ENST00000469207 STAT5AP42229 794 aa12.09□□□□□ -0.47
HDAC3-204ENST00000469207 EPHA4P54764 986 aa12.09□□□□□ -0.47
HDAC3-204ENST00000469207 DRG2P55039 364 aaKnown RBP12.09□□□□□ -0.47
HDAC3-204ENST00000469207 FANCCQ00597 558 aa12.09□□□□□ -0.47
HDAC3-204ENST00000469207 KIR2DS5Q14953 304 aa12.09□□□□□ -0.47
HDAC3-204ENST00000469207 PCSK7Q16549 785 aa12.09□□□□□ -0.47
HDAC3-204ENST00000469207 FIGNQ5HY92 759 aa12.09□□□□□ -0.47
HDAC3-204ENST00000469207 ZFYVE27Q5T4F4 411 aa12.09□□□□□ -0.47
HDAC3-204ENST00000469207 NPNTQ6UXI9 565 aa12.09□□□□□ -0.47
HDAC3-204ENST00000469207 TMEM26Q6ZUK4 368 aa12.09□□□□□ -0.47
HDAC3-204ENST00000469207 APOBEC4Q8WW27 367 aaKnown RBP12.09□□□□□ -0.47
HDAC3-204ENST00000469207 RSC1A1Q92681 617 aa12.09□□□□□ -0.47
HDAC3-204ENST00000469207 FAF2Q96CS3 445 aa12.09□□□□□ -0.47
HDAC3-204ENST00000469207 AGAP3Q96P47 875 aa12.09□□□□□ -0.47
HDAC3-204ENST00000469207 RNF157Q96PX1 679 aa12.09□□□□□ -0.47
HDAC3-204ENST00000469207 OR6C1Q96RD1 312 aa12.09□□□□□ -0.47
HDAC3-204ENST00000469207 TRIB3Q96RU7 358 aa12.09□□□□□ -0.47
HDAC3-204ENST00000469207 ZNF670Q9BS34 389 aa12.09□□□□□ -0.47
HDAC3-204ENST00000469207 ZPBPQ9BS86 351 aa12.09□□□□□ -0.47
HDAC3-204ENST00000469207 HERPUD2Q9BSE4 406 aa12.09□□□□□ -0.47
HDAC3-204ENST00000469207 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.09□□□□□ -0.47
HDAC3-204ENST00000469207 STN1Q9H668 368 aaKnown RBP12.09□□□□□ -0.47
HDAC3-204ENST00000469207 RMI1Q9H9A7 625 aa12.09□□□□□ -0.47
HDAC3-204ENST00000469207 ZFYVE1Q9HBF4 777 aa12.09□□□□□ -0.47
HDAC3-204ENST00000469207 TRIM39Q9HCM9 518 aa12.09□□□□□ -0.47
HDAC3-204ENST00000469207 BPIFA1Q9NP55 256 aa12.09□□□□□ -0.47
HDAC3-204ENST00000469207 CTTNBP2NLQ9P2B4 639 aa12.09□□□□□ -0.47
HDAC3-204ENST00000469207 CROTQ9UKG9 612 aa12.09□□□□□ -0.47
HDAC3-204ENST00000469207 TMPRSS11EQ9UL52 423 aa12.09□□□□□ -0.47
HDAC3-204ENST00000469207 TP53TG5Q9Y2B4 290 aa12.09□□□□□ -0.47
HDAC3-204ENST00000469207 HEY1Q9Y5J3 304 aa12.09□□□□□ -0.47
HDAC3-204ENST00000469207 FLNCQ14315 2725 aa12.09□□□□□ -0.47
HDAC3-204ENST00000469207 NBPF19A0A087WUL8 3843 aa12.08□□□□□ -0.48
HDAC3-204ENST00000469207 PRR19A6NJB7 356 aa12.08□□□□□ -0.48
HDAC3-204ENST00000469207 OR5K4A6NMS3 321 aa12.08□□□□□ -0.48
HDAC3-204ENST00000469207 OR52A4PA6NMU1 304 aa12.08□□□□□ -0.48
HDAC3-204ENST00000469207 GOLGA6L22H0YM25 854 aa12.08□□□□□ -0.48
HDAC3-204ENST00000469207 MTSS1O43312 755 aa12.08□□□□□ -0.48
HDAC3-204ENST00000469207 KATNA1O75449 491 aa12.08□□□□□ -0.48
HDAC3-204ENST00000469207 KIAA0754O94854 1291 aa12.08□□□□□ -0.48
HDAC3-204ENST00000469207 UBXN7O94888 489 aa12.08□□□□□ -0.48
HDAC3-204ENST00000469207 PROSCO94903 275 aa12.08□□□□□ -0.48
HDAC3-204ENST00000469207 MBD3O95983 291 aa12.08□□□□□ -0.48
HDAC3-204ENST00000469207 VIPP01282 170 aa12.08□□□□□ -0.48
HDAC3-204ENST00000469207 KDELR1P24390 212 aa12.08□□□□□ -0.48
HDAC3-204ENST00000469207 CA5AP35218 305 aa12.08□□□□□ -0.48
HDAC3-204ENST00000469207 MLLT10P55197 1068 aa12.08□□□□□ -0.48
HDAC3-204ENST00000469207 RPL26P61254 145 aaKnown RBP12.08□□□□□ -0.48
HDAC3-204ENST00000469207 PPP1CAP62136 330 aa12.08□□□□□ -0.48
HDAC3-204ENST00000469207 PDK2Q15119 407 aa12.08□□□□□ -0.48
HDAC3-204ENST00000469207 INSCQ1MX18 579 aa12.08□□□□□ -0.48
HDAC3-204ENST00000469207 CAVIN1Q6NZI2 390 aaKnown RBP12.08□□□□□ -0.48
HDAC3-204ENST00000469207 FAM92BQ6ZTR7 304 aa12.08□□□□□ -0.48
HDAC3-204ENST00000469207 TMC3Q7Z5M5 1100 aa12.08□□□□□ -0.48
HDAC3-204ENST00000469207 LUZP1Q86V48 1076 aa12.08□□□□□ -0.48
HDAC3-204ENST00000469207 PLXDC1Q8IUK5 500 aa12.08□□□□□ -0.48
HDAC3-204ENST00000469207 PHYKPLQ8IUZ5 450 aa12.08□□□□□ -0.48
HDAC3-204ENST00000469207 ZNF547Q8IVP9 402 aa12.08□□□□□ -0.48
HDAC3-204ENST00000469207 PLD5Q8N7P1 536 aa12.08□□□□□ -0.48
HDAC3-204ENST00000469207 SPATA22Q8NHS9 363 aa12.08□□□□□ -0.48
HDAC3-204ENST00000469207 FATE1Q969F0 183 aa12.08□□□□□ -0.48
HDAC3-204ENST00000469207 HDAC11Q96DB2 347 aa12.08□□□□□ -0.48
HDAC3-204ENST00000469207 RUFY1Q96T51 708 aa12.08□□□□□ -0.48
HDAC3-204ENST00000469207 ULBP3Q9BZM4 244 aa12.08□□□□□ -0.48
HDAC3-204ENST00000469207 UBP1Q9NZI7 540 aa12.08□□□□□ -0.48
HDAC3-204ENST00000469207 AMACRQ9UHK6 382 aa12.08□□□□□ -0.48
HDAC3-204ENST00000469207 DNPEPQ9ULA0 475 aa12.08□□□□□ -0.48
HDAC3-204ENST00000469207 NENFQ9UMX5 172 aa12.08□□□□□ -0.48
HDAC3-204ENST00000469207 RPL26L1Q9UNX3 145 aaKnown RBP12.08□□□□□ -0.48
HDAC3-204ENST00000469207 WDR37Q9Y2I8 494 aa12.08□□□□□ -0.48
HDAC3-204ENST00000469207 SPO11Q9Y5K1 396 aa12.08□□□□□ -0.48
HDAC3-204ENST00000469207 KCNMB2Q9Y691 235 aa12.08□□□□□ -0.48
HDAC3-204ENST00000469207 BZW2Q9Y6E2 419 aaKnown RBP12.08□□□□□ -0.48
HDAC3-204ENST00000469207 MN1Q10571 1320 aaPredicted RBP12.08□□□□□ -0.48
HDAC3-204ENST00000469207 NBASA2RRP1 2371 aa12.07□□□□□ -0.48
HDAC3-204ENST00000469207 A0A1W2PQJ5 194 aa12.07□□□□□ -0.48
HDAC3-204ENST00000469207 RGSL1A5PLK6 1076 aa12.07□□□□□ -0.48
HDAC3-204ENST00000469207 LILRA5A6NI73 299 aa12.07□□□□□ -0.48
HDAC3-204ENST00000469207 PDZK1P1A8MUH7 402 aa12.07□□□□□ -0.48
HDAC3-204ENST00000469207 CHUKO15111 745 aa12.07□□□□□ -0.48
HDAC3-204ENST00000469207 RASSF9O75901 435 aa12.07□□□□□ -0.48
HDAC3-204ENST00000469207 TIAF1O95411 115 aa12.07□□□□□ -0.48
HDAC3-204ENST00000469207 MT-CYBP00156 380 aaPredicted RBP12.07□□□□□ -0.48
HDAC3-204ENST00000469207 ZNF7P17097 686 aaPredicted RBP12.07□□□□□ -0.48
HDAC3-204ENST00000469207 BPIP17213 487 aa12.07□□□□□ -0.48
HDAC3-204ENST00000469207 CA4P22748 312 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms