RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 KMOO15229 486 aa15.19■□□□□ 0.02
SKA3-204ENST00000462482 NKX2-8O15522 239 aa15.19■□□□□ 0.02
SKA3-204ENST00000462482 ZNF8P17098 575 aaPredicted RBP15.19■□□□□ 0.02
SKA3-204ENST00000462482 VCLP18206 1134 aa15.19■□□□□ 0.02
SKA3-204ENST00000462482 TCN2P20062 427 aa15.19■□□□□ 0.02
SKA3-204ENST00000462482 KDELR1P24390 212 aa15.19■□□□□ 0.02
SKA3-204ENST00000462482 TAS2R40P59535 323 aa15.19■□□□□ 0.02
SKA3-204ENST00000462482 TLE1Q04724 770 aa15.19■□□□□ 0.02
SKA3-204ENST00000462482 CDC20Q12834 499 aa15.19■□□□□ 0.02
SKA3-204ENST00000462482 IHHQ14623 411 aa15.19■□□□□ 0.02
SKA3-204ENST00000462482 CRTC3Q6UUV7 619 aa15.19■□□□□ 0.02
SKA3-204ENST00000462482 NT5DC3Q86UY8 548 aa15.19■□□□□ 0.02
SKA3-204ENST00000462482 LRRTM4Q86VH4 590 aa15.19■□□□□ 0.02
SKA3-204ENST00000462482 TRAM1L1Q8N609 369 aa15.19■□□□□ 0.02
SKA3-204ENST00000462482 C9orf43Q8TAL5 461 aaPredicted RBP15.19■□□□□ 0.02
SKA3-204ENST00000462482 APOBEC4Q8WW27 367 aaKnown RBP15.19■□□□□ 0.02
SKA3-204ENST00000462482 PLEKHG4BQ96PX9 1271 aa15.19■□□□□ 0.02
SKA3-204ENST00000462482 UCK1Q9HA47 277 aa15.19■□□□□ 0.02
SKA3-204ENST00000462482 MAGEE1Q9HCI5 957 aa15.19■□□□□ 0.02
SKA3-204ENST00000462482 ARFGAP3Q9NP61 516 aa15.19■□□□□ 0.02
SKA3-204ENST00000462482 ZNHIT6Q9NWK9 470 aaKnown RBP15.19■□□□□ 0.02
SKA3-204ENST00000462482 SHOC2Q9UQ13 582 aa15.19■□□□□ 0.02
SKA3-204ENST00000462482 TMEM184BQ9Y519 407 aaPredicted RBP15.19■□□□□ 0.02
SKA3-204ENST00000462482 PCDHB3Q9Y5E6 796 aa15.19■□□□□ 0.02
SKA3-204ENST00000462482 PCYT1BQ9Y5K3 369 aaPredicted RBP15.19■□□□□ 0.02
SKA3-204ENST00000462482 VEGFDO43915 354 aa15.18■□□□□ 0.02
SKA3-204ENST00000462482 RASSF9O75901 435 aa15.18■□□□□ 0.02
SKA3-204ENST00000462482 UBXN7O94888 489 aa15.18■□□□□ 0.02
SKA3-204ENST00000462482 MMP2P08253 660 aa15.18■□□□□ 0.02
SKA3-204ENST00000462482 ANKRD34CP0C6C1 535 aa15.18■□□□□ 0.02
SKA3-204ENST00000462482 XRCC1P18887 633 aaPredicted RBP15.18■□□□□ 0.02
SKA3-204ENST00000462482 CASP14P31944 242 aa15.18■□□□□ 0.02
SKA3-204ENST00000462482 DCDC1P59894 354 aa15.18■□□□□ 0.02
SKA3-204ENST00000462482 CDK18Q07002 472 aa15.18■□□□□ 0.02
SKA3-204ENST00000462482 SLC10A2Q12908 348 aaPredicted RBP15.18■□□□□ 0.02
SKA3-204ENST00000462482 GTF2H3Q13889 308 aa15.18■□□□□ 0.02
SKA3-204ENST00000462482 MAP7Q14244 749 aa15.18■□□□□ 0.02
SKA3-204ENST00000462482 MESDQ14696 234 aa15.18■□□□□ 0.02
SKA3-204ENST00000462482 PCSK7Q16549 785 aa15.18■□□□□ 0.02
SKA3-204ENST00000462482 C16orf46Q6P387 395 aa15.18■□□□□ 0.02
SKA3-204ENST00000462482 CYB5D1Q6P9G0 228 aa15.18■□□□□ 0.02
SKA3-204ENST00000462482 TMEM26Q6ZUK4 368 aa15.18■□□□□ 0.02
SKA3-204ENST00000462482 RBM12BQ8IXT5 1001 aaKnown RBP15.18■□□□□ 0.02
SKA3-204ENST00000462482 UNC5BQ8IZJ1 945 aa15.18■□□□□ 0.02
SKA3-204ENST00000462482 STARD8Q92502 1023 aa15.18■□□□□ 0.02
SKA3-204ENST00000462482 RAPGEF5Q92565 580 aa15.18■□□□□ 0.02
SKA3-204ENST00000462482 GLYATL1Q969I3 302 aa15.18■□□□□ 0.02
SKA3-204ENST00000462482 CXorf40BQ96DE9 158 aa15.18■□□□□ 0.02
SKA3-204ENST00000462482 TTC25Q96NG3 672 aa15.18■□□□□ 0.02
SKA3-204ENST00000462482 AGAP3Q96P47 875 aa15.18■□□□□ 0.02
SKA3-204ENST00000462482 ULBP3Q9BZM4 244 aa15.18■□□□□ 0.02
SKA3-204ENST00000462482 BRD8Q9H0E9 1235 aa15.18■□□□□ 0.02
SKA3-204ENST00000462482 ANAPC2Q9UJX6 822 aa15.18■□□□□ 0.02
SKA3-204ENST00000462482 DNAJC16Q9Y2G8 782 aa15.18■□□□□ 0.02
SKA3-204ENST00000462482 ZNF711Q9Y462 761 aa15.18■□□□□ 0.02
SKA3-204ENST00000462482 MN1Q10571 1320 aaPredicted RBP15.17■□□□□ 0.02
SKA3-204ENST00000462482 UNC13CQ8NB66 2214 aa15.17■□□□□ 0.02
SKA3-204ENST00000462482 LOC101059948A0A1B0GTJ6 334 aa15.17■□□□□ 0.02
SKA3-204ENST00000462482 SYCE3A1L190 88 aa15.17■□□□□ 0.02
SKA3-204ENST00000462482 ZNF487B1APH4 448 aa15.17■□□□□ 0.02
SKA3-204ENST00000462482 TOX3O15405 576 aaPredicted RBP15.17■□□□□ 0.02
SKA3-204ENST00000462482 AKR1B10O60218 316 aa15.17■□□□□ 0.02
SKA3-204ENST00000462482 CDK14O94921 469 aa15.17■□□□□ 0.02
SKA3-204ENST00000462482 GYPCP04921 128 aa15.17■□□□□ 0.02
SKA3-204ENST00000462482 TPM1P09493 284 aa15.17■□□□□ 0.02
SKA3-204ENST00000462482 TMEM253P0C7T8 217 aa15.17■□□□□ 0.02
SKA3-204ENST00000462482 PIRTP0C851 137 aa15.17■□□□□ 0.02
SKA3-204ENST00000462482 ZNF7P17097 686 aaPredicted RBP15.17■□□□□ 0.02
SKA3-204ENST00000462482 TYRP1P17643 537 aa15.17■□□□□ 0.02
SKA3-204ENST00000462482 IDSP22304 550 aa15.17■□□□□ 0.02
SKA3-204ENST00000462482 HALP42357 657 aa15.17■□□□□ 0.02
SKA3-204ENST00000462482 UBE2IP63279 158 aaKnown RBP15.17■□□□□ 0.02
SKA3-204ENST00000462482 ZBTB17Q13105 803 aa15.17■□□□□ 0.02
SKA3-204ENST00000462482 SLC18A3Q16572 532 aa15.17■□□□□ 0.02
SKA3-204ENST00000462482 DEFB109BQ30KR1 87 aa15.17■□□□□ 0.02
SKA3-204ENST00000462482 PLA2G4EQ3MJ16 856 aa15.17■□□□□ 0.02
SKA3-204ENST00000462482 C6orf15Q6UXA7 325 aaPredicted RBP15.17■□□□□ 0.02
SKA3-204ENST00000462482 BZW1Q7L1Q6 419 aaKnown RBP15.17■□□□□ 0.02
SKA3-204ENST00000462482 ADGRG6Q86SQ4 1221 aa15.17■□□□□ 0.02
SKA3-204ENST00000462482 CPNE8Q86YQ8 564 aa15.17■□□□□ 0.02
SKA3-204ENST00000462482 CNTD1Q8N815 330 aa15.17■□□□□ 0.02
SKA3-204ENST00000462482 GPR26Q8NDV2 337 aa15.17■□□□□ 0.02
SKA3-204ENST00000462482 GDAP1Q8TB36 358 aa15.17■□□□□ 0.02
SKA3-204ENST00000462482 IMP4Q96G21 291 aaKnown RBP15.17■□□□□ 0.02
SKA3-204ENST00000462482 ZDHHC12Q96GR4 267 aa15.17■□□□□ 0.02
SKA3-204ENST00000462482 C9orf72Q96LT7 481 aa15.17■□□□□ 0.02
SKA3-204ENST00000462482 TGM7Q96PF1 710 aa15.17■□□□□ 0.02
SKA3-204ENST00000462482 TIMM29Q9BSF4 260 aa15.17■□□□□ 0.02
SKA3-204ENST00000462482 SPRY4Q9C004 299 aa15.17■□□□□ 0.02
SKA3-204ENST00000462482 XPO4Q9C0E2 1151 aaKnown RBP15.17■□□□□ 0.02
SKA3-204ENST00000462482 SLC25A51Q9H1U9 297 aa15.17■□□□□ 0.02
SKA3-204ENST00000462482 APMAPQ9HDC9 416 aa15.17■□□□□ 0.02
SKA3-204ENST00000462482 POT1Q9NUX5 634 aa15.17■□□□□ 0.02
SKA3-204ENST00000462482 IFNKQ9P0W0 207 aa15.17■□□□□ 0.02
SKA3-204ENST00000462482 NFKBIL1Q9UBC1 381 aaPredicted RBP15.17■□□□□ 0.02
SKA3-204ENST00000462482 RPS6KL1Q9Y6S9 549 aa15.17■□□□□ 0.02
SKA3-204ENST00000462482 KRT1P04264 644 aa15.16■□□□□ 0.02
SKA3-204ENST00000462482 STAT5AP42229 794 aa15.16■□□□□ 0.02
SKA3-204ENST00000462482 ARHGAP25P42331 645 aa15.16■□□□□ 0.02
SKA3-204ENST00000462482 SLC14A2Q15849 920 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms