RNA–Protein interactions for RNA: ENST00000466606.1

EDEM3-205, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, human

TSL 3

Gene EDEM3, Length 487 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EDEM3-205	ENST00000466606	CEPT1	Q9Y6K0	416 aa		4.18	□□□□□ -1.74
EDEM3-205	ENST00000466606	RANBP2	P49792	3224 aa	Known RBP	4.18	□□□□□ -1.74
EDEM3-205	ENST00000466606	CRB1	P82279	1406 aa		4.18	□□□□□ -1.74
EDEM3-205	ENST00000466606	WNK3	Q9BYP7	1800 aa		4.18	□□□□□ -1.74
EDEM3-205	ENST00000466606	CPD	O75976	1380 aa		4.17	□□□□□ -1.74
EDEM3-205	ENST00000466606	TUBGCP6	Q96RT7	1819 aa		4.17	□□□□□ -1.74
EDEM3-205	ENST00000466606	IGLV5-37	A0A075B6J1	123 aa		4.17	□□□□□ -1.74
EDEM3-205	ENST00000466606	CPED1	A4D0V7	1026 aa		4.17	□□□□□ -1.74
EDEM3-205	ENST00000466606	EIF3CL	B5ME19	914 aa	Known RBP	4.17	□□□□□ -1.74
EDEM3-205	ENST00000466606	TAF4	O00268	1085 aa		4.17	□□□□□ -1.74
EDEM3-205	ENST00000466606	WNT9B	O14905	357 aa		4.17	□□□□□ -1.74
EDEM3-205	ENST00000466606	PLRG1	O43660	514 aa	Known RBP	4.17	□□□□□ -1.74
EDEM3-205	ENST00000466606	MBD4	O95243	580 aa		4.17	□□□□□ -1.74
EDEM3-205	ENST00000466606	CLDN14	O95500	239 aa		4.17	□□□□□ -1.74
EDEM3-205	ENST00000466606	IGHV4-30-4	P0DP06	118 aa		4.17	□□□□□ -1.74
EDEM3-205	ENST00000466606	TGFB3	P10600	412 aa		4.17	□□□□□ -1.74
EDEM3-205	ENST00000466606	FGF3	P11487	239 aa	Predicted RBP	4.17	□□□□□ -1.74
EDEM3-205	ENST00000466606	KRT10	P13645	584 aa		4.17	□□□□□ -1.74
EDEM3-205	ENST00000466606	CD58	P19256	250 aa		4.17	□□□□□ -1.74
EDEM3-205	ENST00000466606	GPT	P24298	496 aa		4.17	□□□□□ -1.74
EDEM3-205	ENST00000466606	ARL1	P40616	181 aa	Predicted RBP	4.17	□□□□□ -1.74
EDEM3-205	ENST00000466606	TNNT2	P45379	298 aa	Predicted RBP	4.17	□□□□□ -1.74
EDEM3-205	ENST00000466606	BRWD1-AS2	P59051	145 aa		4.17	□□□□□ -1.74
EDEM3-205	ENST00000466606	POU5F1B	Q06416	359 aa		4.17	□□□□□ -1.74
EDEM3-205	ENST00000466606	DRAP1	Q14919	205 aa	Predicted RBP	4.17	□□□□□ -1.74
EDEM3-205	ENST00000466606	AMZ1	Q400G9	498 aa		4.17	□□□□□ -1.74
EDEM3-205	ENST00000466606	BMP2KL	Q5H9B9	411 aa		4.17	□□□□□ -1.74
EDEM3-205	ENST00000466606	C9orf57	Q5W0N0	161 aa		4.17	□□□□□ -1.74
EDEM3-205	ENST00000466606	CASC1	Q6TDU7	716 aa		4.17	□□□□□ -1.74
EDEM3-205	ENST00000466606	SPATA6L	Q8N4H0	392 aa		4.17	□□□□□ -1.74
EDEM3-205	ENST00000466606	INTS12	Q96CB8	462 aa	Known RBP	4.17	□□□□□ -1.74
EDEM3-205	ENST00000466606	ADGRG7	Q96K78	797 aa		4.17	□□□□□ -1.74
EDEM3-205	ENST00000466606	LMLN	Q96KR4	655 aa		4.17	□□□□□ -1.74
EDEM3-205	ENST00000466606	C3orf30	Q96M34	536 aa		4.17	□□□□□ -1.74
EDEM3-205	ENST00000466606	OR1F2P	Q96R84	312 aa		4.17	□□□□□ -1.74
EDEM3-205	ENST00000466606	C1QTNF5	Q9BXJ0	243 aa		4.17	□□□□□ -1.74
EDEM3-205	ENST00000466606	RANBP17	Q9H2T7	1088 aa	Known RBP	4.17	□□□□□ -1.74
EDEM3-205	ENST00000466606	SCPEP1	Q9HB40	452 aa		4.17	□□□□□ -1.74
EDEM3-205	ENST00000466606	HINT3	Q9NQE9	182 aa	Known RBP	4.17	□□□□□ -1.74
EDEM3-205	ENST00000466606	SELENON	Q9NZV5	590 aa		4.17	□□□□□ -1.74
EDEM3-205	ENST00000466606	AASS	Q9UDR5	926 aa		4.17	□□□□□ -1.74
EDEM3-205	ENST00000466606	KCNS2	Q9ULS6	477 aa		4.17	□□□□□ -1.74
EDEM3-205	ENST00000466606	NFS1	Q9Y697	457 aa		4.17	□□□□□ -1.74
EDEM3-205	ENST00000466606	MAP3K19	Q56UN5	1328 aa		4.17	□□□□□ -1.74
EDEM3-205	ENST00000466606	UBR2	Q8IWV8	1755 aa		4.17	□□□□□ -1.74
EDEM3-205	ENST00000466606	LAMA2	P24043	3122 aa	Known RBP	4.17	□□□□□ -1.74
EDEM3-205	ENST00000466606	TNRC6C	Q9HCJ0	1690 aa	Known RBP	4.16	□□□□□ -1.74
EDEM3-205	ENST00000466606	TTC36	A6NLP5	189 aa		4.16	□□□□□ -1.74
EDEM3-205	ENST00000466606	KRTAP29-1	A8MX34	341 aa	Predicted RBP	4.16	□□□□□ -1.74
EDEM3-205	ENST00000466606		B4E171	279 aa		4.16	□□□□□ -1.74
EDEM3-205	ENST00000466606	VCY	O14598	125 aa		4.16	□□□□□ -1.74
EDEM3-205	ENST00000466606	NKX2-2	O95096	273 aa		4.16	□□□□□ -1.74
EDEM3-205	ENST00000466606	TSPAN7	P41732	249 aa		4.16	□□□□□ -1.74
EDEM3-205	ENST00000466606	PEX5	P50542	639 aa		4.16	□□□□□ -1.74
EDEM3-205	ENST00000466606	METAP2	P50579	478 aa	Known RBP eCLIP	4.16	□□□□□ -1.74
EDEM3-205	ENST00000466606	RPS3A	P61247	264 aa	Known RBP	4.16	□□□□□ -1.74
EDEM3-205	ENST00000466606	OLR1	P78380	273 aa		4.16	□□□□□ -1.74
EDEM3-205	ENST00000466606	EEF1A2	Q05639	463 aa	Known RBP	4.16	□□□□□ -1.74
EDEM3-205	ENST00000466606	DLG1	Q12959	904 aa		4.16	□□□□□ -1.74
EDEM3-205	ENST00000466606	COASY	Q13057	564 aa		4.16	□□□□□ -1.74
EDEM3-205	ENST00000466606	EIF4A2	Q14240	407 aa	Known RBP	4.16	□□□□□ -1.74
EDEM3-205	ENST00000466606	TWISTNB	Q3B726	338 aa	Predicted RBP	4.16	□□□□□ -1.74
EDEM3-205	ENST00000466606	CAPRIN2	Q6IMN6	1127 aa	Known RBP	4.16	□□□□□ -1.74
EDEM3-205	ENST00000466606	NEK10	Q6ZWH5	1172 aa		4.16	□□□□□ -1.74
EDEM3-205	ENST00000466606	TAOK1	Q7L7X3	1001 aa		4.16	□□□□□ -1.74
EDEM3-205	ENST00000466606	ITPRIP	Q8IWB1	547 aa		4.16	□□□□□ -1.74
EDEM3-205	ENST00000466606	ADHFE1	Q8IWW8	467 aa		4.16	□□□□□ -1.74
EDEM3-205	ENST00000466606	RPAP2	Q8IXW5	612 aa	Predicted RBP	4.16	□□□□□ -1.74
EDEM3-205	ENST00000466606	TDRD7	Q8NHU6	1098 aa	Known RBP	4.16	□□□□□ -1.74
EDEM3-205	ENST00000466606	FRAT1	Q92837	279 aa	Predicted RBP	4.16	□□□□□ -1.74
EDEM3-205	ENST00000466606	MPP4	Q96JB8	637 aa		4.16	□□□□□ -1.74
EDEM3-205	ENST00000466606	SLC41A2	Q96JW4	573 aa		4.16	□□□□□ -1.74
EDEM3-205	ENST00000466606	CAPNS2	Q96L46	248 aa		4.16	□□□□□ -1.74
EDEM3-205	ENST00000466606	WDFY2	Q96P53	400 aa		4.16	□□□□□ -1.74
EDEM3-205	ENST00000466606	SLITRK1	Q96PX8	696 aa		4.16	□□□□□ -1.74
EDEM3-205	ENST00000466606	CTAGE1	Q96RT6	745 aa		4.16	□□□□□ -1.74
EDEM3-205	ENST00000466606	FAM110A	Q9BQ89	295 aa		4.16	□□□□□ -1.74
EDEM3-205	ENST00000466606	MMTAG2	Q9BU76	263 aa	Known RBP	4.16	□□□□□ -1.74
EDEM3-205	ENST00000466606	C1QTNF4	Q9BXJ3	329 aa		4.16	□□□□□ -1.74
EDEM3-205	ENST00000466606	GAREM1	Q9H706	876 aa		4.16	□□□□□ -1.74
EDEM3-205	ENST00000466606	PPP1R3E	Q9H7J1	279 aa		4.16	□□□□□ -1.74
EDEM3-205	ENST00000466606	POLR1B	Q9H9Y6	1135 aa		4.16	□□□□□ -1.74
EDEM3-205	ENST00000466606	SLC28A3	Q9HAS3	691 aa		4.16	□□□□□ -1.74
EDEM3-205	ENST00000466606	ASAH2	Q9NR71	780 aa		4.16	□□□□□ -1.74
EDEM3-205	ENST00000466606	ORC3	Q9UBD5	711 aa	Predicted RBP	4.16	□□□□□ -1.74
EDEM3-205	ENST00000466606	CNOT8	Q9UFF9	292 aa	Known RBP	4.16	□□□□□ -1.74
EDEM3-205	ENST00000466606	ERVK-11	Q9UQG0	969 aa		4.16	□□□□□ -1.74
EDEM3-205	ENST00000466606	PIAS3	Q9Y6X2	628 aa		4.16	□□□□□ -1.74
EDEM3-205	ENST00000466606	UTY	O14607	1347 aa		4.16	□□□□□ -1.74
EDEM3-205	ENST00000466606	ATXN2	Q99700	1313 aa	Known RBP	4.16	□□□□□ -1.74
EDEM3-205	ENST00000466606	ANKRD11	Q6UB99	2663 aa	Predicted RBP	4.16	□□□□□ -1.74
EDEM3-205	ENST00000466606	ATRX	P46100	2492 aa		4.15	□□□□□ -1.74
EDEM3-205	ENST00000466606	BRCA2	P51587	3418 aa		4.15	□□□□□ -1.74
EDEM3-205	ENST00000466606	FAM237A	A0A1B0GTK4	181 aa		4.15	□□□□□ -1.75
EDEM3-205	ENST00000466606	PLSCR5	A0PG75	271 aa		4.15	□□□□□ -1.75
EDEM3-205	ENST00000466606	BTBD18	B2RXH4	712 aa		4.15	□□□□□ -1.75
EDEM3-205	ENST00000466606	ACOT8	O14734	319 aa		4.15	□□□□□ -1.75
EDEM3-205	ENST00000466606	SEC14L2	O76054	403 aa		4.15	□□□□□ -1.75
EDEM3-205	ENST00000466606	FTCD	O95954	541 aa		4.15	□□□□□ -1.75
EDEM3-205	ENST00000466606	HSP90AB1	P08238	724 aa	Known RBP	4.15	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms