RNA–Protein interactions for RNA: ENST00000461377.5

CCM2-203, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-203ENST00000461377 TWIST2Q8WVJ9 160 aa20.04■□□□□ 0.8
CCM2-203ENST00000461377 POF1BQ8WVV4 589 aa20.04■□□□□ 0.8
CCM2-203ENST00000461377 CCDC124Q96CT7 223 aaKnown RBP20.04■□□□□ 0.8
CCM2-203ENST00000461377 ECHDC3Q96DC8 303 aa20.04■□□□□ 0.8
CCM2-203ENST00000461377 CCDC97Q96F63 343 aaPredicted RBP20.04■□□□□ 0.8
CCM2-203ENST00000461377 RSRC1Q96IZ7 334 aaKnown RBP20.04■□□□□ 0.8
CCM2-203ENST00000461377 ASB8Q9H765 288 aa20.04■□□□□ 0.8
CCM2-203ENST00000461377 SARS2Q9NP81 518 aaKnown RBP20.04■□□□□ 0.8
CCM2-203ENST00000461377 NMRK1Q9NWW6 199 aa20.04■□□□□ 0.8
CCM2-203ENST00000461377 ERFP50548 548 aa20.03■□□□□ 0.8
CCM2-203ENST00000461377 FASTKQ14296 549 aaKnown RBP20.03■□□□□ 0.8
CCM2-203ENST00000461377 EML3Q32P44 896 aa20.03■□□□□ 0.8
CCM2-203ENST00000461377 ARHGAP15Q53QZ3 475 aa20.03■□□□□ 0.8
CCM2-203ENST00000461377 LYPLAL1Q5VWZ2 237 aa20.03■□□□□ 0.8
CCM2-203ENST00000461377 BNC2Q6ZN30 1099 aaPredicted RBP20.03■□□□□ 0.8
CCM2-203ENST00000461377 RBFAQ8N0V3 343 aa20.03■□□□□ 0.8
CCM2-203ENST00000461377 SERPINI1Q99574 410 aa20.03■□□□□ 0.8
CCM2-203ENST00000461377 TTC1Q99614 292 aa20.03■□□□□ 0.8
CCM2-203ENST00000461377 CLPBQ9H078 707 aa20.03■□□□□ 0.8
CCM2-203ENST00000461377 S100A14Q9HCY8 104 aa20.03■□□□□ 0.8
CCM2-203ENST00000461377 TLR9Q9NR96 1032 aa20.03■□□□□ 0.8
CCM2-203ENST00000461377 HECAQ9UBI9 543 aaPredicted RBP20.03■□□□□ 0.8
CCM2-203ENST00000461377 PCTPQ9UKL6 214 aa20.03■□□□□ 0.8
CCM2-203ENST00000461377 PPIL1Q9Y3C6 166 aa20.03■□□□□ 0.8
CCM2-203ENST00000461377 GLYATL1P3A0A0U1RQE8 302 aa20.03■□□□□ 0.8
CCM2-203ENST00000461377 NPIPB15A6NHN6 443 aaPredicted RBP20.03■□□□□ 0.8
CCM2-203ENST00000461377 PSMD12O00232 456 aaPredicted RBP20.03■□□□□ 0.8
CCM2-203ENST00000461377 NVLO15381 856 aaKnown RBP20.03■□□□□ 0.8
CCM2-203ENST00000461377 RHOP08100 348 aa20.03■□□□□ 0.8
CCM2-203ENST00000461377 SPAM1P38567 509 aa20.03■□□□□ 0.8
CCM2-203ENST00000461377 TCHHL1Q5QJ38 904 aaPredicted RBP20.03■□□□□ 0.8
CCM2-203ENST00000461377 PTRHD1Q6GMV3 140 aaKnown RBP20.03■□□□□ 0.8
CCM2-203ENST00000461377 GRAMD4Q6IC98 578 aa20.03■□□□□ 0.8
CCM2-203ENST00000461377 BOCQ9BWV1 1114 aa20.03■□□□□ 0.8
CCM2-203ENST00000461377 CEP44Q9C0F1 390 aa20.03■□□□□ 0.8
CCM2-203ENST00000461377 AKTIPQ9H8T0 292 aa20.03■□□□□ 0.8
CCM2-203ENST00000461377 TDP1Q9NUW8 608 aa20.03■□□□□ 0.8
CCM2-203ENST00000461377 GNPTGQ9UJJ9 305 aa20.03■□□□□ 0.8
CCM2-203ENST00000461377 SLC25A13Q9UJS0 675 aa20.03■□□□□ 0.8
CCM2-203ENST00000461377 PPM1HQ9ULR3 514 aa20.03■□□□□ 0.8
CCM2-203ENST00000461377 SCN8AQ9UQD0 1980 aa20.03■□□□□ 0.8
CCM2-203ENST00000461377 ZNF106Q9H2Y7 1883 aaKnown RBP20.02■□□□□ 0.8
CCM2-203ENST00000461377 ATP6AP2A0A1C7CYW4 349 aa20.02■□□□□ 0.8
CCM2-203ENST00000461377 NCF1BA6NI72 391 aaPredicted RBP20.02■□□□□ 0.8
CCM2-203ENST00000461377 NCF1CA8MVU1 366 aaPredicted RBP20.02■□□□□ 0.8
CCM2-203ENST00000461377 NEDD8-MDP1E9PL57 170 aa20.02■□□□□ 0.8
CCM2-203ENST00000461377 PIP5K1BO14986 540 aa20.02■□□□□ 0.8
CCM2-203ENST00000461377 ATP6AP2O75787 350 aa20.02■□□□□ 0.8
CCM2-203ENST00000461377 NCF1P14598 390 aaPredicted RBP20.02■□□□□ 0.8
CCM2-203ENST00000461377 ACRV1P26436 265 aa20.02■□□□□ 0.8
CCM2-203ENST00000461377 AGTR2P50052 363 aa20.02■□□□□ 0.8
CCM2-203ENST00000461377 ART3Q13508 389 aa20.02■□□□□ 0.8
CCM2-203ENST00000461377 SLC5A9Q2M3M2 681 aa20.02■□□□□ 0.8
CCM2-203ENST00000461377 CRTC1Q6UUV9 634 aa20.02■□□□□ 0.8
CCM2-203ENST00000461377 TSPAN33Q86UF1 283 aa20.02■□□□□ 0.8
CCM2-203ENST00000461377 PCDH20Q8N6Y1 951 aaKnown RBP20.02■□□□□ 0.8
CCM2-203ENST00000461377 KCNA7Q96RP8 456 aa20.02■□□□□ 0.8
CCM2-203ENST00000461377 NPAS2Q99743 824 aa20.02■□□□□ 0.8
CCM2-203ENST00000461377 CPEB1Q9BZB8 566 aaKnown RBP20.02■□□□□ 0.8
CCM2-203ENST00000461377 SUV39H2Q9H5I1 410 aa20.02■□□□□ 0.8
CCM2-203ENST00000461377 WDR41Q9HAD4 459 aa20.02■□□□□ 0.8
CCM2-203ENST00000461377 SEMA4BQ9NPR2 832 aaPredicted RBP20.02■□□□□ 0.8
CCM2-203ENST00000461377 UTP6Q9NYH9 597 aaKnown RBP20.02■□□□□ 0.8
CCM2-203ENST00000461377 NUDT4Q9NZJ9 180 aa20.02■□□□□ 0.8
CCM2-203ENST00000461377 A0A1B0GTL3 188 aa20.01■□□□□ 0.79
CCM2-203ENST00000461377 SOBPA7XYQ1 873 aa20.01■□□□□ 0.79
CCM2-203ENST00000461377 TLL1O43897 1013 aa20.01■□□□□ 0.79
CCM2-203ENST00000461377 PABPC1P11940 636 aaKnown RBP20.01■□□□□ 0.79
CCM2-203ENST00000461377 ENO3P13929 434 aaPredicted RBP20.01■□□□□ 0.79
CCM2-203ENST00000461377 HOXA9P31269 272 aa20.01■□□□□ 0.79
CCM2-203ENST00000461377 PTPN5P54829 565 aa20.01■□□□□ 0.79
CCM2-203ENST00000461377 CHRNA6Q15825 494 aa20.01■□□□□ 0.79
CCM2-203ENST00000461377 ZNF77Q15935 545 aa20.01■□□□□ 0.79
CCM2-203ENST00000461377 GEN1Q17RS7 908 aa20.01■□□□□ 0.79
CCM2-203ENST00000461377 GPR33Q49SQ1 333 aa20.01■□□□□ 0.79
CCM2-203ENST00000461377 AGKQ53H12 422 aa20.01■□□□□ 0.79
CCM2-203ENST00000461377 CARD16Q5EG05 197 aa20.01■□□□□ 0.79
CCM2-203ENST00000461377 FBXO48Q5FWF7 155 aa20.01■□□□□ 0.79
CCM2-203ENST00000461377 PIGGQ5H8A4 983 aa20.01■□□□□ 0.79
CCM2-203ENST00000461377 TPRG1Q6ZUI0 275 aa20.01■□□□□ 0.79
CCM2-203ENST00000461377 ADGRG6Q86SQ4 1221 aa20.01■□□□□ 0.79
CCM2-203ENST00000461377 PHYKPLQ8IUZ5 450 aa20.01■□□□□ 0.79
CCM2-203ENST00000461377 DNAJC9Q8WXX5 260 aa20.01■□□□□ 0.79
CCM2-203ENST00000461377 IRF7Q92985 503 aa20.01■□□□□ 0.79
CCM2-203ENST00000461377 SCRN2Q96FV2 425 aa20.01■□□□□ 0.79
CCM2-203ENST00000461377 NAF1Q96HR8 494 aaKnown RBP20.01■□□□□ 0.79
CCM2-203ENST00000461377 CDRT15Q96T59 188 aa20.01■□□□□ 0.79
CCM2-203ENST00000461377 BBS2Q9BXC9 721 aa20.01■□□□□ 0.79
CCM2-203ENST00000461377 TUBB1Q9H4B7 451 aa20.01■□□□□ 0.79
CCM2-203ENST00000461377 FBRSL1Q9HCM7 1045 aaKnown RBP20.01■□□□□ 0.79
CCM2-203ENST00000461377 CD274Q9NZQ7 290 aa20.01■□□□□ 0.79
CCM2-203ENST00000461377 PRSS21Q9Y6M0 314 aa20.01■□□□□ 0.79
CCM2-203ENST00000461377 SNX2O60749 519 aa20.01■□□□□ 0.79
CCM2-203ENST00000461377 ALDOCP09972 364 aaKnown RBP20.01■□□□□ 0.79
CCM2-203ENST00000461377 UGT1A6P19224 532 aa20.01■□□□□ 0.79
CCM2-203ENST00000461377 UGT1A1P22309 533 aa20.01■□□□□ 0.79
CCM2-203ENST00000461377 UGT1A4P22310 534 aa20.01■□□□□ 0.79
CCM2-203ENST00000461377 UGT1A3P35503 534 aa20.01■□□□□ 0.79
CCM2-203ENST00000461377 UGT1A5P35504 534 aa20.01■□□□□ 0.79
CCM2-203ENST00000461377 CCNHP51946 323 aaPredicted RBP20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms