RNA–Protein interactions for RNA: ENST00000462475.1

COL7A1-204, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 305 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-204ENST00000462475 CASP14P31944 242 aa15.89■□□□□ 0.13
COL7A1-204ENST00000462475 MAN1A1P33908 653 aa15.89■□□□□ 0.13
COL7A1-204ENST00000462475 CCR10P46092 362 aa15.89■□□□□ 0.13
COL7A1-204ENST00000462475 TLE1Q04724 770 aa15.89■□□□□ 0.13
COL7A1-204ENST00000462475 H2AFVQ71UI9 128 aa15.89■□□□□ 0.13
COL7A1-204ENST00000462475 KDELC2Q7Z4H8 507 aa15.89■□□□□ 0.13
COL7A1-204ENST00000462475 CTNNBL1Q8WYA6 563 aaPredicted RBP15.89■□□□□ 0.13
COL7A1-204ENST00000462475 KIAA1143Q96AT1 154 aaPredicted RBP15.89■□□□□ 0.13
COL7A1-204ENST00000462475 RNF31Q96EP0 1072 aa15.89■□□□□ 0.13
COL7A1-204ENST00000462475 ZFYVE1Q9HBF4 777 aa15.89■□□□□ 0.13
COL7A1-204ENST00000462475 OGFRQ9NZT2 677 aa15.89■□□□□ 0.13
COL7A1-204ENST00000462475 IFNKQ9P0W0 207 aa15.89■□□□□ 0.13
COL7A1-204ENST00000462475 SLC23A2Q9UGH3 650 aa15.89■□□□□ 0.13
COL7A1-204ENST00000462475 TMEM184BQ9Y519 407 aaPredicted RBP15.89■□□□□ 0.13
COL7A1-204ENST00000462475 HEY1Q9Y5J3 304 aa15.89■□□□□ 0.13
COL7A1-204ENST00000462475 PTPN13Q12923 2485 aa15.88■□□□□ 0.13
COL7A1-204ENST00000462475 LRRD1A4D1F6 860 aa15.88■□□□□ 0.13
COL7A1-204ENST00000462475 OR5K4A6NMS3 321 aa15.88■□□□□ 0.13
COL7A1-204ENST00000462475 CAPN5O15484 640 aaPredicted RBP15.88■□□□□ 0.13
COL7A1-204ENST00000462475 SLC25A14O95258 325 aaPredicted RBP15.88■□□□□ 0.13
COL7A1-204ENST00000462475 DLGAP3O95886 979 aa15.88■□□□□ 0.13
COL7A1-204ENST00000462475 OAS2P29728 719 aaKnown RBP15.88■□□□□ 0.13
COL7A1-204ENST00000462475 CLCNKAP51800 687 aa15.88■□□□□ 0.13
COL7A1-204ENST00000462475 DCDC1P59894 354 aa15.88■□□□□ 0.13
COL7A1-204ENST00000462475 CDC20Q12834 499 aa15.88■□□□□ 0.13
COL7A1-204ENST00000462475 NPNTQ6UXI9 565 aa15.88■□□□□ 0.13
COL7A1-204ENST00000462475 ADGRG6Q86SQ4 1221 aa15.88■□□□□ 0.13
COL7A1-204ENST00000462475 TRAM1L1Q8N609 369 aa15.88■□□□□ 0.13
COL7A1-204ENST00000462475 IMP4Q96G21 291 aaKnown RBP15.88■□□□□ 0.13
COL7A1-204ENST00000462475 AGAP3Q96P47 875 aa15.88■□□□□ 0.13
COL7A1-204ENST00000462475 CATSPER2Q96P56 530 aa15.88■□□□□ 0.13
COL7A1-204ENST00000462475 ZPBPQ9BS86 351 aa15.88■□□□□ 0.13
COL7A1-204ENST00000462475 EPB41L1Q9H4G0 881 aa15.88■□□□□ 0.13
COL7A1-204ENST00000462475 TRIM39Q9HCM9 518 aa15.88■□□□□ 0.13
COL7A1-204ENST00000462475 NFKBIL1Q9UBC1 381 aaPredicted RBP15.88■□□□□ 0.13
COL7A1-204ENST00000462475 TUBD1Q9UJT1 453 aa15.88■□□□□ 0.13
COL7A1-204ENST00000462475 ZNF711Q9Y462 761 aa15.88■□□□□ 0.13
COL7A1-204ENST00000462475 FLNCQ14315 2725 aa15.87■□□□□ 0.13
COL7A1-204ENST00000462475 C3orf70A6NLC5 250 aaPredicted RBP15.87■□□□□ 0.13
COL7A1-204ENST00000462475 CHUKO15111 745 aa15.87■□□□□ 0.13
COL7A1-204ENST00000462475 POLR1CO15160 346 aaPredicted RBP15.87■□□□□ 0.13
COL7A1-204ENST00000462475 MTX2O75431 263 aa15.87■□□□□ 0.13
COL7A1-204ENST00000462475 MTA2O94776 668 aa15.87■□□□□ 0.13
COL7A1-204ENST00000462475 ANKRD34CP0C6C1 535 aa15.87■□□□□ 0.13
COL7A1-204ENST00000462475 TYRP1P17643 537 aa15.87■□□□□ 0.13
COL7A1-204ENST00000462475 HNRNPH3P31942 346 aaKnown RBP15.87■□□□□ 0.13
COL7A1-204ENST00000462475 SLC19A1P41440 591 aa15.87■□□□□ 0.13
COL7A1-204ENST00000462475 ABHD18Q0P651 414 aa15.87■□□□□ 0.13
COL7A1-204ENST00000462475 AP1B1Q10567 949 aa15.87■□□□□ 0.13
COL7A1-204ENST00000462475 MESDQ14696 234 aa15.87■□□□□ 0.13
COL7A1-204ENST00000462475 SEPT7Q16181 437 aaKnown RBP15.87■□□□□ 0.13
COL7A1-204ENST00000462475 PCSK7Q16549 785 aa15.87■□□□□ 0.13
COL7A1-204ENST00000462475 SLC18A3Q16572 532 aa15.87■□□□□ 0.13
COL7A1-204ENST00000462475 INSCQ1MX18 579 aa15.87■□□□□ 0.13
COL7A1-204ENST00000462475 SKIDA1Q1XH10 827 aa15.87■□□□□ 0.13
COL7A1-204ENST00000462475 KHDC1Q4VXA5 237 aaKnown RBP15.87■□□□□ 0.13
COL7A1-204ENST00000462475 ATP1A1-AS1Q5TC04 95 aa15.87■□□□□ 0.13
COL7A1-204ENST00000462475 SLC9A4Q6AI14 798 aa15.87■□□□□ 0.13
COL7A1-204ENST00000462475 B4GALNT4Q76KP1 1039 aa15.87■□□□□ 0.13
COL7A1-204ENST00000462475 TMC3Q7Z5M5 1100 aa15.87■□□□□ 0.13
COL7A1-204ENST00000462475 PLXDC1Q8IUK5 500 aa15.87■□□□□ 0.13
COL7A1-204ENST00000462475 AVL9Q8NBF6 648 aa15.87■□□□□ 0.13
COL7A1-204ENST00000462475 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.87■□□□□ 0.13
COL7A1-204ENST00000462475 STARD8Q92502 1023 aa15.87■□□□□ 0.13
COL7A1-204ENST00000462475 GLYATL1Q969I3 302 aa15.87■□□□□ 0.13
COL7A1-204ENST00000462475 OLFM3Q96PB7 478 aa15.87■□□□□ 0.13
COL7A1-204ENST00000462475 ZSCAN5AQ9BUG6 496 aa15.87■□□□□ 0.13
COL7A1-204ENST00000462475 EPN3Q9H201 632 aa15.87■□□□□ 0.13
COL7A1-204ENST00000462475 UCK1Q9HA47 277 aa15.87■□□□□ 0.13
COL7A1-204ENST00000462475 ZNF624Q9P2J8 865 aaPredicted RBP15.87■□□□□ 0.13
COL7A1-204ENST00000462475 DNAJC16Q9Y2G8 782 aa15.87■□□□□ 0.13
COL7A1-204ENST00000462475 SLC30A1Q9Y6M5 507 aa15.87■□□□□ 0.13
COL7A1-204ENST00000462475 PRR19A6NJB7 356 aa15.86■□□□□ 0.13
COL7A1-204ENST00000462475 PDZK1P1A8MUH7 402 aa15.86■□□□□ 0.13
COL7A1-204ENST00000462475 GPR89AB7ZAQ6 455 aa15.86■□□□□ 0.13
COL7A1-204ENST00000462475 C9P02748 559 aa15.86■□□□□ 0.13
COL7A1-204ENST00000462475 GPR89BP0CG08 455 aa15.86■□□□□ 0.13
COL7A1-204ENST00000462475 ZNF28P17035 718 aa15.86■□□□□ 0.13
COL7A1-204ENST00000462475 BPIP17213 487 aa15.86■□□□□ 0.13
COL7A1-204ENST00000462475 XRCC1P18887 633 aaPredicted RBP15.86■□□□□ 0.13
COL7A1-204ENST00000462475 STAT5AP42229 794 aa15.86■□□□□ 0.13
COL7A1-204ENST00000462475 ASTE1Q2TB18 679 aaPredicted RBP15.86■□□□□ 0.13
COL7A1-204ENST00000462475 TMEM26Q6ZUK4 368 aa15.86■□□□□ 0.13
COL7A1-204ENST00000462475 NT5DC3Q86UY8 548 aa15.86■□□□□ 0.13
COL7A1-204ENST00000462475 ZNF547Q8IVP9 402 aa15.86■□□□□ 0.13
COL7A1-204ENST00000462475 TRIM48Q8IWZ4 208 aa15.86■□□□□ 0.13
COL7A1-204ENST00000462475 SPATA22Q8NHS9 363 aa15.86■□□□□ 0.13
COL7A1-204ENST00000462475 TADA1Q96BN2 335 aa15.86■□□□□ 0.13
COL7A1-204ENST00000462475 C9orf72Q96LT7 481 aa15.86■□□□□ 0.13
COL7A1-204ENST00000462475 TGM7Q96PF1 710 aa15.86■□□□□ 0.13
COL7A1-204ENST00000462475 EFHD1Q9BUP0 239 aa15.86■□□□□ 0.13
COL7A1-204ENST00000462475 GPR63Q9BZJ6 419 aa15.86■□□□□ 0.13
COL7A1-204ENST00000462475 SLC25A51Q9H1U9 297 aa15.86■□□□□ 0.13
COL7A1-204ENST00000462475 MAGEE1Q9HCI5 957 aa15.86■□□□□ 0.13
COL7A1-204ENST00000462475 LCMT1Q9UIC8 334 aa15.86■□□□□ 0.13
COL7A1-204ENST00000462475 TMPRSS11EQ9UL52 423 aa15.86■□□□□ 0.13
COL7A1-204ENST00000462475 SPO11Q9Y5K1 396 aa15.86■□□□□ 0.13
COL7A1-204ENST00000462475 MRPS18BQ9Y676 258 aaKnown RBP15.86■□□□□ 0.13
COL7A1-204ENST00000462475 ZNF487B1APH4 448 aa15.85■□□□□ 0.13
COL7A1-204ENST00000462475 GOLGA6L19H0YKK7 550 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms