RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 CROCCP2Q86T23 111 aa14.2□□□□□ -0.14
COL6A1-202ENST00000463060 HEATR4Q86WZ0 1026 aa14.2□□□□□ -0.14
COL6A1-202ENST00000463060 RBFAQ8N0V3 343 aa14.2□□□□□ -0.14
COL6A1-202ENST00000463060 C1orf216Q8TAB5 229 aa14.2□□□□□ -0.14
COL6A1-202ENST00000463060 DNASE2BQ8WZ79 361 aa14.2□□□□□ -0.14
COL6A1-202ENST00000463060 ISL2Q96A47 359 aa14.2□□□□□ -0.14
COL6A1-202ENST00000463060 PGM2Q96G03 612 aa14.2□□□□□ -0.14
COL6A1-202ENST00000463060 HIC2Q96JB3 615 aa14.2□□□□□ -0.14
COL6A1-202ENST00000463060 VPS39Q96JC1 886 aa14.2□□□□□ -0.14
COL6A1-202ENST00000463060 SPACA7Q96KW9 195 aa14.2□□□□□ -0.14
COL6A1-202ENST00000463060 TTC1Q99614 292 aa14.2□□□□□ -0.14
COL6A1-202ENST00000463060 APOOQ9BUR5 198 aa14.2□□□□□ -0.14
COL6A1-202ENST00000463060 LGR4Q9BXB1 951 aa14.2□□□□□ -0.14
COL6A1-202ENST00000463060 TRIM39Q9HCM9 518 aa14.2□□□□□ -0.14
COL6A1-202ENST00000463060 FZD3Q9NPG1 666 aa14.2□□□□□ -0.14
COL6A1-202ENST00000463060 CORO1CQ9ULV4 474 aaPredicted RBP14.2□□□□□ -0.14
COL6A1-202ENST00000463060 VPS9D1Q9Y2B5 631 aa14.2□□□□□ -0.14
COL6A1-202ENST00000463060 PRSS21Q9Y6M0 314 aa14.2□□□□□ -0.14
COL6A1-202ENST00000463060 KMT2EQ8IZD2 1858 aa14.2□□□□□ -0.14
COL6A1-202ENST00000463060 TLDC2A0PJX2 215 aa14.19□□□□□ -0.14
COL6A1-202ENST00000463060 FAM86C2PA6NEL3 165 aa14.19□□□□□ -0.14
COL6A1-202ENST00000463060 TOR1BO14657 336 aa14.19□□□□□ -0.14
COL6A1-202ENST00000463060 PRMT5O14744 637 aaPredicted RBP14.19□□□□□ -0.14
COL6A1-202ENST00000463060 INPP4BO15327 924 aa14.19□□□□□ -0.14
COL6A1-202ENST00000463060 HRO43593 1189 aa14.19□□□□□ -0.14
COL6A1-202ENST00000463060 SLC25A14O95258 325 aaPredicted RBP14.19□□□□□ -0.14
COL6A1-202ENST00000463060 ITGA2BP08514 1039 aa14.19□□□□□ -0.14
COL6A1-202ENST00000463060 SNRPAP09012 282 aaKnown RBP14.19□□□□□ -0.14
COL6A1-202ENST00000463060 SP9P0CG40 484 aa14.19□□□□□ -0.14
COL6A1-202ENST00000463060 ZNF7P17097 686 aaPredicted RBP14.19□□□□□ -0.14
COL6A1-202ENST00000463060 CD9P21926 228 aa14.19□□□□□ -0.14
COL6A1-202ENST00000463060 CNTFP26441 200 aa14.19□□□□□ -0.14
COL6A1-202ENST00000463060 NSG1P42857 185 aa14.19□□□□□ -0.14
COL6A1-202ENST00000463060 POLD2P49005 469 aa14.19□□□□□ -0.14
COL6A1-202ENST00000463060 CLDN2P57739 230 aa14.19□□□□□ -0.14
COL6A1-202ENST00000463060 CDK3Q00526 305 aa14.19□□□□□ -0.14
COL6A1-202ENST00000463060 TMEM115Q12893 351 aaPredicted RBP14.19□□□□□ -0.14
COL6A1-202ENST00000463060 KRT71Q3SY84 523 aa14.19□□□□□ -0.14
COL6A1-202ENST00000463060 CTSL3PQ5NE16 218 aa14.19□□□□□ -0.14
COL6A1-202ENST00000463060 MACC1Q6ZN28 852 aa14.19□□□□□ -0.14
COL6A1-202ENST00000463060 PHYKPLQ8IUZ5 450 aa14.19□□□□□ -0.14
COL6A1-202ENST00000463060 CNPY4Q8N129 248 aa14.19□□□□□ -0.14
COL6A1-202ENST00000463060 CLDN19Q8N6F1 224 aa14.19□□□□□ -0.14
COL6A1-202ENST00000463060 OTUD6BQ8N6M0 293 aa14.19□□□□□ -0.14
COL6A1-202ENST00000463060 RASGEF1AQ8N9B8 481 aa14.19□□□□□ -0.14
COL6A1-202ENST00000463060 ZBTB44Q8NCP5 570 aa14.19□□□□□ -0.14
COL6A1-202ENST00000463060 HEXDCQ8WVB3 486 aa14.19□□□□□ -0.14
COL6A1-202ENST00000463060 GAB3Q8WWW8 586 aa14.19□□□□□ -0.14
COL6A1-202ENST00000463060 AARSD1Q9BTE6 412 aaKnown RBP14.19□□□□□ -0.14
COL6A1-202ENST00000463060 TMBIM4Q9HC24 238 aa14.19□□□□□ -0.14
COL6A1-202ENST00000463060 GPR27Q9NS67 375 aa14.19□□□□□ -0.14
COL6A1-202ENST00000463060 TXNDC16Q9P2K2 825 aa14.19□□□□□ -0.14
COL6A1-202ENST00000463060 CRYL1Q9Y2S2 319 aa14.19□□□□□ -0.14
COL6A1-202ENST00000463060 IKBKGQ9Y6K9 419 aa14.19□□□□□ -0.14
COL6A1-202ENST00000463060 SLCO1B1Q9Y6L6 691 aa14.19□□□□□ -0.14
COL6A1-202ENST00000463060 CEP192Q8TEP8 1941 aa14.18□□□□□ -0.14
COL6A1-202ENST00000463060 PRR33A8MZF0 331 aa14.18□□□□□ -0.14
COL6A1-202ENST00000463060 FPGTO14772 594 aa14.18□□□□□ -0.14
COL6A1-202ENST00000463060 PFDN6O15212 129 aa14.18□□□□□ -0.14
COL6A1-202ENST00000463060 RFPL1O75677 317 aa14.18□□□□□ -0.14
COL6A1-202ENST00000463060 KRT38O76015 456 aa14.18□□□□□ -0.14
COL6A1-202ENST00000463060 SYF2O95926 243 aaKnown RBP14.18□□□□□ -0.14
COL6A1-202ENST00000463060 ESR1P03372 595 aa14.18□□□□□ -0.14
COL6A1-202ENST00000463060 FUCA1P04066 466 aa14.18□□□□□ -0.14
COL6A1-202ENST00000463060 ATP1B2P14415 290 aaPredicted RBP14.18□□□□□ -0.14
COL6A1-202ENST00000463060 PKMP14618 531 aaKnown RBP14.18□□□□□ -0.14
COL6A1-202ENST00000463060 CD27P26842 260 aa14.18□□□□□ -0.14
COL6A1-202ENST00000463060 FMO4P31512 558 aa14.18□□□□□ -0.14
COL6A1-202ENST00000463060 AKT2P31751 481 aa14.18□□□□□ -0.14
COL6A1-202ENST00000463060 MAGEA12P43365 314 aa14.18□□□□□ -0.14
COL6A1-202ENST00000463060 NUBP1P53384 320 aa14.18□□□□□ -0.14
COL6A1-202ENST00000463060 KIAA1024LP59773 190 aa14.18□□□□□ -0.14
COL6A1-202ENST00000463060 RPL6Q02878 288 aaKnown RBP14.18□□□□□ -0.14
COL6A1-202ENST00000463060 DNAJC3Q13217 504 aa14.18□□□□□ -0.14
COL6A1-202ENST00000463060 RBM20Q5T481 1227 aaKnown RBP14.18□□□□□ -0.14
COL6A1-202ENST00000463060 ZNF648Q5T619 568 aaPredicted RBP14.18□□□□□ -0.14
COL6A1-202ENST00000463060 LGSNQ5TDP6 509 aa14.18□□□□□ -0.14
COL6A1-202ENST00000463060 TRIM74Q86UV6 250 aa14.18□□□□□ -0.14
COL6A1-202ENST00000463060 DCLK2Q8N568 766 aa14.18□□□□□ -0.14
COL6A1-202ENST00000463060 DEFB119Q8N690 84 aa14.18□□□□□ -0.14
COL6A1-202ENST00000463060 FOXJ1Q92949 421 aa14.18□□□□□ -0.14
COL6A1-202ENST00000463060 ZBTB9Q96C00 473 aa14.18□□□□□ -0.14
COL6A1-202ENST00000463060 MTBPQ96DY7 904 aa14.18□□□□□ -0.14
COL6A1-202ENST00000463060 SCARF2Q96GP6 870 aaPredicted RBP14.18□□□□□ -0.14
COL6A1-202ENST00000463060 PKNOX2Q96KN3 472 aa14.18□□□□□ -0.14
COL6A1-202ENST00000463060 LATS2Q9NRM7 1088 aa14.18□□□□□ -0.14
COL6A1-202ENST00000463060 TBK1Q9UHD2 729 aa14.18□□□□□ -0.14
COL6A1-202ENST00000463060 CA5BQ9Y2D0 317 aa14.18□□□□□ -0.14
COL6A1-202ENST00000463060 OR1A2Q9Y585 309 aa14.18□□□□□ -0.14
COL6A1-202ENST00000463060 PCDHB1Q9Y5F3 818 aa14.18□□□□□ -0.14
COL6A1-202ENST00000463060 COMMD10Q9Y6G5 202 aa14.18□□□□□ -0.14
COL6A1-202ENST00000463060 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.17□□□□□ -0.14
COL6A1-202ENST00000463060 A0A1W2PR77 199 aa14.17□□□□□ -0.14
COL6A1-202ENST00000463060 SMIM23A6NLE4 172 aa14.17□□□□□ -0.14
COL6A1-202ENST00000463060 FOXO6A8MYZ6 492 aa14.17□□□□□ -0.14
COL6A1-202ENST00000463060 TRIM49D1C9J1S8 452 aa14.17□□□□□ -0.14
COL6A1-202ENST00000463060 H0Y8X5 98 aa14.17□□□□□ -0.14
COL6A1-202ENST00000463060 CHUKO15111 745 aa14.17□□□□□ -0.14
COL6A1-202ENST00000463060 MAP3K13O43283 966 aa14.17□□□□□ -0.14
COL6A1-202ENST00000463060 VEGFDO43915 354 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms