RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 OASLQ15646 514 aaKnown RBP12.81□□□□□ -0.36
XRN1-203ENST00000463916 PARP6Q2NL67 630 aa12.81□□□□□ -0.36
XRN1-203ENST00000463916 C3orf38Q5JPI3 329 aa12.81□□□□□ -0.36
XRN1-203ENST00000463916 CRTC3Q6UUV7 619 aa12.81□□□□□ -0.36
XRN1-203ENST00000463916 ARHGEF18Q6ZSZ5 1173 aa12.81□□□□□ -0.36
XRN1-203ENST00000463916 PRUNE1Q86TP1 453 aa12.81□□□□□ -0.36
XRN1-203ENST00000463916 PHYKPLQ8IUZ5 450 aa12.81□□□□□ -0.36
XRN1-203ENST00000463916 WDR48Q8TAF3 677 aa12.81□□□□□ -0.36
XRN1-203ENST00000463916 SLC37A2Q8TED4 501 aa12.81□□□□□ -0.36
XRN1-203ENST00000463916 TLR10Q9BXR5 811 aa12.81□□□□□ -0.36
XRN1-203ENST00000463916 POLR1BQ9H9Y6 1135 aa12.81□□□□□ -0.36
XRN1-203ENST00000463916 A6NCN8 305 aa12.81□□□□□ -0.36
XRN1-203ENST00000463916 TMEM115Q12893 351 aaPredicted RBP12.81□□□□□ -0.36
XRN1-203ENST00000463916 NR1D2Q14995 579 aa12.81□□□□□ -0.36
XRN1-203ENST00000463916 SIX1Q15475 284 aaPredicted RBP12.81□□□□□ -0.36
XRN1-203ENST00000463916 TAF1AQ15573 450 aaPredicted RBP12.81□□□□□ -0.36
XRN1-203ENST00000463916 PLA2G4EQ3MJ16 856 aa12.81□□□□□ -0.36
XRN1-203ENST00000463916 SEL1L2Q5TEA6 688 aa12.81□□□□□ -0.36
XRN1-203ENST00000463916 USP53Q70EK8 1073 aa12.81□□□□□ -0.36
XRN1-203ENST00000463916 ZNF761Q86XN6 746 aaPredicted RBP12.81□□□□□ -0.36
XRN1-203ENST00000463916 SFRP1Q8N474 314 aa12.81□□□□□ -0.36
XRN1-203ENST00000463916 OR4K2Q8NGD2 314 aa12.81□□□□□ -0.36
XRN1-203ENST00000463916 TBL1YQ9BQ87 522 aa12.81□□□□□ -0.36
XRN1-203ENST00000463916 ARNT2Q9HBZ2 717 aa12.81□□□□□ -0.36
XRN1-203ENST00000463916 PRDM8Q9NQV8 689 aa12.81□□□□□ -0.36
XRN1-203ENST00000463916 PKP3Q9Y446 797 aa12.81□□□□□ -0.36
XRN1-203ENST00000463916 GLYATL1P3A0A0U1RQE8 302 aa12.8□□□□□ -0.36
XRN1-203ENST00000463916 RHPN2P1A8MT19 583 aa12.8□□□□□ -0.36
XRN1-203ENST00000463916 AGRPO00253 132 aa12.8□□□□□ -0.36
XRN1-203ENST00000463916 STX7O15400 261 aaKnown RBP12.8□□□□□ -0.36
XRN1-203ENST00000463916 SNX2O60749 519 aa12.8□□□□□ -0.36
XRN1-203ENST00000463916 CDK14O94921 469 aa12.8□□□□□ -0.36
XRN1-203ENST00000463916 ETS1P14921 441 aa12.8□□□□□ -0.36
XRN1-203ENST00000463916 TPH1P17752 444 aa12.8□□□□□ -0.36
XRN1-203ENST00000463916 LPOP22079 712 aaPredicted RBP12.8□□□□□ -0.36
XRN1-203ENST00000463916 SNX1Q13596 522 aa12.8□□□□□ -0.36
XRN1-203ENST00000463916 KCTD19Q17RG1 926 aaPredicted RBP12.8□□□□□ -0.36
XRN1-203ENST00000463916 AMZ1Q400G9 498 aa12.8□□□□□ -0.36
XRN1-203ENST00000463916 NKAIN2Q5VXU1 208 aa12.8□□□□□ -0.36
XRN1-203ENST00000463916 IYDQ6PHW0 289 aa12.8□□□□□ -0.36
XRN1-203ENST00000463916 C19orf48Q6RUI8 117 aa12.8□□□□□ -0.36
XRN1-203ENST00000463916 ZNF574Q6ZN55 896 aaPredicted RBP12.8□□□□□ -0.36
XRN1-203ENST00000463916 C11orf96Q7Z7L8 435 aa12.8□□□□□ -0.36
XRN1-203ENST00000463916 OR13C4Q8NGS5 318 aa12.8□□□□□ -0.36
XRN1-203ENST00000463916 DTX3LQ8TDB6 740 aa12.8□□□□□ -0.36
XRN1-203ENST00000463916 BRSK1Q8TDC3 778 aa12.8□□□□□ -0.36
XRN1-203ENST00000463916 NAT14Q8WUY8 206 aa12.8□□□□□ -0.36
XRN1-203ENST00000463916 HNRNPLLQ8WVV9 542 aaKnown RBP12.8□□□□□ -0.36
XRN1-203ENST00000463916 RTP4Q96DX8 246 aa12.8□□□□□ -0.36
XRN1-203ENST00000463916 ASCL3Q9NQ33 180 aa12.8□□□□□ -0.36
XRN1-203ENST00000463916 KLC4Q9NSK0 619 aa12.8□□□□□ -0.36
XRN1-203ENST00000463916 PIH1D1Q9NWS0 290 aaKnown RBP12.8□□□□□ -0.36
XRN1-203ENST00000463916 MGAQ8IWI9 3026 aa12.8□□□□□ -0.36
XRN1-203ENST00000463916 PRR19A6NJB7 356 aa12.79□□□□□ -0.36
XRN1-203ENST00000463916 CCL22O00626 93 aa12.79□□□□□ -0.36
XRN1-203ENST00000463916 CD1CP29017 333 aa12.79□□□□□ -0.36
XRN1-203ENST00000463916 CFHR1Q03591 330 aa12.79□□□□□ -0.36
XRN1-203ENST00000463916 ZFP36L1Q07352 338 aaKnown RBP12.79□□□□□ -0.36
XRN1-203ENST00000463916 TBC1D25Q3MII6 688 aa12.79□□□□□ -0.36
XRN1-203ENST00000463916 FOXR1Q6PIV2 292 aa12.79□□□□□ -0.36
XRN1-203ENST00000463916 RASGEF1AQ8N9B8 481 aa12.79□□□□□ -0.36
XRN1-203ENST00000463916 GLIS1Q8NBF1 620 aa12.79□□□□□ -0.36
XRN1-203ENST00000463916 GDAP1Q8TB36 358 aa12.79□□□□□ -0.36
XRN1-203ENST00000463916 FGF11Q92914 225 aa12.79□□□□□ -0.36
XRN1-203ENST00000463916 GRAMD1AQ96CP6 724 aa12.79□□□□□ -0.36
XRN1-203ENST00000463916 SLC46A1Q96NT5 459 aa12.79□□□□□ -0.36
XRN1-203ENST00000463916 DCBLD2Q96PD2 775 aa12.79□□□□□ -0.36
XRN1-203ENST00000463916 NUDT22Q9BRQ3 303 aa12.79□□□□□ -0.36
XRN1-203ENST00000463916 SEMA6CQ9H3T2 930 aa12.79□□□□□ -0.36
XRN1-203ENST00000463916 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.79□□□□□ -0.36
XRN1-203ENST00000463916 SCHIP1Q9P0W5 487 aaPredicted RBP12.79□□□□□ -0.36
XRN1-203ENST00000463916 FKBPLQ9UIM3 349 aa12.79□□□□□ -0.36
XRN1-203ENST00000463916 A0A087WV48 116 aa12.79□□□□□ -0.36
XRN1-203ENST00000463916 C2orf81A6NN90 581 aa12.79□□□□□ -0.36
XRN1-203ENST00000463916 GPR89AB7ZAQ6 455 aa12.79□□□□□ -0.36
XRN1-203ENST00000463916 LDB2O43679 373 aa12.79□□□□□ -0.36
XRN1-203ENST00000463916 VEGFDO43915 354 aa12.79□□□□□ -0.36
XRN1-203ENST00000463916 PPFIA2O75334 1257 aa12.79□□□□□ -0.36
XRN1-203ENST00000463916 DXOO77932 396 aaKnown RBP12.79□□□□□ -0.36
XRN1-203ENST00000463916 PRAMEF1O95521 474 aa12.79□□□□□ -0.36
XRN1-203ENST00000463916 GPR89BP0CG08 455 aa12.79□□□□□ -0.36
XRN1-203ENST00000463916 HGFP14210 728 aa12.79□□□□□ -0.36
XRN1-203ENST00000463916 HOXB3P14651 431 aaPredicted RBP12.79□□□□□ -0.36
XRN1-203ENST00000463916 ZNF7P17097 686 aaPredicted RBP12.79□□□□□ -0.36
XRN1-203ENST00000463916 CXCR5P32302 372 aa12.79□□□□□ -0.36
XRN1-203ENST00000463916 EIF2S3P41091 472 aaKnown RBP12.79□□□□□ -0.36
XRN1-203ENST00000463916 FASLGP48023 281 aa12.79□□□□□ -0.36
XRN1-203ENST00000463916 CTSCP53634 463 aa12.79□□□□□ -0.36
XRN1-203ENST00000463916 INHBCP55103 352 aa12.79□□□□□ -0.36
XRN1-203ENST00000463916 TMPRSS15P98073 1019 aa12.79□□□□□ -0.36
XRN1-203ENST00000463916 XIAPP98170 497 aa12.79□□□□□ -0.36
XRN1-203ENST00000463916 PEX6Q13608 980 aa12.79□□□□□ -0.36
XRN1-203ENST00000463916 GPRC6AQ5T6X5 926 aa12.79□□□□□ -0.36
XRN1-203ENST00000463916 ZDHHC20Q5W0Z9 365 aa12.79□□□□□ -0.36
XRN1-203ENST00000463916 LRRTM4Q86VH4 590 aa12.79□□□□□ -0.36
XRN1-203ENST00000463916 SLITRK4Q8IW52 837 aa12.79□□□□□ -0.36
XRN1-203ENST00000463916 ZNF398Q8TD17 642 aa12.79□□□□□ -0.36
XRN1-203ENST00000463916 UBE2Q2Q8WVN8 375 aa12.79□□□□□ -0.36
XRN1-203ENST00000463916 CCDC97Q96F63 343 aaPredicted RBP12.79□□□□□ -0.36
XRN1-203ENST00000463916 ALS2CR12Q96Q35 445 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms