RNA–Protein interactions for RNA: ENST00000460826.1

HDLBP-229, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 442 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-229ENST00000460826 ITGALP20701 1170 aa13.85□□□□□ -0.19
HDLBP-229ENST00000460826 FOXN2P32314 431 aa13.85□□□□□ -0.19
HDLBP-229ENST00000460826 SLC7A5Q01650 507 aa13.85□□□□□ -0.19
HDLBP-229ENST00000460826 DHX9Q08211 1270 aaKnown RBP13.85□□□□□ -0.19
HDLBP-229ENST00000460826 PYCR3Q53H96 274 aa13.85□□□□□ -0.19
HDLBP-229ENST00000460826 ZRANB3Q5FWF4 1079 aa13.85□□□□□ -0.19
HDLBP-229ENST00000460826 PSAPL1Q6NUJ1 521 aa13.85□□□□□ -0.19
HDLBP-229ENST00000460826 C8orf74Q6P047 294 aa13.85□□□□□ -0.19
HDLBP-229ENST00000460826 SNX20Q7Z614 316 aa13.85□□□□□ -0.19
HDLBP-229ENST00000460826 PIP4P1Q86T03 277 aa13.85□□□□□ -0.19
HDLBP-229ENST00000460826 NAXDQ8IW45 347 aa13.85□□□□□ -0.19
HDLBP-229ENST00000460826 PIANPQ8IYJ0 282 aa13.85□□□□□ -0.19
HDLBP-229ENST00000460826 LRRN4CLQ8ND94 238 aa13.85□□□□□ -0.19
HDLBP-229ENST00000460826 MNS1Q8NEH6 495 aa13.85□□□□□ -0.19
HDLBP-229ENST00000460826 DDHD1Q8NEL9 900 aa13.85□□□□□ -0.19
HDLBP-229ENST00000460826 CCL4L1Q8NHW4 92 aa13.85□□□□□ -0.19
HDLBP-229ENST00000460826 GDAP1Q8TB36 358 aa13.85□□□□□ -0.19
HDLBP-229ENST00000460826 MFSD3Q96ES6 412 aa13.85□□□□□ -0.19
HDLBP-229ENST00000460826 MRM3Q9HC36 420 aaKnown RBP13.85□□□□□ -0.19
HDLBP-229ENST00000460826 TRIM39Q9HCM9 518 aa13.85□□□□□ -0.19
HDLBP-229ENST00000460826 SPASTQ9UBP0 616 aa13.85□□□□□ -0.19
HDLBP-229ENST00000460826 CRLS1Q9UJA2 301 aa13.85□□□□□ -0.19
HDLBP-229ENST00000460826 ANAPC5Q9UJX4 755 aa13.85□□□□□ -0.19
HDLBP-229ENST00000460826 CDV3Q9UKY7 258 aaKnown RBP13.85□□□□□ -0.19
HDLBP-229ENST00000460826 SLC30A1Q9Y6M5 507 aa13.85□□□□□ -0.19
HDLBP-229ENST00000460826 COL5A1P20908 1838 aaPredicted RBP13.85□□□□□ -0.19
HDLBP-229ENST00000460826 RP1P56715 2156 aa13.84□□□□□ -0.19
HDLBP-229ENST00000460826 TRIM38O00635 465 aa13.84□□□□□ -0.19
HDLBP-229ENST00000460826 NUAK1O60285 661 aa13.84□□□□□ -0.19
HDLBP-229ENST00000460826 CTSEP14091 401 aa13.84□□□□□ -0.19
HDLBP-229ENST00000460826 ARNTP27540 789 aa13.84□□□□□ -0.19
HDLBP-229ENST00000460826 BLKP51451 505 aa13.84□□□□□ -0.19
HDLBP-229ENST00000460826 B4GALNT1Q00973 533 aa13.84□□□□□ -0.19
HDLBP-229ENST00000460826 SEMA3AQ14563 771 aa13.84□□□□□ -0.19
HDLBP-229ENST00000460826 SUZ12Q15022 739 aaKnown RBP13.84□□□□□ -0.19
HDLBP-229ENST00000460826 SMAD1Q15797 465 aaKnown RBP13.84□□□□□ -0.19
HDLBP-229ENST00000460826 DEFB133Q30KQ1 61 aa13.84□□□□□ -0.19
HDLBP-229ENST00000460826 BBS9Q3SYG4 887 aa13.84□□□□□ -0.19
HDLBP-229ENST00000460826 LDLRAP1Q5SW96 308 aa13.84□□□□□ -0.19
HDLBP-229ENST00000460826 CASC4Q6P4E1 433 aa13.84□□□□□ -0.19
HDLBP-229ENST00000460826 SERPINA9Q86WD7 417 aa13.84□□□□□ -0.19
HDLBP-229ENST00000460826 NRROSQ86YC3 692 aa13.84□□□□□ -0.19
HDLBP-229ENST00000460826 IGDCC3Q8IVU1 814 aa13.84□□□□□ -0.19
HDLBP-229ENST00000460826 NXPE1Q8N323 547 aa13.84□□□□□ -0.19
HDLBP-229ENST00000460826 EID2Q8N6I1 236 aa13.84□□□□□ -0.19
HDLBP-229ENST00000460826 DEFB124Q8NES8 71 aa13.84□□□□□ -0.19
HDLBP-229ENST00000460826 SETD7Q8WTS6 366 aaKnown RBP13.84□□□□□ -0.19
HDLBP-229ENST00000460826 PEX13Q92968 403 aa13.84□□□□□ -0.19
HDLBP-229ENST00000460826 FCRL3Q96P31 734 aaPredicted RBP13.84□□□□□ -0.19
HDLBP-229ENST00000460826 OR2M4Q96R27 311 aa13.84□□□□□ -0.19
HDLBP-229ENST00000460826 WDR83Q9BRX9 315 aaKnown RBP13.84□□□□□ -0.19
HDLBP-229ENST00000460826 WHRNQ9P202 907 aa13.84□□□□□ -0.19
HDLBP-229ENST00000460826 GPSM3Q9Y4H4 160 aa13.84□□□□□ -0.19
HDLBP-229ENST00000460826 DCHS1Q96JQ0 3298 aa13.84□□□□□ -0.19
HDLBP-229ENST00000460826 ESYT3A0FGR9 886 aa13.83□□□□□ -0.2
HDLBP-229ENST00000460826 BHMG1C9JSJ3 638 aaPredicted RBP13.83□□□□□ -0.2
HDLBP-229ENST00000460826 CHUKO15111 745 aa13.83□□□□□ -0.2
HDLBP-229ENST00000460826 FLRT2O43155 660 aa13.83□□□□□ -0.2
HDLBP-229ENST00000460826 CBFA2T3O75081 653 aa13.83□□□□□ -0.2
HDLBP-229ENST00000460826 CDK14O94921 469 aa13.83□□□□□ -0.2
HDLBP-229ENST00000460826 AK4P27144 223 aaPredicted RBP13.83□□□□□ -0.2
HDLBP-229ENST00000460826 CTSCP53634 463 aa13.83□□□□□ -0.2
HDLBP-229ENST00000460826 CTBSQ01459 385 aa13.83□□□□□ -0.2
HDLBP-229ENST00000460826 CACNG1Q06432 222 aa13.83□□□□□ -0.2
HDLBP-229ENST00000460826 TMEM115Q12893 351 aaPredicted RBP13.83□□□□□ -0.2
HDLBP-229ENST00000460826 DBN1Q16643 649 aa13.83□□□□□ -0.2
HDLBP-229ENST00000460826 GPR33Q49SQ1 333 aa13.83□□□□□ -0.2
HDLBP-229ENST00000460826 ANKRD20A4Q4UJ75 823 aa13.83□□□□□ -0.2
HDLBP-229ENST00000460826 AFTPHQ6ULP2 937 aa13.83□□□□□ -0.2
HDLBP-229ENST00000460826 CRTC3Q6UUV7 619 aa13.83□□□□□ -0.2
HDLBP-229ENST00000460826 ZDHHC24Q6UX98 284 aa13.83□□□□□ -0.2
HDLBP-229ENST00000460826 TAS2R42Q7RTR8 314 aa13.83□□□□□ -0.2
HDLBP-229ENST00000460826 GALNT13Q8IUC8 556 aa13.83□□□□□ -0.2
HDLBP-229ENST00000460826 ZNF547Q8IVP9 402 aa13.83□□□□□ -0.2
HDLBP-229ENST00000460826 FSTL5Q8N475 847 aaPredicted RBP13.83□□□□□ -0.2
HDLBP-229ENST00000460826 CEP112Q8N8E3 955 aa13.83□□□□□ -0.2
HDLBP-229ENST00000460826 RASGEF1AQ8N9B8 481 aa13.83□□□□□ -0.2
HDLBP-229ENST00000460826 OR6P1Q8NGX9 317 aa13.83□□□□□ -0.2
HDLBP-229ENST00000460826 OR4L1Q8NH43 312 aa13.83□□□□□ -0.2
HDLBP-229ENST00000460826 BAHD1Q8TBE0 780 aaPredicted RBP13.83□□□□□ -0.2
HDLBP-229ENST00000460826 ZNF669Q96BR6 464 aaPredicted RBP13.83□□□□□ -0.2
HDLBP-229ENST00000460826 ULK4Q96C45 1275 aa13.83□□□□□ -0.2
HDLBP-229ENST00000460826 BOCQ9BWV1 1114 aa13.83□□□□□ -0.2
HDLBP-229ENST00000460826 RAB17Q9H0T7 212 aa13.83□□□□□ -0.2
HDLBP-229ENST00000460826 L2HGDHQ9H9P8 463 aa13.83□□□□□ -0.2
HDLBP-229ENST00000460826 DLL3Q9NYJ7 618 aa13.83□□□□□ -0.2
HDLBP-229ENST00000460826 SAMD15Q9P1V8 674 aa13.83□□□□□ -0.2
HDLBP-229ENST00000460826 MARCH4Q9P2E8 410 aaPredicted RBP13.83□□□□□ -0.2
HDLBP-229ENST00000460826 ZNHIT2Q9UHR6 403 aa13.83□□□□□ -0.2
HDLBP-229ENST00000460826 DMGDHQ9UI17 866 aaKnown RBP13.83□□□□□ -0.2
HDLBP-229ENST00000460826 PCOLCE2Q9UKZ9 415 aa13.83□□□□□ -0.2
HDLBP-229ENST00000460826 UTP11Q9Y3A2 253 aaKnown RBP13.83□□□□□ -0.2
HDLBP-229ENST00000460826 MAD1L1Q9Y6D9 718 aa13.83□□□□□ -0.2
HDLBP-229ENST00000460826 CSNK1G3Q9Y6M4 447 aa13.83□□□□□ -0.2
HDLBP-229ENST00000460826 ZCWPW2A0A1B0GU75 182 aa13.82□□□□□ -0.2
HDLBP-229ENST00000460826 FAM237BA0A1B0GVD1 139 aa13.82□□□□□ -0.2
HDLBP-229ENST00000460826 DCDC2BA2VCK2 349 aa13.82□□□□□ -0.2
HDLBP-229ENST00000460826 LMO7DNF2Z398 122 aa13.82□□□□□ -0.2
HDLBP-229ENST00000460826 SMAPO00193 183 aa13.82□□□□□ -0.2
HDLBP-229ENST00000460826 GIPC1O14908 333 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms