RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 NCKIPSDQ9NZQ3 722 aa14.35□□□□□ -0.11
SQSTM1-205ENST00000464493 RIMKLBQ9ULI2 386 aa14.35□□□□□ -0.11
SQSTM1-205ENST00000464493 GPR34Q9UPC5 381 aa14.35□□□□□ -0.11
SQSTM1-205ENST00000464493 APOBEC2Q9Y235 224 aaKnown RBP14.35□□□□□ -0.11
SQSTM1-205ENST00000464493 PRKAB1Q9Y478 270 aa14.35□□□□□ -0.11
SQSTM1-205ENST00000464493 TCAF1Q9Y4C2 921 aa14.35□□□□□ -0.11
SQSTM1-205ENST00000464493 PLEKHM1Q9Y4G2 1056 aa14.35□□□□□ -0.11
SQSTM1-205ENST00000464493 PCYT1BQ9Y5K3 369 aaPredicted RBP14.35□□□□□ -0.11
SQSTM1-205ENST00000464493 SPEGQ15772 3267 aa14.35□□□□□ -0.11
SQSTM1-205ENST00000464493 KIF2AO00139 706 aaPredicted RBP14.34□□□□□ -0.11
SQSTM1-205ENST00000464493 CHUKO15111 745 aa14.34□□□□□ -0.11
SQSTM1-205ENST00000464493 TMEM63AO94886 807 aa14.34□□□□□ -0.11
SQSTM1-205ENST00000464493 CKMT1AP12532 417 aa14.34□□□□□ -0.11
SQSTM1-205ENST00000464493 MYF5P13349 255 aa14.34□□□□□ -0.11
SQSTM1-205ENST00000464493 ACP1P24666 158 aa14.34□□□□□ -0.11
SQSTM1-205ENST00000464493 MGAT1P26572 445 aa14.34□□□□□ -0.11
SQSTM1-205ENST00000464493 AK4P27144 223 aaPredicted RBP14.34□□□□□ -0.11
SQSTM1-205ENST00000464493 RPIAP49247 311 aa14.34□□□□□ -0.11
SQSTM1-205ENST00000464493 DUSP3P51452 185 aaPredicted RBP14.34□□□□□ -0.11
SQSTM1-205ENST00000464493 CRADDP78560 199 aa14.34□□□□□ -0.11
SQSTM1-205ENST00000464493 GTF2H3Q13889 308 aa14.34□□□□□ -0.11
SQSTM1-205ENST00000464493 LRP8Q14114 963 aa14.34□□□□□ -0.11
SQSTM1-205ENST00000464493 DHX34Q14147 1143 aaKnown RBP14.34□□□□□ -0.11
SQSTM1-205ENST00000464493 GPR33Q49SQ1 333 aa14.34□□□□□ -0.11
SQSTM1-205ENST00000464493 ZRANB3Q5FWF4 1079 aa14.34□□□□□ -0.11
SQSTM1-205ENST00000464493 CHST15Q7LFX5 561 aaPredicted RBP14.34□□□□□ -0.11
SQSTM1-205ENST00000464493 PCGF5Q86SE9 256 aa14.34□□□□□ -0.11
SQSTM1-205ENST00000464493 CAND1Q86VP6 1230 aaKnown RBP14.34□□□□□ -0.11
SQSTM1-205ENST00000464493 PPIL6Q8IXY8 311 aa14.34□□□□□ -0.11
SQSTM1-205ENST00000464493 NAT8LQ8N9F0 302 aa14.34□□□□□ -0.11
SQSTM1-205ENST00000464493 OR13J1Q8NGT2 312 aa14.34□□□□□ -0.11
SQSTM1-205ENST00000464493 ZNF592Q92610 1267 aa14.34□□□□□ -0.11
SQSTM1-205ENST00000464493 PEX13Q92968 403 aa14.34□□□□□ -0.11
SQSTM1-205ENST00000464493 ULK4Q96C45 1275 aa14.34□□□□□ -0.11
SQSTM1-205ENST00000464493 ZNF778Q96MU6 729 aa14.34□□□□□ -0.11
SQSTM1-205ENST00000464493 ZCCHC2Q9C0B9 1178 aaKnown RBP14.34□□□□□ -0.11
SQSTM1-205ENST00000464493 DPEP2Q9H4A9 486 aa14.34□□□□□ -0.11
SQSTM1-205ENST00000464493 FAM96AQ9H5X1 160 aa14.34□□□□□ -0.11
SQSTM1-205ENST00000464493 CHRAC1Q9NRG0 131 aa14.34□□□□□ -0.11
SQSTM1-205ENST00000464493 EVA1BQ9NVM1 165 aa14.34□□□□□ -0.11
SQSTM1-205ENST00000464493 TAAR2Q9P1P5 351 aa14.34□□□□□ -0.11
SQSTM1-205ENST00000464493 SIRPGQ9P1W8 387 aa14.34□□□□□ -0.11
SQSTM1-205ENST00000464493 GULP1Q9UBP9 304 aa14.34□□□□□ -0.11
SQSTM1-205ENST00000464493 SLC2A6Q9UGQ3 507 aa14.34□□□□□ -0.11
SQSTM1-205ENST00000464493 CRLS1Q9UJA2 301 aa14.34□□□□□ -0.11
SQSTM1-205ENST00000464493 ST14Q9Y5Y6 855 aa14.34□□□□□ -0.11
SQSTM1-205ENST00000464493 PLXNB3Q9ULL4 1909 aa14.34□□□□□ -0.11
SQSTM1-205ENST00000464493 LY6G6EA0A0G2JKS1 128 aa14.33□□□□□ -0.12
SQSTM1-205ENST00000464493 CCDC162PA2VCL2 907 aa14.33□□□□□ -0.12
SQSTM1-205ENST00000464493 GOLGA8MH3BSY2 632 aa14.33□□□□□ -0.12
SQSTM1-205ENST00000464493 DNALI1O14645 258 aaPredicted RBP14.33□□□□□ -0.12
SQSTM1-205ENST00000464493 KMOO15229 486 aa14.33□□□□□ -0.12
SQSTM1-205ENST00000464493 TTI1O43156 1089 aa14.33□□□□□ -0.12
SQSTM1-205ENST00000464493 AVILO75366 819 aa14.33□□□□□ -0.12
SQSTM1-205ENST00000464493 URI1O94763 535 aaPredicted RBP14.33□□□□□ -0.12
SQSTM1-205ENST00000464493 MLNP12872 115 aa14.33□□□□□ -0.12
SQSTM1-205ENST00000464493 MSH3P20585 1137 aa14.33□□□□□ -0.12
SQSTM1-205ENST00000464493 AKT1P31749 480 aa14.33□□□□□ -0.12
SQSTM1-205ENST00000464493 ACTR1BP42025 376 aa14.33□□□□□ -0.12
SQSTM1-205ENST00000464493 ACADVLP49748 655 aa14.33□□□□□ -0.12
SQSTM1-205ENST00000464493 ARSDP51689 593 aa14.33□□□□□ -0.12
SQSTM1-205ENST00000464493 ACTR1AP61163 376 aa14.33□□□□□ -0.12
SQSTM1-205ENST00000464493 ACVR1Q04771 509 aa14.33□□□□□ -0.12
SQSTM1-205ENST00000464493 CACNG1Q06432 222 aa14.33□□□□□ -0.12
SQSTM1-205ENST00000464493 NR0B2Q15466 257 aa14.33□□□□□ -0.12
SQSTM1-205ENST00000464493 CCDC157Q569K6 752 aa14.33□□□□□ -0.12
SQSTM1-205ENST00000464493 RNASEH2BQ5TBB1 312 aaKnown RBP14.33□□□□□ -0.12
SQSTM1-205ENST00000464493 OGFOD3Q6PK18 319 aa14.33□□□□□ -0.12
SQSTM1-205ENST00000464493 SLC30A9Q6PML9 568 aa14.33□□□□□ -0.12
SQSTM1-205ENST00000464493 LRRTM4Q86VH4 590 aa14.33□□□□□ -0.12
SQSTM1-205ENST00000464493 JAMLQ86YT9 394 aa14.33□□□□□ -0.12
SQSTM1-205ENST00000464493 SLC35F3Q8IY50 421 aa14.33□□□□□ -0.12
SQSTM1-205ENST00000464493 ARL10Q8N8L6 244 aa14.33□□□□□ -0.12
SQSTM1-205ENST00000464493 PNPLA1Q8N8W4 532 aa14.33□□□□□ -0.12
SQSTM1-205ENST00000464493 RASGEF1AQ8N9B8 481 aa14.33□□□□□ -0.12
SQSTM1-205ENST00000464493 HDAC10Q969S8 669 aa14.33□□□□□ -0.12
SQSTM1-205ENST00000464493 XAB2Q9HCS7 855 aaKnown RBP14.33□□□□□ -0.12
SQSTM1-205ENST00000464493 SPATS2LQ9NUQ6 558 aaKnown RBP14.33□□□□□ -0.12
SQSTM1-205ENST00000464493 CDC23Q9UJX2 597 aa14.33□□□□□ -0.12
SQSTM1-205ENST00000464493 PCDHGA1Q9Y5H4 931 aa14.33□□□□□ -0.12
SQSTM1-205ENST00000464493 U3KQA8 63 aa14.33□□□□□ -0.12
SQSTM1-205ENST00000464493 ARHGEF17Q96PE2 2063 aaPredicted RBP14.33□□□□□ -0.12
SQSTM1-205ENST00000464493 TRBV5-4A0A0C4DH59 114 aa14.32□□□□□ -0.12
SQSTM1-205ENST00000464493 SDR42E2A6NKP2 422 aa14.32□□□□□ -0.12
SQSTM1-205ENST00000464493 DKK1O94907 266 aa14.32□□□□□ -0.12
SQSTM1-205ENST00000464493 TRIM16O95361 564 aa14.32□□□□□ -0.12
SQSTM1-205ENST00000464493 ACP5P13686 325 aa14.32□□□□□ -0.12
SQSTM1-205ENST00000464493 IVDP26440 423 aa14.32□□□□□ -0.12
SQSTM1-205ENST00000464493 CDKN1CP49918 316 aaPredicted RBP14.32□□□□□ -0.12
SQSTM1-205ENST00000464493 ILKQ13418 452 aa14.32□□□□□ -0.12
SQSTM1-205ENST00000464493 TMEM220Q6QAJ8 160 aa14.32□□□□□ -0.12
SQSTM1-205ENST00000464493 CRTC3Q6UUV7 619 aa14.32□□□□□ -0.12
SQSTM1-205ENST00000464493 TAS2R42Q7RTR8 314 aa14.32□□□□□ -0.12
SQSTM1-205ENST00000464493 TRAPPC5Q8IUR0 188 aa14.32□□□□□ -0.12
SQSTM1-205ENST00000464493 ZNF547Q8IVP9 402 aa14.32□□□□□ -0.12
SQSTM1-205ENST00000464493 NXPE1Q8N323 547 aa14.32□□□□□ -0.12
SQSTM1-205ENST00000464493 GPR156Q8NFN8 814 aa14.32□□□□□ -0.12
SQSTM1-205ENST00000464493 OR6P1Q8NGX9 317 aa14.32□□□□□ -0.12
SQSTM1-205ENST00000464493 ZDHHC1Q8WTX9 485 aa14.32□□□□□ -0.12
SQSTM1-205ENST00000464493 HEXDCQ8WVB3 486 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms