RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-209ENST00000460940 TMBIM4Q9HC24 238 aa11□□□□□ -0.65
APTX-209ENST00000460940 CASS4Q9NQ75 786 aa11□□□□□ -0.65
APTX-209ENST00000460940 DGKBQ9Y6T7 804 aa11□□□□□ -0.65
APTX-209ENST00000460940 LAMA1P25391 3075 aa11□□□□□ -0.65
APTX-209ENST00000460940 CFAP54Q96N23 3096 aa11□□□□□ -0.65
APTX-209ENST00000460940 PIAS2O75928 621 aa11□□□□□ -0.65
APTX-209ENST00000460940 RASGRP1O95267 797 aa11□□□□□ -0.65
APTX-209ENST00000460940 CSRP1P21291 193 aaKnown RBP11□□□□□ -0.65
APTX-209ENST00000460940 PEX19P40855 299 aa11□□□□□ -0.65
APTX-209ENST00000460940 HADHAP40939 763 aa11□□□□□ -0.65
APTX-209ENST00000460940 CCNG1P51959 295 aa11□□□□□ -0.65
APTX-209ENST00000460940 ZNF140P52738 457 aaPredicted RBP11□□□□□ -0.65
APTX-209ENST00000460940 PUM1Q14671 1186 aaKnown RBP eCLIP11□□□□□ -0.65
APTX-209ENST00000460940 PPP1R7Q15435 360 aa11□□□□□ -0.65
APTX-209ENST00000460940 SPRED3Q2MJR0 410 aa11□□□□□ -0.65
APTX-209ENST00000460940 ALG11Q2TAA5 492 aa11□□□□□ -0.65
APTX-209ENST00000460940 TBC1D25Q3MII6 688 aa11□□□□□ -0.65
APTX-209ENST00000460940 ARMC3Q5W041 872 aa11□□□□□ -0.65
APTX-209ENST00000460940 ENPP7Q6UWV6 458 aa11□□□□□ -0.65
APTX-209ENST00000460940 PIP4P1Q86T03 277 aa11□□□□□ -0.65
APTX-209ENST00000460940 NAXDQ8IW45 347 aa11□□□□□ -0.65
APTX-209ENST00000460940 PHACTR4Q8IZ21 702 aa11□□□□□ -0.65
APTX-209ENST00000460940 KIRREL3Q8IZU9 778 aa11□□□□□ -0.65
APTX-209ENST00000460940 TEX9Q8N6V9 391 aa11□□□□□ -0.65
APTX-209ENST00000460940 OR52K1Q8NGK4 314 aa11□□□□□ -0.65
APTX-209ENST00000460940 COX14Q96I36 57 aa11□□□□□ -0.65
APTX-209ENST00000460940 FRMD8Q9BZ67 464 aaPredicted RBP11□□□□□ -0.65
APTX-209ENST00000460940 SLC13A1Q9BZW2 595 aa11□□□□□ -0.65
APTX-209ENST00000460940 SLC32A1Q9H598 525 aa11□□□□□ -0.65
APTX-209ENST00000460940 SPASTQ9UBP0 616 aa11□□□□□ -0.65
APTX-209ENST00000460940 APOBEC3BQ9UH17 382 aaKnown RBP11□□□□□ -0.65
APTX-209ENST00000460940 ARL5AQ9Y689 179 aa11□□□□□ -0.65
APTX-209ENST00000460940 ASCC3Q8N3C0 2202 aaKnown RBP10.99□□□□□ -0.65
APTX-209ENST00000460940 GLYATL1P3A0A0U1RQE8 302 aa10.99□□□□□ -0.65
APTX-209ENST00000460940 TM4SF5O14894 197 aa10.99□□□□□ -0.65
APTX-209ENST00000460940 ANP32DO95626 131 aa10.99□□□□□ -0.65
APTX-209ENST00000460940 JUNDP17535 347 aa10.99□□□□□ -0.65
APTX-209ENST00000460940 VPS41P49754 854 aa10.99□□□□□ -0.65
APTX-209ENST00000460940 HK3P52790 923 aa10.99□□□□□ -0.65
APTX-209ENST00000460940 SRP54P61011 504 aaKnown RBP10.99□□□□□ -0.65
APTX-209ENST00000460940 IL9RQ01113 521 aa10.99□□□□□ -0.65
APTX-209ENST00000460940 PTK6Q13882 451 aa10.99□□□□□ -0.65
APTX-209ENST00000460940 DHX34Q14147 1143 aaKnown RBP10.99□□□□□ -0.65
APTX-209ENST00000460940 KCNJ11Q14654 390 aa10.99□□□□□ -0.65
APTX-209ENST00000460940 TRIP13Q15645 432 aaPredicted RBP10.99□□□□□ -0.65
APTX-209ENST00000460940 PRAMEF14Q5SWL7 426 aa10.99□□□□□ -0.65
APTX-209ENST00000460940 AGBL2Q5U5Z8 902 aa10.99□□□□□ -0.65
APTX-209ENST00000460940 GKAP1Q5VSY0 366 aaPredicted RBP10.99□□□□□ -0.65
APTX-209ENST00000460940 C8orf74Q6P047 294 aa10.99□□□□□ -0.65
APTX-209ENST00000460940 KANSL1Q7Z3B3 1105 aa10.99□□□□□ -0.65
APTX-209ENST00000460940 PHYKPLQ8IUZ5 450 aa10.99□□□□□ -0.65
APTX-209ENST00000460940 SDR16C5Q8N3Y7 309 aa10.99□□□□□ -0.65
APTX-209ENST00000460940 FSTL5Q8N475 847 aaPredicted RBP10.99□□□□□ -0.65
APTX-209ENST00000460940 ZNF548Q8NEK5 533 aaPredicted RBP10.99□□□□□ -0.65
APTX-209ENST00000460940 THOC1Q96FV9 657 aaKnown RBP10.99□□□□□ -0.65
APTX-209ENST00000460940 ZNF570Q96NI8 536 aa10.99□□□□□ -0.65
APTX-209ENST00000460940 VPS35Q96QK1 796 aa10.99□□□□□ -0.65
APTX-209ENST00000460940 RANBP9Q96S59 729 aa10.99□□□□□ -0.65
APTX-209ENST00000460940 AGAP2Q99490 1192 aa10.99□□□□□ -0.65
APTX-209ENST00000460940 LGR4Q9BXB1 951 aa10.99□□□□□ -0.65
APTX-209ENST00000460940 FGF22Q9HCT0 170 aa10.99□□□□□ -0.65
APTX-209ENST00000460940 BPIFA1Q9NP55 256 aa10.99□□□□□ -0.65
APTX-209ENST00000460940 IL26Q9NPH9 171 aa10.99□□□□□ -0.65
APTX-209ENST00000460940 SMOXQ9NWM0 555 aa10.99□□□□□ -0.65
APTX-209ENST00000460940 APPL1Q9UKG1 709 aa10.99□□□□□ -0.65
APTX-209ENST00000460940 SLC12A4Q9UP95 1085 aa10.99□□□□□ -0.65
APTX-209ENST00000460940 SLC17A4Q9Y2C5 497 aa10.99□□□□□ -0.65
APTX-209ENST00000460940 CSNK1G3Q9Y6M4 447 aa10.99□□□□□ -0.65
APTX-209ENST00000460940 SCN8AQ9UQD0 1980 aa10.99□□□□□ -0.65
APTX-209ENST00000460940 DMXL1Q9Y485 3027 aa10.99□□□□□ -0.65
APTX-209ENST00000460940 CNOT1A5YKK6 2376 aaKnown RBP10.98□□□□□ -0.65
APTX-209ENST00000460940 PRSS38A1L453 326 aa10.98□□□□□ -0.65
APTX-209ENST00000460940 HEATR9A2RTY3 570 aa10.98□□□□□ -0.65
APTX-209ENST00000460940 NEMP2A6NFY4 417 aa10.98□□□□□ -0.65
APTX-209ENST00000460940 TMEM202A6NGA9 273 aa10.98□□□□□ -0.65
APTX-209ENST00000460940 GOLGA6L10A6NI86 522 aa10.98□□□□□ -0.65
APTX-209ENST00000460940 FADS2P1A8MWK0 482 aa10.98□□□□□ -0.65
APTX-209ENST00000460940 GPR89AB7ZAQ6 455 aa10.98□□□□□ -0.65
APTX-209ENST00000460940 PDLIM1O00151 329 aa10.98□□□□□ -0.65
APTX-209ENST00000460940 LDB2O43679 373 aa10.98□□□□□ -0.65
APTX-209ENST00000460940 GPR89BP0CG08 455 aa10.98□□□□□ -0.65
APTX-209ENST00000460940 DGKAP23743 735 aa10.98□□□□□ -0.65
APTX-209ENST00000460940 DR1Q01658 176 aa10.98□□□□□ -0.65
APTX-209ENST00000460940 ITGA9Q13797 1035 aa10.98□□□□□ -0.65
APTX-209ENST00000460940 SEPT6Q14141 434 aa10.98□□□□□ -0.65
APTX-209ENST00000460940 POU6F1Q14863 301 aa10.98□□□□□ -0.65
APTX-209ENST00000460940 NLRP9Q7RTR0 991 aa10.98□□□□□ -0.65
APTX-209ENST00000460940 HID1Q8IV36 788 aa10.98□□□□□ -0.65
APTX-209ENST00000460940 CCDC63Q8NA47 563 aa10.98□□□□□ -0.65
APTX-209ENST00000460940 OR4K2Q8NGD2 314 aa10.98□□□□□ -0.65
APTX-209ENST00000460940 OR1E3Q8WZA6 343 aa10.98□□□□□ -0.65
APTX-209ENST00000460940 TMEM131Q92545 1883 aa10.98□□□□□ -0.65
APTX-209ENST00000460940 PEX13Q92968 403 aa10.98□□□□□ -0.65
APTX-209ENST00000460940 GLYATL1Q969I3 302 aa10.98□□□□□ -0.65
APTX-209ENST00000460940 PDXPQ96GD0 296 aa10.98□□□□□ -0.65
APTX-209ENST00000460940 SCARF2Q96GP6 870 aaPredicted RBP10.98□□□□□ -0.65
APTX-209ENST00000460940 BAIAP2L1Q9UHR4 511 aa10.98□□□□□ -0.65
APTX-209ENST00000460940 RIMKLBQ9ULI2 386 aa10.98□□□□□ -0.65
APTX-209ENST00000460940 CNOT6Q9ULM6 557 aaKnown RBP10.98□□□□□ -0.65
APTX-209ENST00000460940 MROH6A6NGR9 719 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms