RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 MAP9Q49MG5 647 aa11.4□□□□□ -0.58
CDHR3-205ENST00000468143 PHF19Q5T6S3 580 aa11.4□□□□□ -0.58
CDHR3-205ENST00000468143 SEL1L2Q5TEA6 688 aa11.4□□□□□ -0.58
CDHR3-205ENST00000468143 MEI1Q5TIA1 1274 aa11.4□□□□□ -0.58
CDHR3-205ENST00000468143 PDPK2PQ6A1A2 396 aa11.4□□□□□ -0.58
CDHR3-205ENST00000468143 DENND5AQ6IQ26 1287 aa11.4□□□□□ -0.58
CDHR3-205ENST00000468143 IYDQ6PHW0 289 aa11.4□□□□□ -0.58
CDHR3-205ENST00000468143 MICALCLQ6ZW33 695 aa11.4□□□□□ -0.58
CDHR3-205ENST00000468143 PRUNE1Q86TP1 453 aa11.4□□□□□ -0.58
CDHR3-205ENST00000468143 LSMEM2Q8N112 164 aa11.4□□□□□ -0.58
CDHR3-205ENST00000468143 FBXO39Q8N4B4 442 aa11.4□□□□□ -0.58
CDHR3-205ENST00000468143 CCDC112Q8NEF3 446 aa11.4□□□□□ -0.58
CDHR3-205ENST00000468143 WDR36Q8NI36 951 aaKnown RBP11.4□□□□□ -0.58
CDHR3-205ENST00000468143 SLC37A2Q8TED4 501 aa11.4□□□□□ -0.58
CDHR3-205ENST00000468143 NAT14Q8WUY8 206 aa11.4□□□□□ -0.58
CDHR3-205ENST00000468143 C1orf54Q8WWF1 131 aa11.4□□□□□ -0.58
CDHR3-205ENST00000468143 GRAMD1AQ96CP6 724 aa11.4□□□□□ -0.58
CDHR3-205ENST00000468143 SLC46A1Q96NT5 459 aa11.4□□□□□ -0.58
CDHR3-205ENST00000468143 TBL1YQ9BQ87 522 aa11.4□□□□□ -0.58
CDHR3-205ENST00000468143 NUDT22Q9BRQ3 303 aa11.4□□□□□ -0.58
CDHR3-205ENST00000468143 OSGEPL1Q9H4B0 414 aa11.4□□□□□ -0.58
CDHR3-205ENST00000468143 PIH1D1Q9NWS0 290 aaKnown RBP11.4□□□□□ -0.58
CDHR3-205ENST00000468143 FRYQ5TBA9 3013 aa11.4□□□□□ -0.58
CDHR3-205ENST00000468143 A0A087WV48 116 aa11.39□□□□□ -0.59
CDHR3-205ENST00000468143 C2orf81A6NN90 581 aa11.39□□□□□ -0.59
CDHR3-205ENST00000468143 CCL22O00626 93 aa11.39□□□□□ -0.59
CDHR3-205ENST00000468143 GAPDHSO14556 408 aaPredicted RBP11.39□□□□□ -0.59
CDHR3-205ENST00000468143 CHUKO15111 745 aa11.39□□□□□ -0.59
CDHR3-205ENST00000468143 RRP8O43159 456 aaKnown RBP11.39□□□□□ -0.59
CDHR3-205ENST00000468143 VEGFDO43915 354 aa11.39□□□□□ -0.59
CDHR3-205ENST00000468143 HOXB3P14651 431 aaPredicted RBP11.39□□□□□ -0.59
CDHR3-205ENST00000468143 ZNF7P17097 686 aaPredicted RBP11.39□□□□□ -0.59
CDHR3-205ENST00000468143 LPOP22079 712 aaPredicted RBP11.39□□□□□ -0.59
CDHR3-205ENST00000468143 ZFP36L1Q07352 338 aaKnown RBP11.39□□□□□ -0.59
CDHR3-205ENST00000468143 MSLNQ13421 630 aaPredicted RBP11.39□□□□□ -0.59
CDHR3-205ENST00000468143 TAF1AQ15573 450 aaPredicted RBP11.39□□□□□ -0.59
CDHR3-205ENST00000468143 SEPT7Q16181 437 aaKnown RBP11.39□□□□□ -0.59
CDHR3-205ENST00000468143 ZDHHC20Q5W0Z9 365 aa11.39□□□□□ -0.59
CDHR3-205ENST00000468143 ZNF574Q6ZN55 896 aaPredicted RBP11.39□□□□□ -0.59
CDHR3-205ENST00000468143 LRRC69Q6ZNQ3 347 aa11.39□□□□□ -0.59
CDHR3-205ENST00000468143 RAB11FIP2Q7L804 512 aa11.39□□□□□ -0.59
CDHR3-205ENST00000468143 ZNF438Q7Z4V0 828 aa11.39□□□□□ -0.59
CDHR3-205ENST00000468143 PIM3Q86V86 326 aa11.39□□□□□ -0.59
CDHR3-205ENST00000468143 LRRTM4Q86VH4 590 aa11.39□□□□□ -0.59
CDHR3-205ENST00000468143 SLC13A5Q86YT5 568 aaPredicted RBP11.39□□□□□ -0.59
CDHR3-205ENST00000468143 ZNF547Q8IVP9 402 aa11.39□□□□□ -0.59
CDHR3-205ENST00000468143 SFRP1Q8N474 314 aa11.39□□□□□ -0.59
CDHR3-205ENST00000468143 RASGEF1AQ8N9B8 481 aa11.39□□□□□ -0.59
CDHR3-205ENST00000468143 OR4K2Q8NGD2 314 aa11.39□□□□□ -0.59
CDHR3-205ENST00000468143 OR13C4Q8NGS5 318 aa11.39□□□□□ -0.59
CDHR3-205ENST00000468143 ZNF398Q8TD17 642 aa11.39□□□□□ -0.59
CDHR3-205ENST00000468143 ZNF578Q96N58 590 aaPredicted RBP11.39□□□□□ -0.59
CDHR3-205ENST00000468143 TTC25Q96NG3 672 aa11.39□□□□□ -0.59
CDHR3-205ENST00000468143 TMEM74Q96NL1 305 aa11.39□□□□□ -0.59
CDHR3-205ENST00000468143 VPS35Q96QK1 796 aa11.39□□□□□ -0.59
CDHR3-205ENST00000468143 SLC38A3Q99624 504 aa11.39□□□□□ -0.59
CDHR3-205ENST00000468143 STRADBQ9C0K7 418 aa11.39□□□□□ -0.59
CDHR3-205ENST00000468143 FAM96AQ9H5X1 160 aa11.39□□□□□ -0.59
CDHR3-205ENST00000468143 ASCL3Q9NQ33 180 aa11.39□□□□□ -0.59
CDHR3-205ENST00000468143 KCNK4Q9NYG8 393 aa11.39□□□□□ -0.59
CDHR3-205ENST00000468143 SCHIP1Q9P0W5 487 aaPredicted RBP11.39□□□□□ -0.59
CDHR3-205ENST00000468143 FKBPLQ9UIM3 349 aa11.39□□□□□ -0.59
CDHR3-205ENST00000468143 MYLKQ15746 1914 aa11.39□□□□□ -0.59
CDHR3-205ENST00000468143 IGF2RP11717 2491 aa11.38□□□□□ -0.59
CDHR3-205ENST00000468143 GOLGA4Q13439 2230 aaKnown RBP11.38□□□□□ -0.59
CDHR3-205ENST00000468143 USP24Q9UPU5 2620 aa11.38□□□□□ -0.59
CDHR3-205ENST00000468143 IGHV1OR21-1A0A087WYE8 117 aa11.38□□□□□ -0.59
CDHR3-205ENST00000468143 A6NCN8 305 aa11.38□□□□□ -0.59
CDHR3-205ENST00000468143 PLD2O14939 933 aa11.38□□□□□ -0.59
CDHR3-205ENST00000468143 KMOO15229 486 aa11.38□□□□□ -0.59
CDHR3-205ENST00000468143 LIASO43766 372 aa11.38□□□□□ -0.59
CDHR3-205ENST00000468143 DXOO77932 396 aaKnown RBP11.38□□□□□ -0.59
CDHR3-205ENST00000468143 CRTAMO95727 393 aa11.38□□□□□ -0.59
CDHR3-205ENST00000468143 CPNE6O95741 557 aa11.38□□□□□ -0.59
CDHR3-205ENST00000468143 ETS1P14921 441 aa11.38□□□□□ -0.59
CDHR3-205ENST00000468143 ITIH1P19827 911 aa11.38□□□□□ -0.59
CDHR3-205ENST00000468143 RPL10P27635 214 aaKnown RBP11.38□□□□□ -0.59
CDHR3-205ENST00000468143 CCKBRP32239 447 aa11.38□□□□□ -0.59
CDHR3-205ENST00000468143 MAPK9P45984 424 aa11.38□□□□□ -0.59
CDHR3-205ENST00000468143 GPR3P46089 330 aa11.38□□□□□ -0.59
CDHR3-205ENST00000468143 DRG2P55039 364 aaKnown RBP11.38□□□□□ -0.59
CDHR3-205ENST00000468143 HHEXQ03014 270 aa11.38□□□□□ -0.59
CDHR3-205ENST00000468143 CFHR1Q03591 330 aa11.38□□□□□ -0.59
CDHR3-205ENST00000468143 GTF2H3Q13889 308 aa11.38□□□□□ -0.59
CDHR3-205ENST00000468143 NR1D2Q14995 579 aa11.38□□□□□ -0.59
CDHR3-205ENST00000468143 KCTD19Q17RG1 926 aaPredicted RBP11.38□□□□□ -0.59
CDHR3-205ENST00000468143 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.38□□□□□ -0.59
CDHR3-205ENST00000468143 GPRC6AQ5T6X5 926 aa11.38□□□□□ -0.59
CDHR3-205ENST00000468143 KCTD11Q693B1 232 aa11.38□□□□□ -0.59
CDHR3-205ENST00000468143 DET1Q7L5Y6 550 aa11.38□□□□□ -0.59
CDHR3-205ENST00000468143 JAMLQ86YT9 394 aa11.38□□□□□ -0.59
CDHR3-205ENST00000468143 TRAPPC5Q8IUR0 188 aa11.38□□□□□ -0.59
CDHR3-205ENST00000468143 SLITRK4Q8IW52 837 aa11.38□□□□□ -0.59
CDHR3-205ENST00000468143 RCBTB1Q8NDN9 531 aa11.38□□□□□ -0.59
CDHR3-205ENST00000468143 SNIP1Q8TAD8 396 aaKnown RBP11.38□□□□□ -0.59
CDHR3-205ENST00000468143 BRSK1Q8TDC3 778 aa11.38□□□□□ -0.59
CDHR3-205ENST00000468143 LIN37Q96GY3 246 aaPredicted RBP11.38□□□□□ -0.59
CDHR3-205ENST00000468143 ALS2CR12Q96Q35 445 aa11.38□□□□□ -0.59
CDHR3-205ENST00000468143 ZMYND15Q9H091 742 aa11.38□□□□□ -0.59
CDHR3-205ENST00000468143 ASB8Q9H765 288 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms