RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 ARMC3Q5W041 872 aa20.09■□□□□ 0.81
SKA3-205ENST00000465471 SNX20Q7Z614 316 aa20.09■□□□□ 0.81
SKA3-205ENST00000465471 JAMLQ86YT9 394 aa20.09■□□□□ 0.81
SKA3-205ENST00000465471 ZNF778Q96MU6 729 aa20.09■□□□□ 0.81
SKA3-205ENST00000465471 GSDMCQ9BYG8 508 aa20.09■□□□□ 0.81
SKA3-205ENST00000465471 ASB8Q9H765 288 aa20.09■□□□□ 0.81
SKA3-205ENST00000465471 BFARQ9NZS9 450 aa20.09■□□□□ 0.81
SKA3-205ENST00000465471 DNALI1O14645 258 aaPredicted RBP20.08■□□□□ 0.81
SKA3-205ENST00000465471 GRID2O43424 1007 aa20.08■□□□□ 0.81
SKA3-205ENST00000465471 ITGALP20701 1170 aa20.08■□□□□ 0.81
SKA3-205ENST00000465471 ACP1P24666 158 aa20.08■□□□□ 0.81
SKA3-205ENST00000465471 SARNPP82979 210 aaKnown RBP20.08■□□□□ 0.81
SKA3-205ENST00000465471 TMEM115Q12893 351 aaPredicted RBP20.08■□□□□ 0.81
SKA3-205ENST00000465471 DNAJC3Q13217 504 aa20.08■□□□□ 0.81
SKA3-205ENST00000465471 GPR33Q49SQ1 333 aa20.08■□□□□ 0.81
SKA3-205ENST00000465471 N4BP2L1Q5TBK1 243 aaPredicted RBP20.08■□□□□ 0.81
SKA3-205ENST00000465471 OGFOD3Q6PK18 319 aa20.08■□□□□ 0.81
SKA3-205ENST00000465471 MICALCLQ6ZW33 695 aa20.08■□□□□ 0.81
SKA3-205ENST00000465471 TAF8Q7Z7C8 310 aa20.08■□□□□ 0.81
SKA3-205ENST00000465471 SLCO6A1Q86UG4 719 aa20.08■□□□□ 0.81
SKA3-205ENST00000465471 ZNF547Q8IVP9 402 aa20.08■□□□□ 0.81
SKA3-205ENST00000465471 PPIL6Q8IXY8 311 aa20.08■□□□□ 0.81
SKA3-205ENST00000465471 SLC35F3Q8IY50 421 aa20.08■□□□□ 0.81
SKA3-205ENST00000465471 PPHLN1Q8NEY8 458 aaKnown RBP20.08■□□□□ 0.81
SKA3-205ENST00000465471 SCG3Q8WXD2 468 aaKnown RBP20.08■□□□□ 0.81
SKA3-205ENST00000465471 ULK4Q96C45 1275 aa20.08■□□□□ 0.81
SKA3-205ENST00000465471 SERPINB12Q96P63 405 aa20.08■□□□□ 0.81
SKA3-205ENST00000465471 SUDS3Q9H7L9 328 aaPredicted RBP20.08■□□□□ 0.81
SKA3-205ENST00000465471 MRM3Q9HC36 420 aaKnown RBP20.08■□□□□ 0.81
SKA3-205ENST00000465471 XAB2Q9HCS7 855 aaKnown RBP20.08■□□□□ 0.81
SKA3-205ENST00000465471 TREX1Q9NSU2 369 aa20.08■□□□□ 0.81
SKA3-205ENST00000465471 NCKIPSDQ9NZQ3 722 aa20.08■□□□□ 0.81
SKA3-205ENST00000465471 SLC2A6Q9UGQ3 507 aa20.08■□□□□ 0.81
SKA3-205ENST00000465471 ASIC3Q9UHC3 531 aa20.08■□□□□ 0.81
SKA3-205ENST00000465471 CDC23Q9UJX2 597 aa20.08■□□□□ 0.81
SKA3-205ENST00000465471 PLEKHM1Q9Y4G2 1056 aa20.08■□□□□ 0.81
SKA3-205ENST00000465471 PCDHGA1Q9Y5H4 931 aa20.08■□□□□ 0.81
SKA3-205ENST00000465471 CCDC78A2IDD5 438 aa20.07■□□□□ 0.8
SKA3-205ENST00000465471 PRR19A6NJB7 356 aa20.07■□□□□ 0.8
SKA3-205ENST00000465471 KIF2AO00139 706 aaPredicted RBP20.07■□□□□ 0.8
SKA3-205ENST00000465471 TTI1O43156 1089 aa20.07■□□□□ 0.8
SKA3-205ENST00000465471 CDK14O94921 469 aa20.07■□□□□ 0.8
SKA3-205ENST00000465471 MGAT1P26572 445 aa20.07■□□□□ 0.8
SKA3-205ENST00000465471 AK4P27144 223 aaPredicted RBP20.07■□□□□ 0.8
SKA3-205ENST00000465471 FOXN2P32314 431 aa20.07■□□□□ 0.8
SKA3-205ENST00000465471 TERF1P54274 439 aa20.07■□□□□ 0.8
SKA3-205ENST00000465471 CRADDP78560 199 aa20.07■□□□□ 0.8
SKA3-205ENST00000465471 NXPE1Q8N323 547 aa20.07■□□□□ 0.8
SKA3-205ENST00000465471 ARL10Q8N8L6 244 aa20.07■□□□□ 0.8
SKA3-205ENST00000465471 SGSM3Q96HU1 749 aa20.07■□□□□ 0.8
SKA3-205ENST00000465471 KRT12Q99456 494 aa20.07■□□□□ 0.8
SKA3-205ENST00000465471 KIFC1Q9BW19 673 aa20.07■□□□□ 0.8
SKA3-205ENST00000465471 ZCCHC2Q9C0B9 1178 aaKnown RBP20.07■□□□□ 0.8
SKA3-205ENST00000465471 CHRAC1Q9NRG0 131 aa20.07■□□□□ 0.8
SKA3-205ENST00000465471 SYBUQ9NX95 663 aa20.07■□□□□ 0.8
SKA3-205ENST00000465471 TAAR2Q9P1P5 351 aa20.07■□□□□ 0.8
SKA3-205ENST00000465471 ZNHIT2Q9UHR6 403 aa20.07■□□□□ 0.8
SKA3-205ENST00000465471 GPR34Q9UPC5 381 aa20.07■□□□□ 0.8
SKA3-205ENST00000465471 DOLKQ9UPQ8 538 aa20.07■□□□□ 0.8
SKA3-205ENST00000465471 PRKAB1Q9Y478 270 aa20.07■□□□□ 0.8
SKA3-205ENST00000465471 GPSM3Q9Y4H4 160 aa20.07■□□□□ 0.8
SKA3-205ENST00000465471 SLC30A1Q9Y6M5 507 aa20.07■□□□□ 0.8
SKA3-205ENST00000465471 IGLV3-16A0A075B6K0 115 aa20.06■□□□□ 0.8
SKA3-205ENST00000465471 CCDC162PA2VCL2 907 aa20.06■□□□□ 0.8
SKA3-205ENST00000465471 NOBOXO60393 691 aa20.06■□□□□ 0.8
SKA3-205ENST00000465471 AVILO75366 819 aa20.06■□□□□ 0.8
SKA3-205ENST00000465471 CLCNKAP51800 687 aa20.06■□□□□ 0.8
SKA3-205ENST00000465471 B4GALNT1Q00973 533 aa20.06■□□□□ 0.8
SKA3-205ENST00000465471 CACNG1Q06432 222 aa20.06■□□□□ 0.8
SKA3-205ENST00000465471 C11orf96Q7Z7L8 435 aa20.06■□□□□ 0.8
SKA3-205ENST00000465471 LRRTM4Q86VH4 590 aa20.06■□□□□ 0.8
SKA3-205ENST00000465471 HOOK3Q86VS8 718 aa20.06■□□□□ 0.8
SKA3-205ENST00000465471 C17orf82Q86X59 251 aaPredicted RBP20.06■□□□□ 0.8
SKA3-205ENST00000465471 PIANPQ8IYJ0 282 aa20.06■□□□□ 0.8
SKA3-205ENST00000465471 RASGEF1AQ8N9B8 481 aa20.06■□□□□ 0.8
SKA3-205ENST00000465471 KYQ8NBH2 561 aa20.06■□□□□ 0.8
SKA3-205ENST00000465471 GPR156Q8NFN8 814 aa20.06■□□□□ 0.8
SKA3-205ENST00000465471 GDAP1Q8TB36 358 aa20.06■□□□□ 0.8
SKA3-205ENST00000465471 TRIM51Q9BSJ1 452 aa20.06■□□□□ 0.8
SKA3-205ENST00000465471 SPATS2LQ9NUQ6 558 aaKnown RBP20.06■□□□□ 0.8
SKA3-205ENST00000465471 CRLS1Q9UJA2 301 aa20.06■□□□□ 0.8
SKA3-205ENST00000465471 APOBEC2Q9Y235 224 aaKnown RBP20.06■□□□□ 0.8
SKA3-205ENST00000465471 KMOO15229 486 aa20.05■□□□□ 0.8
SKA3-205ENST00000465471 ADRB1P08588 477 aa20.05■□□□□ 0.8
SKA3-205ENST00000465471 PRSS56P0CW18 603 aa20.05■□□□□ 0.8
SKA3-205ENST00000465471 MYF5P13349 255 aa20.05■□□□□ 0.8
SKA3-205ENST00000465471 KCNA4P22459 653 aa20.05■□□□□ 0.8
SKA3-205ENST00000465471 ACRV1P26436 265 aa20.05■□□□□ 0.8
SKA3-205ENST00000465471 CDKN1CP49918 316 aaPredicted RBP20.05■□□□□ 0.8
SKA3-205ENST00000465471 CTSCP53634 463 aa20.05■□□□□ 0.8
SKA3-205ENST00000465471 ILKQ13418 452 aa20.05■□□□□ 0.8
SKA3-205ENST00000465471 SLC30A9Q6PML9 568 aa20.05■□□□□ 0.8
SKA3-205ENST00000465471 PCGF5Q86SE9 256 aa20.05■□□□□ 0.8
SKA3-205ENST00000465471 FAM46DQ8NEK8 389 aa20.05■□□□□ 0.8
SKA3-205ENST00000465471 HDAC10Q969S8 669 aa20.05■□□□□ 0.8
SKA3-205ENST00000465471 CCDC97Q96F63 343 aaPredicted RBP20.05■□□□□ 0.8
SKA3-205ENST00000465471 TIMM29Q9BSF4 260 aa20.05■□□□□ 0.8
SKA3-205ENST00000465471 FAM96AQ9H5X1 160 aa20.05■□□□□ 0.8
SKA3-205ENST00000465471 SOX13Q9UN79 622 aa20.05■□□□□ 0.8
SKA3-205ENST00000465471 NCOR2Q9Y618 2525 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms