RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 CEACAM5P06731 702 aa15.03■□□□□ -0
NPHP4-205ENST00000466897 IVLP07476 585 aa15.03■□□□□ -0
NPHP4-205ENST00000466897 ABHD2P08910 425 aa15.03■□□□□ -0
NPHP4-205ENST00000466897 RALBP11234 206 aa15.03■□□□□ -0
NPHP4-205ENST00000466897 HOXD11P31277 338 aaPredicted RBP15.03■□□□□ -0
NPHP4-205ENST00000466897 CA5AP35218 305 aa15.03■□□□□ -0
NPHP4-205ENST00000466897 PHBP35232 272 aa15.03■□□□□ -0
NPHP4-205ENST00000466897 CTSKP43235 329 aa15.03■□□□□ -0
NPHP4-205ENST00000466897 CSNK1EP49674 416 aaKnown RBP15.03■□□□□ -0
NPHP4-205ENST00000466897 CDKN1CP49918 316 aaPredicted RBP15.03■□□□□ -0
NPHP4-205ENST00000466897 ADARP55265 1226 aaKnown RBP15.03■□□□□ -0
NPHP4-205ENST00000466897 C21orf59P57076 290 aa15.03■□□□□ -0
NPHP4-205ENST00000466897 MGAT5Q09328 741 aa15.03■□□□□ -0
NPHP4-205ENST00000466897 ILF2Q12905 390 aaKnown RBP15.03■□□□□ -0
NPHP4-205ENST00000466897 DBN1Q16643 649 aa15.03■□□□□ -0
NPHP4-205ENST00000466897 KDM7AQ6ZMT4 941 aa15.03■□□□□ -0
NPHP4-205ENST00000466897 ADGRG6Q86SQ4 1221 aa15.03■□□□□ -0
NPHP4-205ENST00000466897 SDCCAG8Q86SQ7 713 aaPredicted RBP15.03■□□□□ -0
NPHP4-205ENST00000466897 GSPT2Q8IYD1 628 aaKnown RBP15.03■□□□□ -0
NPHP4-205ENST00000466897 MYRIPQ8NFW9 859 aa15.03■□□□□ -0
NPHP4-205ENST00000466897 OR56A4Q8NGH8 313 aa15.03■□□□□ -0
NPHP4-205ENST00000466897 AENQ8WTP8 325 aaKnown RBP15.03■□□□□ -0
NPHP4-205ENST00000466897 CAVIN3Q969G5 261 aa15.03■□□□□ -0
NPHP4-205ENST00000466897 ZNF514Q96K75 400 aaPredicted RBP15.03■□□□□ -0
NPHP4-205ENST00000466897 ARRDC1-AS1Q9H2J1 176 aa15.03■□□□□ -0
NPHP4-205ENST00000466897 NSMCE4AQ9NXX6 385 aa15.03■□□□□ -0
NPHP4-205ENST00000466897 MARCH4Q9P2E8 410 aaPredicted RBP15.03■□□□□ -0
NPHP4-205ENST00000466897 SLC6A14Q9UN76 642 aa15.03■□□□□ -0
NPHP4-205ENST00000466897 ANKRD6Q9Y2G4 727 aa15.03■□□□□ -0
NPHP4-205ENST00000466897 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.03■□□□□ -0
NPHP4-205ENST00000466897 OAS3Q9Y6K5 1087 aaKnown RBP15.03■□□□□ -0
NPHP4-205ENST00000466897 DGKBQ9Y6T7 804 aa15.03■□□□□ -0
NPHP4-205ENST00000466897 TMEM202A6NGA9 273 aa15.02■□□□□ -0
NPHP4-205ENST00000466897 FAM159BA6NKW6 160 aa15.02■□□□□ -0
NPHP4-205ENST00000466897 QSOX1O00391 747 aa15.02■□□□□ -0
NPHP4-205ENST00000466897 CHUKO15111 745 aa15.02■□□□□ -0
NPHP4-205ENST00000466897 DFNA5O60443 496 aa15.02■□□□□ -0
NPHP4-205ENST00000466897 AP2A2O94973 939 aa15.02■□□□□ -0
NPHP4-205ENST00000466897 C1QAP02745 245 aa15.02■□□□□ -0
NPHP4-205ENST00000466897 ERVK-10P10266 1014 aa15.02■□□□□ -0
NPHP4-205ENST00000466897 NSG1P42857 185 aa15.02■□□□□ -0
NPHP4-205ENST00000466897 PMS2P54278 862 aa15.02■□□□□ -0
NPHP4-205ENST00000466897 TMEM115Q12893 351 aaPredicted RBP15.02■□□□□ -0
NPHP4-205ENST00000466897 NAB1Q13506 487 aa15.02■□□□□ -0
NPHP4-205ENST00000466897 FZD2Q14332 565 aa15.02■□□□□ -0
NPHP4-205ENST00000466897 SEMA3AQ14563 771 aa15.02■□□□□ -0
NPHP4-205ENST00000466897 KYNUQ16719 465 aa15.02■□□□□ -0
NPHP4-205ENST00000466897 MAP9Q49MG5 647 aa15.02■□□□□ -0
NPHP4-205ENST00000466897 KHDC1Q4VXA5 237 aaKnown RBP15.02■□□□□ -0
NPHP4-205ENST00000466897 HSP90AA5PQ58FG0 334 aa15.02■□□□□ -0
NPHP4-205ENST00000466897 TRIM61Q5EBN2 209 aa15.02■□□□□ -0
NPHP4-205ENST00000466897 TPRG1LQ5T0D9 272 aa15.02■□□□□ -0
NPHP4-205ENST00000466897 ZNF470Q6ECI4 717 aa15.02■□□□□ -0
NPHP4-205ENST00000466897 TRMT10BQ6PF06 316 aaKnown RBP15.02■□□□□ -0
NPHP4-205ENST00000466897 IL27RAQ6UWB1 636 aa15.02■□□□□ -0
NPHP4-205ENST00000466897 TAS2R42Q7RTR8 314 aa15.02■□□□□ -0
NPHP4-205ENST00000466897 SLC26A11Q86WA9 606 aa15.02■□□□□ -0
NPHP4-205ENST00000466897 LRRC6Q86X45 466 aa15.02■□□□□ -0
NPHP4-205ENST00000466897 SPATS2Q86XZ4 545 aaKnown RBP15.02■□□□□ -0
NPHP4-205ENST00000466897 UNC5BQ8IZJ1 945 aa15.02■□□□□ -0
NPHP4-205ENST00000466897 RBFAQ8N0V3 343 aa15.02■□□□□ -0
NPHP4-205ENST00000466897 C2CD4AQ8NCU7 369 aaPredicted RBP15.02■□□□□ -0
NPHP4-205ENST00000466897 CDKL2Q92772 493 aa15.02■□□□□ -0
NPHP4-205ENST00000466897 FAM96AQ9H5X1 160 aa15.02■□□□□ -0
NPHP4-205ENST00000466897 FAM86C1Q9NVL1 165 aa15.02■□□□□ -0
NPHP4-205ENST00000466897 ATXN10Q9UBB4 475 aa15.02■□□□□ -0
NPHP4-205ENST00000466897 GPR34Q9UPC5 381 aa15.02■□□□□ -0
NPHP4-205ENST00000466897 TDRD6O60522 2096 aaKnown RBP15.02□□□□□ -0.01
NPHP4-205ENST00000466897 A0A1B0GVT2 93 aa15.01□□□□□ -0.01
NPHP4-205ENST00000466897 PRSS38A1L453 326 aa15.01□□□□□ -0.01
NPHP4-205ENST00000466897 KLHL33A6NCF5 533 aa15.01□□□□□ -0.01
NPHP4-205ENST00000466897 GOLGA8KD6RF30 607 aa15.01□□□□□ -0.01
NPHP4-205ENST00000466897 F8W8V4 182 aa15.01□□□□□ -0.01
NPHP4-205ENST00000466897 GOLGA8TH3BQL2 631 aa15.01□□□□□ -0.01
NPHP4-205ENST00000466897 NUAK1O60285 661 aa15.01□□□□□ -0.01
NPHP4-205ENST00000466897 DNAJC6O75061 913 aa15.01□□□□□ -0.01
NPHP4-205ENST00000466897 SYPP08247 313 aa15.01□□□□□ -0.01
NPHP4-205ENST00000466897 ZNF806P0C7X5 589 aa15.01□□□□□ -0.01
NPHP4-205ENST00000466897 PRSS56P0CW18 603 aa15.01□□□□□ -0.01
NPHP4-205ENST00000466897 NME1P15531 152 aaKnown RBP15.01□□□□□ -0.01
NPHP4-205ENST00000466897 ZNF7P17097 686 aaPredicted RBP15.01□□□□□ -0.01
NPHP4-205ENST00000466897 MSH3P20585 1137 aa15.01□□□□□ -0.01
NPHP4-205ENST00000466897 RPS3P23396 243 aaKnown RBP eCLIP15.01□□□□□ -0.01
NPHP4-205ENST00000466897 PMLP29590 882 aa15.01□□□□□ -0.01
NPHP4-205ENST00000466897 AKT1P31749 480 aa15.01□□□□□ -0.01
NPHP4-205ENST00000466897 SLC1A2P43004 574 aa15.01□□□□□ -0.01
NPHP4-205ENST00000466897 BLKP51451 505 aa15.01□□□□□ -0.01
NPHP4-205ENST00000466897 B4GALNT1Q00973 533 aa15.01□□□□□ -0.01
NPHP4-205ENST00000466897 BNC1Q01954 994 aa15.01□□□□□ -0.01
NPHP4-205ENST00000466897 GRIK2Q13002 908 aa15.01□□□□□ -0.01
NPHP4-205ENST00000466897 EIF2B5Q13144 721 aaKnown RBP15.01□□□□□ -0.01
NPHP4-205ENST00000466897 GTF2H3Q13889 308 aa15.01□□□□□ -0.01
NPHP4-205ENST00000466897 NAA30Q147X3 362 aaPredicted RBP15.01□□□□□ -0.01
NPHP4-205ENST00000466897 ZNF423Q2M1K9 1284 aa15.01□□□□□ -0.01
NPHP4-205ENST00000466897 BCL7AQ4VC05 210 aa15.01□□□□□ -0.01
NPHP4-205ENST00000466897 TEDDM1Q5T9Z0 273 aa15.01□□□□□ -0.01
NPHP4-205ENST00000466897 ENPP7Q6UWV6 458 aa15.01□□□□□ -0.01
NPHP4-205ENST00000466897 LAYNQ6UX15 382 aa15.01□□□□□ -0.01
NPHP4-205ENST00000466897 TRIM74Q86UV6 250 aa15.01□□□□□ -0.01
NPHP4-205ENST00000466897 GDAP1Q8TB36 358 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms