RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 PHKG1Q16816 387 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 GEN1Q17RS7 908 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 ZIK1Q3SY52 487 aaPredicted RBP7.24□□□□□ -1.25
USP48-206ENST00000464577 ZNF362Q5T0B9 420 aaPredicted RBP7.24□□□□□ -1.25
USP48-206ENST00000464577 MARCH8Q5T0T0 291 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 MANEALQ5VSG8 457 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 PRAMEF18Q5VWM3 479 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 IQSEC1Q6DN90 963 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 GLYATQ6IB77 296 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 PLEKHG7Q6ZR37 379 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 GPRIN1Q7Z2K8 1008 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 BTLAQ7Z6A9 289 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 HID1Q8IV36 788 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 SCML4Q8N228 414 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.24□□□□□ -1.25
USP48-206ENST00000464577 ZNF555Q8NEP9 628 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 PHF10Q8WUB8 498 aaKnown RBP7.24□□□□□ -1.25
USP48-206ENST00000464577 TRIB2Q92519 343 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 FATE1Q969F0 183 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 ZNF566Q969W8 418 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 CCDC115Q96NT0 180 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 ATOH8Q96SQ7 321 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 CTRCQ99895 268 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 C16orf70Q9BSU1 422 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 HGH1Q9BTY7 390 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 TMEM121BQ9BXQ6 578 aaPredicted RBP7.24□□□□□ -1.25
USP48-206ENST00000464577 SLC39A8Q9C0K1 460 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 SLC25A51Q9H1U9 297 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 ADNPQ9H2P0 1102 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 R3HDMLQ9H3Y0 253 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 ATP13A3Q9H7F0 1226 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 ANKHQ9HCJ1 492 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 NECTIN3Q9NQS3 549 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 RGS18Q9NS28 235 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 FAM118AQ9NWS6 357 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 COMMD8Q9NX08 183 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 SPATA7Q9P0W8 599 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 FNIP2Q9P278 1114 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 WARS2Q9UGM6 360 aaKnown RBP7.24□□□□□ -1.25
USP48-206ENST00000464577 SLC27A5Q9Y2P5 690 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 TNS1Q9HBL0 1735 aaKnown RBP7.24□□□□□ -1.25
USP48-206ENST00000464577 RBM47A0AV96 593 aaKnown RBP7.24□□□□□ -1.25
USP48-206ENST00000464577 ZNF99A8MXY4 864 aaPredicted RBP7.24□□□□□ -1.25
USP48-206ENST00000464577 HHLA1C9JL84 531 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 H3BMM5 538 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 PPP6CO00743 305 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 MSI1O43347 362 aaKnown RBP7.24□□□□□ -1.25
USP48-206ENST00000464577 KERAO60938 352 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 NDUFS2O75306 463 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 SIX3O95343 332 aaPredicted RBP7.24□□□□□ -1.25
USP48-206ENST00000464577 OXSR1O95747 527 aaPredicted RBP7.24□□□□□ -1.25
USP48-206ENST00000464577 IGLV3-25P01717 112 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 MT-ND1P03886 318 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 RPS17P08708 135 aaKnown RBP7.24□□□□□ -1.25
USP48-206ENST00000464577 CCDC159P0C7I6 412 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 ZNF286BP0CG31 522 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 TCF3P15923 654 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 GGT1P19440 569 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 AKAP5P24588 427 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 GP2P55259 537 aaKnown RBP7.24□□□□□ -1.25
USP48-206ENST00000464577 PPP2R2BQ00005 443 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 CLCQ05315 142 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 CHRNB3Q05901 458 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 CDC20Q12834 499 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 OR4D1Q15615 310 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 NDUFA5Q16718 116 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 DGUOKQ16854 277 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 DPY19L1Q2PZI1 675 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 FUT11Q495W5 492 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 BRMS1LQ5PSV4 323 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 LDLRAP1Q5SW96 308 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 BEND5Q7L4P6 421 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 SLCO6A1Q86UG4 719 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 STK32CQ86UX6 486 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 PIM3Q86V86 326 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 ZFAND4Q86XD8 727 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 ZDHHC13Q8IUH4 622 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 ZMIZ2Q8NF64 920 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 OR6Q1Q8NGQ2 317 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 GPR150Q8NGU9 434 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 ITFG1Q8TB96 612 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 FBLIM1Q8WUP2 373 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 VPS33AQ96AX1 596 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 TMEM74Q96NL1 305 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 KCNA7Q96RP8 456 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 NODALQ96S42 347 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 TMEM209Q96SK2 561 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 RBM4BQ9BQ04 359 aaKnown RBP7.24□□□□□ -1.25
USP48-206ENST00000464577 TRIM62Q9BVG3 475 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 RBM4Q9BWF3 364 aaKnown RBP7.24□□□□□ -1.25
USP48-206ENST00000464577 OSBPL10Q9BXB5 764 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 C1QTNF3Q9BXJ4 246 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 UGT2B28Q9BY64 529 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 TRIM8Q9BZR9 551 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 CRTAC1Q9NQ79 661 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 THG1LQ9NWX6 298 aaKnown RBP7.24□□□□□ -1.25
USP48-206ENST00000464577 DNAJB9Q9UBS3 223 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 SUN2Q9UH99 717 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 ERVK-11Q9UQG0 969 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 BTRCQ9Y297 605 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms