RNA–Protein interactions for RNA: ENST00000466048.6

USP54-210, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 4,674 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-210ENST00000466048 SLC1A5Q15758 541 aa7.62□□□□□ -1.19
USP54-210ENST00000466048 KIAA0408Q6ZU52 694 aa7.62□□□□□ -1.19
USP54-210ENST00000466048 STRA8Q7Z7C7 330 aa7.62□□□□□ -1.19
USP54-210ENST00000466048 KLHDC8BQ8IXV7 354 aa7.62□□□□□ -1.19
USP54-210ENST00000466048 DEFB107AQ8IZN7 70 aa7.62□□□□□ -1.19
USP54-210ENST00000466048 SIX5Q8N196 739 aa7.62□□□□□ -1.19
USP54-210ENST00000466048 C19orf18Q8NEA5 215 aa7.62□□□□□ -1.19
USP54-210ENST00000466048 ZSCAN18Q8TBC5 510 aaPredicted RBP7.62□□□□□ -1.19
USP54-210ENST00000466048 NAT14Q8WUY8 206 aa7.62□□□□□ -1.19
USP54-210ENST00000466048 PSMG2Q969U7 264 aa7.62□□□□□ -1.19
USP54-210ENST00000466048 TRMT2BQ96GJ1 504 aaKnown RBP7.62□□□□□ -1.19
USP54-210ENST00000466048 KLHL3Q9UH77 587 aa7.62□□□□□ -1.19
USP54-210ENST00000466048 FBXO10Q9UK96 956 aa7.62□□□□□ -1.19
USP54-210ENST00000466048 RAD51BO15315 384 aa7.62□□□□□ -1.19
USP54-210ENST00000466048 SOAT2O75908 522 aa7.62□□□□□ -1.19
USP54-210ENST00000466048 OAS1P00973 400 aaKnown RBP7.62□□□□□ -1.19
USP54-210ENST00000466048 CNPP09543 421 aaKnown RBP7.62□□□□□ -1.19
USP54-210ENST00000466048 CRABP2P29373 138 aa7.62□□□□□ -1.19
USP54-210ENST00000466048 SUOXP51687 545 aa7.62□□□□□ -1.19
USP54-210ENST00000466048 LIMK2P53671 638 aa7.62□□□□□ -1.19
USP54-210ENST00000466048 ITGA1P56199 1179 aa7.62□□□□□ -1.19
USP54-210ENST00000466048 RPL26P61254 145 aaKnown RBP7.62□□□□□ -1.19
USP54-210ENST00000466048 MTM1Q13496 603 aa7.62□□□□□ -1.19
USP54-210ENST00000466048 IMPG1Q17R60 797 aa7.62□□□□□ -1.19
USP54-210ENST00000466048 ARHGAP12Q8IWW6 846 aa7.62□□□□□ -1.19
USP54-210ENST00000466048 MPP5Q8N3R9 675 aa7.62□□□□□ -1.19
USP54-210ENST00000466048 PCDH20Q8N6Y1 951 aaKnown RBP7.62□□□□□ -1.19
USP54-210ENST00000466048 AMER2Q8N7J2 671 aa7.62□□□□□ -1.19
USP54-210ENST00000466048 SERAC1Q96JX3 654 aa7.62□□□□□ -1.19
USP54-210ENST00000466048 C7orf26Q96N11 449 aa7.62□□□□□ -1.19
USP54-210ENST00000466048 AASDHPPTQ9NRN7 309 aa7.62□□□□□ -1.19
USP54-210ENST00000466048 DNAAF2Q9NVR5 837 aaKnown RBP7.62□□□□□ -1.19
USP54-210ENST00000466048 THAP1Q9NVV9 213 aa7.62□□□□□ -1.19
USP54-210ENST00000466048 VTI1BQ9UEU0 232 aa7.62□□□□□ -1.19
USP54-210ENST00000466048 H3BNC9 293 aa7.61□□□□□ -1.19
USP54-210ENST00000466048 TRMUO75648 421 aaKnown RBP7.61□□□□□ -1.19
USP54-210ENST00000466048 IGLV3-27P01718 113 aa7.61□□□□□ -1.19
USP54-210ENST00000466048 EPHX1P07099 455 aa7.61□□□□□ -1.19
USP54-210ENST00000466048 DHRS4L1P0CG22 281 aa7.61□□□□□ -1.19
USP54-210ENST00000466048 HK2P52789 917 aa7.61□□□□□ -1.19
USP54-210ENST00000466048 TRAF2Q12933 501 aa7.61□□□□□ -1.19
USP54-210ENST00000466048 BNIP1Q12981 228 aa7.61□□□□□ -1.19
USP54-210ENST00000466048 MPP2Q14168 576 aa7.61□□□□□ -1.19
USP54-210ENST00000466048 RTP2Q5QGT7 225 aa7.61□□□□□ -1.19
USP54-210ENST00000466048 PIK3R6Q5UE93 754 aa7.61□□□□□ -1.19
USP54-210ENST00000466048 FAM9CQ8IZT9 166 aa7.61□□□□□ -1.19
USP54-210ENST00000466048 MYO1HQ8N1T3 1032 aa7.61□□□□□ -1.19
USP54-210ENST00000466048 PEX13Q92968 403 aa7.61□□□□□ -1.19
USP54-210ENST00000466048 KLF6Q99612 283 aaPredicted RBP7.61□□□□□ -1.19
USP54-210ENST00000466048 EBF2Q9HAK2 575 aa7.61□□□□□ -1.19
USP54-210ENST00000466048 VPS51Q9UID3 782 aa7.61□□□□□ -1.19
USP54-210ENST00000466048 TSR3Q9UJK0 312 aaKnown RBP7.61□□□□□ -1.19
USP54-210ENST00000466048 SLC39A10Q9ULF5 831 aa7.61□□□□□ -1.19
USP54-210ENST00000466048 TCAF1Q9Y4C2 921 aa7.61□□□□□ -1.19
USP54-210ENST00000466048 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.61□□□□□ -1.19
USP54-210ENST00000466048 SNTNA6NMZ2 147 aa7.61□□□□□ -1.19
USP54-210ENST00000466048 H7C0S8 307 aa7.61□□□□□ -1.19
USP54-210ENST00000466048 PAPSS2O95340 614 aaPredicted RBP7.61□□□□□ -1.19
USP54-210ENST00000466048 ZNF23P17027 643 aa7.61□□□□□ -1.19
USP54-210ENST00000466048 CHRM3P20309 590 aa7.61□□□□□ -1.19
USP54-210ENST00000466048 GPR15P49685 360 aa7.61□□□□□ -1.19
USP54-210ENST00000466048 CYP4F8P98187 520 aa7.61□□□□□ -1.19
USP54-210ENST00000466048 TNK2Q07912 1038 aa7.61□□□□□ -1.19
USP54-210ENST00000466048 TRAF3Q13114 568 aa7.61□□□□□ -1.19
USP54-210ENST00000466048 FAM83EQ2M2I3 478 aa7.61□□□□□ -1.19
USP54-210ENST00000466048 USP39Q53GS9 565 aaKnown RBP7.61□□□□□ -1.19
USP54-210ENST00000466048 KIAA0930Q6ICG6 404 aaPredicted RBP7.61□□□□□ -1.19
USP54-210ENST00000466048 ZNF852Q6ZMS4 543 aa7.61□□□□□ -1.19
USP54-210ENST00000466048 KBTBD6Q86V97 674 aa7.61□□□□□ -1.19
USP54-210ENST00000466048 SFRP1Q8N474 314 aa7.61□□□□□ -1.19
USP54-210ENST00000466048 NAT16Q8N8M0 369 aa7.61□□□□□ -1.19
USP54-210ENST00000466048 LRRN4Q8WUT4 740 aa7.61□□□□□ -1.19
USP54-210ENST00000466048 TMEM159Q96B96 161 aa7.61□□□□□ -1.19
USP54-210ENST00000466048 LRIG1Q96JA1 1093 aa7.61□□□□□ -1.19
USP54-210ENST00000466048 NLNQ9BYT8 704 aa7.61□□□□□ -1.19
USP54-210ENST00000466048 GKN1Q9NS71 199 aa7.61□□□□□ -1.19
USP54-210ENST00000466048 OBP2AQ9NY56 170 aa7.61□□□□□ -1.19
USP54-210ENST00000466048 PTPRDP23468 1912 aa7.61□□□□□ -1.19
USP54-210ENST00000466048 EDDM13A0A1B0GTR0 161 aa7.61□□□□□ -1.19
USP54-210ENST00000466048 F8W810 466 aa7.61□□□□□ -1.19
USP54-210ENST00000466048 CCNA2P20248 432 aa7.61□□□□□ -1.19
USP54-210ENST00000466048 AKT2P31751 481 aa7.61□□□□□ -1.19
USP54-210ENST00000466048 FOXN2P32314 431 aa7.61□□□□□ -1.19
USP54-210ENST00000466048 CCT3P49368 545 aaKnown RBP7.61□□□□□ -1.19
USP54-210ENST00000466048 USP10Q14694 798 aaKnown RBP7.61□□□□□ -1.19
USP54-210ENST00000466048 TEAD2Q15562 447 aa7.61□□□□□ -1.19
USP54-210ENST00000466048 TJAP1Q5JTD0 557 aa7.61□□□□□ -1.19
USP54-210ENST00000466048 WDR45BQ5MNZ6 344 aa7.61□□□□□ -1.19
USP54-210ENST00000466048 SEL1L3Q68CR1 1132 aa7.61□□□□□ -1.19
USP54-210ENST00000466048 GLT6D1Q7Z4J2 308 aa7.61□□□□□ -1.19
USP54-210ENST00000466048 AKAP14Q86UN6 197 aa7.61□□□□□ -1.19
USP54-210ENST00000466048 DDIASQ8IXT1 998 aa7.61□□□□□ -1.19
USP54-210ENST00000466048 HS6ST3Q8IZP7 471 aa7.61□□□□□ -1.19
USP54-210ENST00000466048 ADCY4Q8NFM4 1077 aa7.61□□□□□ -1.19
USP54-210ENST00000466048 VPS33AQ96AX1 596 aa7.61□□□□□ -1.19
USP54-210ENST00000466048 RHOJQ9H4E5 214 aa7.61□□□□□ -1.19
USP54-210ENST00000466048 FAM32AQ9Y421 112 aaKnown RBP7.61□□□□□ -1.19
USP54-210ENST00000466048 COL4A4P53420 1690 aaPredicted RBP7.61□□□□□ -1.19
USP54-210ENST00000466048 C15orf38-AP3S2A0A0A6YYH1 394 aa7.61□□□□□ -1.19
USP54-210ENST00000466048 LINC01553A4QN01 128 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms