RNA–Protein interactions for RNA: ENST00000465627.5

UBA3-208, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-208ENST00000465627 MT-ND3P03897 115 aa8.75□□□□□ -1.01
UBA3-208ENST00000465627 SLC35E2BP0CK96 405 aa8.75□□□□□ -1.01
UBA3-208ENST00000465627 ADRB3P13945 408 aa8.75□□□□□ -1.01
UBA3-208ENST00000465627 CHN1P15882 459 aa8.75□□□□□ -1.01
UBA3-208ENST00000465627 CD9P21926 228 aa8.75□□□□□ -1.01
UBA3-208ENST00000465627 MC4RP32245 332 aa8.75□□□□□ -1.01
UBA3-208ENST00000465627 CRHR1P34998 444 aa8.75□□□□□ -1.01
UBA3-208ENST00000465627 RPA3P35244 121 aaPredicted RBP8.75□□□□□ -1.01
UBA3-208ENST00000465627 GMPRP36959 345 aa8.75□□□□□ -1.01
UBA3-208ENST00000465627 MDH1P40925 334 aaKnown RBP8.75□□□□□ -1.01
UBA3-208ENST00000465627 P2RY2P41231 377 aa8.75□□□□□ -1.01
UBA3-208ENST00000465627 ATP1A2P50993 1020 aa8.75□□□□□ -1.01
UBA3-208ENST00000465627 MMP16P51512 607 aa8.75□□□□□ -1.01
UBA3-208ENST00000465627 TAS2R39P59534 338 aa8.75□□□□□ -1.01
UBA3-208ENST00000465627 RPS14P62263 151 aaKnown RBP8.75□□□□□ -1.01
UBA3-208ENST00000465627 SATB1Q01826 763 aa8.75□□□□□ -1.01
UBA3-208ENST00000465627 ILF2Q12905 390 aaKnown RBP8.75□□□□□ -1.01
UBA3-208ENST00000465627 FZD5Q13467 585 aa8.75□□□□□ -1.01
UBA3-208ENST00000465627 NFATC2Q13469 925 aa8.75□□□□□ -1.01
UBA3-208ENST00000465627 TMEM52BQ4KMG9 183 aa8.75□□□□□ -1.01
UBA3-208ENST00000465627 SLC44A4Q53GD3 710 aa8.75□□□□□ -1.01
UBA3-208ENST00000465627 HENMT1Q5T8I9 393 aaKnown RBP8.75□□□□□ -1.01
UBA3-208ENST00000465627 AGBL4Q5VU57 503 aa8.75□□□□□ -1.01
UBA3-208ENST00000465627 MRNIPQ6NTE8 343 aa8.75□□□□□ -1.01
UBA3-208ENST00000465627 CMC1Q7Z7K0 106 aa8.75□□□□□ -1.01
UBA3-208ENST00000465627 MMAAQ8IVH4 418 aaKnown RBP8.75□□□□□ -1.01
UBA3-208ENST00000465627 CEP97Q8IW35 865 aa8.75□□□□□ -1.01
UBA3-208ENST00000465627 NDUFAF2Q8N183 169 aa8.75□□□□□ -1.01
UBA3-208ENST00000465627 SIX5Q8N196 739 aa8.75□□□□□ -1.01
UBA3-208ENST00000465627 TMEM151AQ8N4L1 468 aa8.75□□□□□ -1.01
UBA3-208ENST00000465627 ARFGAP2Q8N6H7 521 aa8.75□□□□□ -1.01
UBA3-208ENST00000465627 CCDC97Q96F63 343 aaPredicted RBP8.75□□□□□ -1.01
UBA3-208ENST00000465627 APOPT1Q96IL0 206 aa8.75□□□□□ -1.01
UBA3-208ENST00000465627 COQ10AQ96MF6 247 aa8.75□□□□□ -1.01
UBA3-208ENST00000465627 GPR78Q96P69 363 aa8.75□□□□□ -1.01
UBA3-208ENST00000465627 KLF6Q99612 283 aaPredicted RBP8.75□□□□□ -1.01
UBA3-208ENST00000465627 OLFM1Q99784 485 aa8.75□□□□□ -1.01
UBA3-208ENST00000465627 OMDQ99983 421 aa8.75□□□□□ -1.01
UBA3-208ENST00000465627 MKRN2Q9H000 416 aaKnown RBP8.75□□□□□ -1.01
UBA3-208ENST00000465627 CCDC134Q9H6E4 229 aa8.75□□□□□ -1.01
UBA3-208ENST00000465627 CNOT10Q9H9A5 744 aaKnown RBP8.75□□□□□ -1.01
UBA3-208ENST00000465627 SNX15Q9NRS6 342 aa8.75□□□□□ -1.01
UBA3-208ENST00000465627 SMOXQ9NWM0 555 aa8.75□□□□□ -1.01
UBA3-208ENST00000465627 GRID1Q9ULK0 1009 aa8.75□□□□□ -1.01
UBA3-208ENST00000465627 ITM2BQ9Y287 266 aa8.75□□□□□ -1.01
UBA3-208ENST00000465627 PKP3Q9Y446 797 aa8.75□□□□□ -1.01
UBA3-208ENST00000465627 MTF2Q9Y483 593 aaPredicted RBP8.75□□□□□ -1.01
UBA3-208ENST00000465627 FAM95CA0A1B0GW59 222 aa8.74□□□□□ -1.01
UBA3-208ENST00000465627 A8MX80 341 aa8.74□□□□□ -1.01
UBA3-208ENST00000465627 GOLGA8RI6L899 631 aa8.74□□□□□ -1.01
UBA3-208ENST00000465627 PLK4O00444 970 aa8.74□□□□□ -1.01
UBA3-208ENST00000465627 KPNA3O00505 521 aaPredicted RBP8.74□□□□□ -1.01
UBA3-208ENST00000465627 SPAG7O75391 227 aa8.74□□□□□ -1.01
UBA3-208ENST00000465627 SOD1P00441 154 aa8.74□□□□□ -1.01
UBA3-208ENST00000465627 C2P06681 752 aa8.74□□□□□ -1.01
UBA3-208ENST00000465627 DCNP07585 359 aaKnown RBP8.74□□□□□ -1.01
UBA3-208ENST00000465627 CHRNB1P11230 501 aa8.74□□□□□ -1.01
UBA3-208ENST00000465627 CYP2A6P11509 494 aaPredicted RBP8.74□□□□□ -1.01
UBA3-208ENST00000465627 FDXRP22570 491 aa8.74□□□□□ -1.01
UBA3-208ENST00000465627 SPAM1P38567 509 aa8.74□□□□□ -1.01
UBA3-208ENST00000465627 WASP42768 502 aa8.74□□□□□ -1.01
UBA3-208ENST00000465627 SERPINB8P50452 374 aa8.74□□□□□ -1.01
UBA3-208ENST00000465627 PGGT1BP53609 377 aa8.74□□□□□ -1.01
UBA3-208ENST00000465627 CDKN2DP55273 166 aa8.74□□□□□ -1.01
UBA3-208ENST00000465627 CBX1P83916 185 aa8.74□□□□□ -1.01
UBA3-208ENST00000465627 CACNG1Q06432 222 aa8.74□□□□□ -1.01
UBA3-208ENST00000465627 GRSF1Q12849 480 aaKnown RBP eCLIP8.74□□□□□ -1.01
UBA3-208ENST00000465627 CNTN1Q12860 1018 aa8.74□□□□□ -1.01
UBA3-208ENST00000465627 CHRNA6Q15825 494 aa8.74□□□□□ -1.01
UBA3-208ENST00000465627 CST6Q15828 149 aa8.74□□□□□ -1.01
UBA3-208ENST00000465627 DBN1Q16643 649 aa8.74□□□□□ -1.01
UBA3-208ENST00000465627 INSCQ1MX18 579 aa8.74□□□□□ -1.01
UBA3-208ENST00000465627 COL28A1Q2UY09 1125 aa8.74□□□□□ -1.01
UBA3-208ENST00000465627 POM121L1PQ3SYA9 428 aa8.74□□□□□ -1.01
UBA3-208ENST00000465627 GPR33Q49SQ1 333 aa8.74□□□□□ -1.01
UBA3-208ENST00000465627 HSF5Q4G112 596 aaPredicted RBP8.74□□□□□ -1.01
UBA3-208ENST00000465627 FBXO43Q4G163 708 aa8.74□□□□□ -1.01
UBA3-208ENST00000465627 CTSL3PQ5NE16 218 aa8.74□□□□□ -1.01
UBA3-208ENST00000465627 TMEM207Q6UWW9 146 aa8.74□□□□□ -1.01
UBA3-208ENST00000465627 Q6ZVL8 140 aa8.74□□□□□ -1.01
UBA3-208ENST00000465627 ERN2Q76MJ5 926 aaKnown RBP8.74□□□□□ -1.01
UBA3-208ENST00000465627 CYP2U1Q7Z449 544 aa8.74□□□□□ -1.01
UBA3-208ENST00000465627 SNX20Q7Z614 316 aa8.74□□□□□ -1.01
UBA3-208ENST00000465627 DSG4Q86SJ6 1040 aa8.74□□□□□ -1.01
UBA3-208ENST00000465627 TTC7BQ86TV6 843 aa8.74□□□□□ -1.01
UBA3-208ENST00000465627 NLRP8Q86W28 1048 aa8.74□□□□□ -1.01
UBA3-208ENST00000465627 TMEFF1Q8IYR6 380 aa8.74□□□□□ -1.01
UBA3-208ENST00000465627 CHPFQ8IZ52 775 aa8.74□□□□□ -1.01
UBA3-208ENST00000465627 CENPLQ8N0S6 344 aaPredicted RBP8.74□□□□□ -1.01
UBA3-208ENST00000465627 PLD6Q8N2A8 252 aaKnown RBP8.74□□□□□ -1.01
UBA3-208ENST00000465627 OR2T3Q8NH03 318 aa8.74□□□□□ -1.01
UBA3-208ENST00000465627 UBXN10Q96LJ8 280 aa8.74□□□□□ -1.01
UBA3-208ENST00000465627 SMC6Q96SB8 1091 aa8.74□□□□□ -1.01
UBA3-208ENST00000465627 AARSD1Q9BTE6 412 aaKnown RBP8.74□□□□□ -1.01
UBA3-208ENST00000465627 REPIN1Q9BWE0 567 aaKnown RBP8.74□□□□□ -1.01
UBA3-208ENST00000465627 C12orf65Q9H3J6 166 aaKnown RBP8.74□□□□□ -1.01
UBA3-208ENST00000465627 CAB39LQ9H9S4 337 aa8.74□□□□□ -1.01
UBA3-208ENST00000465627 FBRSQ9HAH7 460 aa8.74□□□□□ -1.01
UBA3-208ENST00000465627 PSD3Q9NYI0 1048 aa8.74□□□□□ -1.01
UBA3-208ENST00000465627 TXNDC16Q9P2K2 825 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms