RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 GSE1Q14687 1217 aa15.93■□□□□ 0.14
COL7A1-203ENST00000459756 AMZ1Q400G9 498 aa15.93■□□□□ 0.14
COL7A1-203ENST00000459756 MAP9Q49MG5 647 aa15.93■□□□□ 0.14
COL7A1-203ENST00000459756 ATP13A5Q4VNC0 1218 aa15.93■□□□□ 0.14
COL7A1-203ENST00000459756 FOXR1Q6PIV2 292 aa15.93■□□□□ 0.14
COL7A1-203ENST00000459756 RANBP10Q6VN20 620 aa15.93■□□□□ 0.14
COL7A1-203ENST00000459756 RAB11FIP2Q7L804 512 aa15.93■□□□□ 0.14
COL7A1-203ENST00000459756 ADGRG6Q86SQ4 1221 aa15.93■□□□□ 0.14
COL7A1-203ENST00000459756 PIM3Q86V86 326 aa15.93■□□□□ 0.14
COL7A1-203ENST00000459756 CCDC112Q8NEF3 446 aa15.93■□□□□ 0.14
COL7A1-203ENST00000459756 CCDC110Q8TBZ0 833 aa15.93■□□□□ 0.14
COL7A1-203ENST00000459756 SLC37A2Q8TED4 501 aa15.93■□□□□ 0.14
COL7A1-203ENST00000459756 TMEM159Q96B96 161 aa15.93■□□□□ 0.14
COL7A1-203ENST00000459756 FICDQ9BVA6 458 aa15.93■□□□□ 0.14
COL7A1-203ENST00000459756 IL26Q9NPH9 171 aa15.93■□□□□ 0.14
COL7A1-203ENST00000459756 TBC1D29Q9UFV1 150 aa15.93■□□□□ 0.14
COL7A1-203ENST00000459756 KCNK6Q9Y257 313 aa15.93■□□□□ 0.14
COL7A1-203ENST00000459756 A6NCN8 305 aa15.92■□□□□ 0.14
COL7A1-203ENST00000459756 C5orf60A6NFR6 353 aa15.92■□□□□ 0.14
COL7A1-203ENST00000459756 CDRT15L2A8MXV6 281 aa15.92■□□□□ 0.14
COL7A1-203ENST00000459756 KMOO15229 486 aa15.92■□□□□ 0.14
COL7A1-203ENST00000459756 TNFSF15O95150 251 aa15.92■□□□□ 0.14
COL7A1-203ENST00000459756 EML2O95834 649 aa15.92■□□□□ 0.14
COL7A1-203ENST00000459756 ITPKBP27987 946 aa15.92■□□□□ 0.14
COL7A1-203ENST00000459756 ADRA1AP35348 466 aa15.92■□□□□ 0.14
COL7A1-203ENST00000459756 CLCNKAP51800 687 aa15.92■□□□□ 0.14
COL7A1-203ENST00000459756 CCDC173Q0VFZ6 552 aa15.92■□□□□ 0.14
COL7A1-203ENST00000459756 SQSTM1Q13501 440 aa15.92■□□□□ 0.14
COL7A1-203ENST00000459756 ZNF648Q5T619 568 aaPredicted RBP15.92■□□□□ 0.14
COL7A1-203ENST00000459756 IYDQ6PHW0 289 aa15.92■□□□□ 0.14
COL7A1-203ENST00000459756 SLITRK4Q8IW52 837 aa15.92■□□□□ 0.14
COL7A1-203ENST00000459756 FBXO39Q8N4B4 442 aa15.92■□□□□ 0.14
COL7A1-203ENST00000459756 BRSK1Q8TDC3 778 aa15.92■□□□□ 0.14
COL7A1-203ENST00000459756 LRRC45Q96CN5 670 aa15.92■□□□□ 0.14
COL7A1-203ENST00000459756 RALYQ9UKM9 306 aaKnown RBP15.92■□□□□ 0.14
COL7A1-203ENST00000459756 TMPRSS11EQ9UL52 423 aa15.92■□□□□ 0.14
COL7A1-203ENST00000459756 KIR2DS5A0A0G2JLQ3 304 aa15.91■□□□□ 0.14
COL7A1-203ENST00000459756 A0A0G2JNG1 304 aa15.91■□□□□ 0.14
COL7A1-203ENST00000459756 GLYATL1P3A0A0U1RQE8 302 aa15.91■□□□□ 0.14
COL7A1-203ENST00000459756 PMS2P1A4D2B8 440 aa15.91■□□□□ 0.14
COL7A1-203ENST00000459756 OR5K4A6NMS3 321 aa15.91■□□□□ 0.14
COL7A1-203ENST00000459756 KIR2DS3K7RE56 304 aa15.91■□□□□ 0.14
COL7A1-203ENST00000459756 CDK14O94921 469 aa15.91■□□□□ 0.14
COL7A1-203ENST00000459756 F3P13726 295 aa15.91■□□□□ 0.14
COL7A1-203ENST00000459756 CD1CP29017 333 aa15.91■□□□□ 0.14
COL7A1-203ENST00000459756 UGT1A5P35504 534 aa15.91■□□□□ 0.14
COL7A1-203ENST00000459756 GPLD1P80108 840 aa15.91■□□□□ 0.14
COL7A1-203ENST00000459756 ITGA9Q13797 1035 aa15.91■□□□□ 0.14
COL7A1-203ENST00000459756 KIR2DS5Q14953 304 aa15.91■□□□□ 0.14
COL7A1-203ENST00000459756 CRTC3Q6UUV7 619 aa15.91■□□□□ 0.14
COL7A1-203ENST00000459756 ARHGEF18Q6ZSZ5 1173 aa15.91■□□□□ 0.14
COL7A1-203ENST00000459756 USP53Q70EK8 1073 aa15.91■□□□□ 0.14
COL7A1-203ENST00000459756 TMPRSS9Q7Z410 1059 aa15.91■□□□□ 0.14
COL7A1-203ENST00000459756 CLEC14AQ86T13 490 aa15.91■□□□□ 0.14
COL7A1-203ENST00000459756 PDZD3Q86UT5 571 aa15.91■□□□□ 0.14
COL7A1-203ENST00000459756 LRRTM4Q86VH4 590 aa15.91■□□□□ 0.14
COL7A1-203ENST00000459756 SPACA3Q8IXA5 215 aa15.91■□□□□ 0.14
COL7A1-203ENST00000459756 AVL9Q8NBF6 648 aa15.91■□□□□ 0.14
COL7A1-203ENST00000459756 GDAP1Q8TB36 358 aa15.91■□□□□ 0.14
COL7A1-203ENST00000459756 SH3KBP1Q96B97 665 aa15.91■□□□□ 0.14
COL7A1-203ENST00000459756 CCDC97Q96F63 343 aaPredicted RBP15.91■□□□□ 0.14
COL7A1-203ENST00000459756 SLC38A3Q99624 504 aa15.91■□□□□ 0.14
COL7A1-203ENST00000459756 CMKLR1Q99788 373 aa15.91■□□□□ 0.14
COL7A1-203ENST00000459756 DPYSL5Q9BPU6 564 aa15.91■□□□□ 0.14
COL7A1-203ENST00000459756 TIMM29Q9BSF4 260 aa15.91■□□□□ 0.14
COL7A1-203ENST00000459756 ZCCHC2Q9C0B9 1178 aaKnown RBP15.91■□□□□ 0.14
COL7A1-203ENST00000459756 STN1Q9H668 368 aaKnown RBP15.91■□□□□ 0.14
COL7A1-203ENST00000459756 RDH14Q9HBH5 336 aa15.91■□□□□ 0.14
COL7A1-203ENST00000459756 SARS2Q9NP81 518 aaKnown RBP15.91■□□□□ 0.14
COL7A1-203ENST00000459756 KLC4Q9NSK0 619 aa15.91■□□□□ 0.14
COL7A1-203ENST00000459756 KCNK4Q9NYG8 393 aa15.91■□□□□ 0.14
COL7A1-203ENST00000459756 FEZ2Q9UHY8 353 aaPredicted RBP15.91■□□□□ 0.14
COL7A1-203ENST00000459756 GUCA1BQ9UMX6 200 aa15.91■□□□□ 0.14
COL7A1-203ENST00000459756 TRBV23OR9-2A0A075B6M9 112 aa15.9■□□□□ 0.14
COL7A1-203ENST00000459756 IGHV1OR21-1A0A087WYE8 117 aa15.9■□□□□ 0.14
COL7A1-203ENST00000459756 C2orf81A6NN90 581 aa15.9■□□□□ 0.14
COL7A1-203ENST00000459756 STX7O15400 261 aaKnown RBP15.9■□□□□ 0.14
COL7A1-203ENST00000459756 SNX2O60749 519 aa15.9■□□□□ 0.14
COL7A1-203ENST00000459756 MTX2O75431 263 aa15.9■□□□□ 0.14
COL7A1-203ENST00000459756 JMJD7P0C870 316 aa15.9■□□□□ 0.14
COL7A1-203ENST00000459756 LPOP22079 712 aaPredicted RBP15.9■□□□□ 0.14
COL7A1-203ENST00000459756 PDE1BQ01064 536 aa15.9■□□□□ 0.14
COL7A1-203ENST00000459756 HHEXQ03014 270 aa15.9■□□□□ 0.14
COL7A1-203ENST00000459756 TLE3Q04726 772 aa15.9■□□□□ 0.14
COL7A1-203ENST00000459756 TMEM115Q12893 351 aaPredicted RBP15.9■□□□□ 0.14
COL7A1-203ENST00000459756 GTF2H3Q13889 308 aa15.9■□□□□ 0.14
COL7A1-203ENST00000459756 TAF1AQ15573 450 aaPredicted RBP15.9■□□□□ 0.14
COL7A1-203ENST00000459756 CHRNA6Q15825 494 aa15.9■□□□□ 0.14
COL7A1-203ENST00000459756 INSCQ1MX18 579 aa15.9■□□□□ 0.14
COL7A1-203ENST00000459756 PARP6Q2NL67 630 aa15.9■□□□□ 0.14
COL7A1-203ENST00000459756 KHDC1Q4VXA5 237 aaKnown RBP15.9■□□□□ 0.14
COL7A1-203ENST00000459756 LDLRAP1Q5SW96 308 aa15.9■□□□□ 0.14
COL7A1-203ENST00000459756 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.9■□□□□ 0.14
COL7A1-203ENST00000459756 PHF19Q5T6S3 580 aa15.9■□□□□ 0.14
COL7A1-203ENST00000459756 FAM151BQ6UXP7 276 aa15.9■□□□□ 0.14
COL7A1-203ENST00000459756 SLC9B2Q86UD5 537 aa15.9■□□□□ 0.14
COL7A1-203ENST00000459756 ZNF547Q8IVP9 402 aa15.9■□□□□ 0.14
COL7A1-203ENST00000459756 KLHDC8BQ8IXV7 354 aa15.9■□□□□ 0.14
COL7A1-203ENST00000459756 FAM71DQ8N9W8 422 aa15.9■□□□□ 0.14
COL7A1-203ENST00000459756 SLC35B2Q8TB61 432 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms