RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 RBM4Q9BWF3 364 aaKnown RBP4.03□□□□□ -1.76
ITGB1-208ENST00000464001 C1QTNF5Q9BXJ0 243 aa4.03□□□□□ -1.76
ITGB1-208ENST00000464001 ITPAQ9BY32 194 aa4.03□□□□□ -1.76
ITGB1-208ENST00000464001 BARHL1Q9BZE3 327 aa4.03□□□□□ -1.76
ITGB1-208ENST00000464001 USP44Q9H0E7 712 aa4.03□□□□□ -1.76
ITGB1-208ENST00000464001 CSTL1Q9H114 145 aa4.03□□□□□ -1.76
ITGB1-208ENST00000464001 ESRP2Q9H6T0 727 aaKnown RBP4.03□□□□□ -1.76
ITGB1-208ENST00000464001 MAGEE1Q9HCI5 957 aa4.03□□□□□ -1.76
ITGB1-208ENST00000464001 DDX4Q9NQI0 724 aaKnown RBP4.03□□□□□ -1.76
ITGB1-208ENST00000464001 EIF2B3Q9NR50 452 aaKnown RBP4.03□□□□□ -1.76
ITGB1-208ENST00000464001 SEPT11Q9NVA2 429 aaKnown RBP4.03□□□□□ -1.76
ITGB1-208ENST00000464001 WDR35Q9P2L0 1181 aa4.03□□□□□ -1.76
ITGB1-208ENST00000464001 CTNNAL1Q9UBT7 734 aa4.03□□□□□ -1.76
ITGB1-208ENST00000464001 PADI1Q9ULC6 663 aa4.03□□□□□ -1.76
ITGB1-208ENST00000464001 RABL2BQ9UNT1 228 aa4.03□□□□□ -1.76
ITGB1-208ENST00000464001 FAM96BQ9Y3D0 163 aa4.03□□□□□ -1.76
ITGB1-208ENST00000464001 CYP46A1Q9Y6A2 500 aa4.03□□□□□ -1.76
ITGB1-208ENST00000464001 STON1Q9Y6Q2 735 aa4.03□□□□□ -1.76
ITGB1-208ENST00000464001 PIAS3Q9Y6X2 628 aa4.03□□□□□ -1.76
ITGB1-208ENST00000464001 FLT1P17948 1338 aa4.02□□□□□ -1.77
ITGB1-208ENST00000464001 DVL1O14640 695 aa4.02□□□□□ -1.77
ITGB1-208ENST00000464001 BCAT2O15382 392 aaPredicted RBP4.02□□□□□ -1.77
ITGB1-208ENST00000464001 BEST1O76090 585 aa4.02□□□□□ -1.77
ITGB1-208ENST00000464001 GOSR1O95249 250 aa4.02□□□□□ -1.77
ITGB1-208ENST00000464001 MT-CYBP00156 380 aaPredicted RBP4.02□□□□□ -1.77
ITGB1-208ENST00000464001 G6PDP11413 515 aa4.02□□□□□ -1.77
ITGB1-208ENST00000464001 FGF5P12034 268 aa4.02□□□□□ -1.77
ITGB1-208ENST00000464001 S1PR1P21453 382 aa4.02□□□□□ -1.77
ITGB1-208ENST00000464001 EIF2S3P41091 472 aaKnown RBP4.02□□□□□ -1.77
ITGB1-208ENST00000464001 CD86P42081 329 aa4.02□□□□□ -1.77
ITGB1-208ENST00000464001 TAF6P49848 677 aa4.02□□□□□ -1.77
ITGB1-208ENST00000464001 DVL1P1P54792 670 aaPredicted RBP4.02□□□□□ -1.77
ITGB1-208ENST00000464001 PMP22Q01453 160 aa4.02□□□□□ -1.77
ITGB1-208ENST00000464001 SREBF2Q12772 1141 aa4.02□□□□□ -1.77
ITGB1-208ENST00000464001 LRMPQ12912 555 aa4.02□□□□□ -1.77
ITGB1-208ENST00000464001 ACVR2BQ13705 512 aa4.02□□□□□ -1.77
ITGB1-208ENST00000464001 HIST2H2ACQ16777 129 aaPredicted RBP4.02□□□□□ -1.77
ITGB1-208ENST00000464001 TCTN1Q2MV58 587 aa4.02□□□□□ -1.77
ITGB1-208ENST00000464001 SGO1Q5FBB7 561 aa4.02□□□□□ -1.77
ITGB1-208ENST00000464001 C1orf141Q5JVX7 400 aa4.02□□□□□ -1.77
ITGB1-208ENST00000464001 ANKRD54Q6NXT1 300 aa4.02□□□□□ -1.77
ITGB1-208ENST00000464001 TATDN1Q6P1N9 297 aa4.02□□□□□ -1.77
ITGB1-208ENST00000464001 KCTD18Q6PI47 426 aaPredicted RBP4.02□□□□□ -1.77
ITGB1-208ENST00000464001 OR8H3Q8N146 312 aa4.02□□□□□ -1.77
ITGB1-208ENST00000464001 KCTD6Q8NC69 237 aa4.02□□□□□ -1.77
ITGB1-208ENST00000464001 Q8NFD4 153 aa4.02□□□□□ -1.77
ITGB1-208ENST00000464001 ZNF501Q96CX3 271 aaPredicted RBP4.02□□□□□ -1.77
ITGB1-208ENST00000464001 SH3GL2Q99962 352 aa4.02□□□□□ -1.77
ITGB1-208ENST00000464001 BPIFA1Q9NP55 256 aa4.02□□□□□ -1.77
ITGB1-208ENST00000464001 FAM118AQ9NWS6 357 aa4.02□□□□□ -1.77
ITGB1-208ENST00000464001 DDX43Q9NXZ2 648 aaKnown RBP4.02□□□□□ -1.77
ITGB1-208ENST00000464001 ZNF215Q9UL58 517 aaPredicted RBP4.02□□□□□ -1.77
ITGB1-208ENST00000464001 SNX8Q9Y5X2 465 aa4.02□□□□□ -1.77
ITGB1-208ENST00000464001 TMEM202A6NGA9 273 aa4.01□□□□□ -1.77
ITGB1-208ENST00000464001 AGAP14A8MT82 685 aa4.01□□□□□ -1.77
ITGB1-208ENST00000464001 TEX22C9J3V5 150 aa4.01□□□□□ -1.77
ITGB1-208ENST00000464001 CPLX1O14810 134 aa4.01□□□□□ -1.77
ITGB1-208ENST00000464001 B3GALNT1O75752 331 aa4.01□□□□□ -1.77
ITGB1-208ENST00000464001 HEXAP06865 529 aa4.01□□□□□ -1.77
ITGB1-208ENST00000464001 ACADMP11310 421 aa4.01□□□□□ -1.77
ITGB1-208ENST00000464001 HADHAP40939 763 aa4.01□□□□□ -1.77
ITGB1-208ENST00000464001 RGS2P41220 211 aa4.01□□□□□ -1.77
ITGB1-208ENST00000464001 PPP5CP53041 499 aa4.01□□□□□ -1.77
ITGB1-208ENST00000464001 HNRNPH2P55795 449 aaKnown RBP4.01□□□□□ -1.77
ITGB1-208ENST00000464001 EFNB1P98172 346 aa4.01□□□□□ -1.77
ITGB1-208ENST00000464001 PDE1BQ01064 536 aa4.01□□□□□ -1.77
ITGB1-208ENST00000464001 MC1RQ01726 317 aa4.01□□□□□ -1.77
ITGB1-208ENST00000464001 GALNT2Q10471 571 aa4.01□□□□□ -1.77
ITGB1-208ENST00000464001 AP1B1Q10567 949 aa4.01□□□□□ -1.77
ITGB1-208ENST00000464001 GRIK3Q13003 919 aa4.01□□□□□ -1.77
ITGB1-208ENST00000464001 FCN2Q15485 313 aa4.01□□□□□ -1.77
ITGB1-208ENST00000464001 TBCEQ15813 527 aaPredicted RBP4.01□□□□□ -1.77
ITGB1-208ENST00000464001 TMEM30BQ3MIR4 351 aa4.01□□□□□ -1.77
ITGB1-208ENST00000464001 C14orf177Q52M58 125 aa4.01□□□□□ -1.77
ITGB1-208ENST00000464001 ZNF667Q5HYK9 610 aa4.01□□□□□ -1.77
ITGB1-208ENST00000464001 PDSS1Q5T2R2 415 aa4.01□□□□□ -1.77
ITGB1-208ENST00000464001 GALNT17Q6IS24 598 aa4.01□□□□□ -1.77
ITGB1-208ENST00000464001 SDCCAG8Q86SQ7 713 aaPredicted RBP4.01□□□□□ -1.77
ITGB1-208ENST00000464001 C1orf87Q8N0U7 546 aa4.01□□□□□ -1.77
ITGB1-208ENST00000464001 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.01□□□□□ -1.77
ITGB1-208ENST00000464001 CNBD1Q8NA66 436 aa4.01□□□□□ -1.77
ITGB1-208ENST00000464001 SLC24A4Q8NFF2 622 aa4.01□□□□□ -1.77
ITGB1-208ENST00000464001 FAM76AQ8TAV0 307 aa4.01□□□□□ -1.77
ITGB1-208ENST00000464001 TAF15Q92804 592 aaKnown RBP eCLIP4.01□□□□□ -1.77
ITGB1-208ENST00000464001 ZNF583Q96ND8 569 aa4.01□□□□□ -1.77
ITGB1-208ENST00000464001 EGLN1Q9GZT9 426 aa4.01□□□□□ -1.77
ITGB1-208ENST00000464001 C2orf40Q9H1Z8 148 aa4.01□□□□□ -1.77
ITGB1-208ENST00000464001 TRPV4Q9HBA0 871 aa4.01□□□□□ -1.77
ITGB1-208ENST00000464001 XPO7Q9UIA9 1087 aaKnown RBP4.01□□□□□ -1.77
ITGB1-208ENST00000464001 TBX20Q9UMR3 447 aa4.01□□□□□ -1.77
ITGB1-208ENST00000464001 NAALADL1Q9UQQ1 740 aa4.01□□□□□ -1.77
ITGB1-208ENST00000464001 ZFP37Q9Y6Q3 630 aaPredicted RBP4.01□□□□□ -1.77
ITGB1-208ENST00000464001 PASKQ96RG2 1323 aa4□□□□□ -1.77
ITGB1-208ENST00000464001 ERI2A8K979 691 aaKnown RBP4□□□□□ -1.77
ITGB1-208ENST00000464001 PI4K2BG5E9Z4 385 aa4□□□□□ -1.77
ITGB1-208ENST00000464001 H0Y626 953 aa4□□□□□ -1.77
ITGB1-208ENST00000464001 UBE2CO00762 179 aa4□□□□□ -1.77
ITGB1-208ENST00000464001 GUCY1B2O75343 617 aa4□□□□□ -1.77
ITGB1-208ENST00000464001 TBCAO75347 108 aaKnown RBP4□□□□□ -1.77
ITGB1-208ENST00000464001 CYC1P08574 325 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms