RNA–Protein interactions for RNA: ENST00000458059.7

CNEP1R1-203, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,965 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-203ENST00000458059 IDO1P14902 403 aa19.42■□□□□ 0.7
CNEP1R1-203ENST00000458059 RPL9P32969 192 aaKnown RBP19.42■□□□□ 0.7
CNEP1R1-203ENST00000458059 NUP107P57740 925 aa19.42■□□□□ 0.7
CNEP1R1-203ENST00000458059 GNA12Q03113 381 aa19.42■□□□□ 0.7
CNEP1R1-203ENST00000458059 MSANTD2Q6P1R3 559 aa19.42■□□□□ 0.7
CNEP1R1-203ENST00000458059 ZC3H7AQ8IWR0 971 aaKnown RBP19.42■□□□□ 0.7
CNEP1R1-203ENST00000458059 UMODL1-AS1Q8N2C9 162 aa19.42■□□□□ 0.7
CNEP1R1-203ENST00000458059 LRRC43Q8N309 656 aa19.42■□□□□ 0.7
CNEP1R1-203ENST00000458059 MFSD2AQ8NA29 543 aa19.42■□□□□ 0.7
CNEP1R1-203ENST00000458059 TNIP2Q8NFZ5 429 aa19.42■□□□□ 0.7
CNEP1R1-203ENST00000458059 FBXO30Q8TB52 745 aa19.42■□□□□ 0.7
CNEP1R1-203ENST00000458059 FEM1CQ96JP0 617 aa19.42■□□□□ 0.7
CNEP1R1-203ENST00000458059 NSMCE3Q96MG7 304 aa19.42■□□□□ 0.7
CNEP1R1-203ENST00000458059 AARSD1Q9BTE6 412 aaKnown RBP19.42■□□□□ 0.7
CNEP1R1-203ENST00000458059 ARMC7Q9H6L4 198 aa19.42■□□□□ 0.7
CNEP1R1-203ENST00000458059 CD274Q9NZQ7 290 aa19.42■□□□□ 0.7
CNEP1R1-203ENST00000458059 IFT80Q9P2H3 777 aaPredicted RBP19.42■□□□□ 0.7
CNEP1R1-203ENST00000458059 SUN2Q9UH99 717 aa19.42■□□□□ 0.7
CNEP1R1-203ENST00000458059 UTS2RQ9UKP6 389 aa19.42■□□□□ 0.7
CNEP1R1-203ENST00000458059 NOBOXO60393 691 aa19.41■□□□□ 0.7
CNEP1R1-203ENST00000458059 RPP40O75818 363 aaKnown RBP19.41■□□□□ 0.7
CNEP1R1-203ENST00000458059 CAPGP40121 348 aa19.41■□□□□ 0.7
CNEP1R1-203ENST00000458059 POLR2JP52435 117 aaKnown RBP19.41■□□□□ 0.7
CNEP1R1-203ENST00000458059 BNIP2Q12982 314 aa19.41■□□□□ 0.7
CNEP1R1-203ENST00000458059 MAP2K5Q13163 448 aa19.41■□□□□ 0.7
CNEP1R1-203ENST00000458059 FAM110CQ1W6H9 321 aa19.41■□□□□ 0.7
CNEP1R1-203ENST00000458059 TMTC4Q5T4D3 741 aa19.41■□□□□ 0.7
CNEP1R1-203ENST00000458059 FAM86B1Q8N7N1 296 aa19.41■□□□□ 0.7
CNEP1R1-203ENST00000458059 TBCDQ9BTW9 1192 aa19.41■□□□□ 0.7
CNEP1R1-203ENST00000458059 ZMYM5Q9UJ78 669 aa19.41■□□□□ 0.7
CNEP1R1-203ENST00000458059 GIT1Q9Y2X7 761 aa19.41■□□□□ 0.7
CNEP1R1-203ENST00000458059 TANC1Q9C0D5 1861 aa19.41■□□□□ 0.7
CNEP1R1-203ENST00000458059 SCN4AP35499 1836 aa19.41■□□□□ 0.7
CNEP1R1-203ENST00000458059 RHOQP17081 205 aa19.41■□□□□ 0.7
CNEP1R1-203ENST00000458059 MATN1P21941 496 aa19.41■□□□□ 0.7
CNEP1R1-203ENST00000458059 HRH2P25021 359 aa19.41■□□□□ 0.7
CNEP1R1-203ENST00000458059 STC1P52823 247 aa19.41■□□□□ 0.7
CNEP1R1-203ENST00000458059 GLYATQ6IB77 296 aa19.41■□□□□ 0.7
CNEP1R1-203ENST00000458059 STAG3L4Q8TBR4 150 aa19.41■□□□□ 0.7
CNEP1R1-203ENST00000458059 TSPAN18Q96SJ8 248 aa19.41■□□□□ 0.7
CNEP1R1-203ENST00000458059 PARK7Q99497 189 aaKnown RBP19.41■□□□□ 0.7
CNEP1R1-203ENST00000458059 SEZ6LQ9BYH1 1024 aa19.41■□□□□ 0.7
CNEP1R1-203ENST00000458059 POLR1EQ9GZS1 481 aaKnown RBP19.41■□□□□ 0.7
CNEP1R1-203ENST00000458059 MED16Q9Y2X0 877 aa19.41■□□□□ 0.7
CNEP1R1-203ENST00000458059 CNPP09543 421 aaKnown RBP19.41■□□□□ 0.7
CNEP1R1-203ENST00000458059 MAP4P27816 1152 aaKnown RBP19.41■□□□□ 0.7
CNEP1R1-203ENST00000458059 SHMT2P34897 504 aa19.41■□□□□ 0.7
CNEP1R1-203ENST00000458059 ATP4BP51164 291 aa19.41■□□□□ 0.7
CNEP1R1-203ENST00000458059 KCNQ1P51787 676 aa19.41■□□□□ 0.7
CNEP1R1-203ENST00000458059 SETMARQ53H47 684 aaPredicted RBP19.41■□□□□ 0.7
CNEP1R1-203ENST00000458059 TAF2Q6P1X5 1199 aa19.41■□□□□ 0.7
CNEP1R1-203ENST00000458059 PATL1Q86TB9 770 aaKnown RBP19.41■□□□□ 0.7
CNEP1R1-203ENST00000458059 PIANPQ8IYJ0 282 aa19.41■□□□□ 0.7
CNEP1R1-203ENST00000458059 GTF3C2Q8WUA4 911 aaPredicted RBP19.41■□□□□ 0.7
CNEP1R1-203ENST00000458059 EEF1AKMT1Q8WVE0 214 aa19.41■□□□□ 0.7
CNEP1R1-203ENST00000458059 FIG4Q92562 907 aa19.41■□□□□ 0.7
CNEP1R1-203ENST00000458059 PLGRKTQ9HBL7 147 aa19.41■□□□□ 0.7
CNEP1R1-203ENST00000458059 CHCHD3Q9NX63 227 aaKnown RBP19.41■□□□□ 0.7
CNEP1R1-203ENST00000458059 PCDHGC4Q9Y5F7 938 aa19.41■□□□□ 0.7
CNEP1R1-203ENST00000458059 DGKBQ9Y6T7 804 aa19.41■□□□□ 0.7
CNEP1R1-203ENST00000458059 ALBP02768 609 aa19.4■□□□□ 0.7
CNEP1R1-203ENST00000458059 UGT1A1P22309 533 aa19.4■□□□□ 0.7
CNEP1R1-203ENST00000458059 UGT1A4P22310 534 aa19.4■□□□□ 0.7
CNEP1R1-203ENST00000458059 UGT1A3P35503 534 aa19.4■□□□□ 0.7
CNEP1R1-203ENST00000458059 UGT1A5P35504 534 aa19.4■□□□□ 0.7
CNEP1R1-203ENST00000458059 OR1G1P47890 313 aa19.4■□□□□ 0.7
CNEP1R1-203ENST00000458059 PSAPL1Q6NUJ1 521 aa19.4■□□□□ 0.7
CNEP1R1-203ENST00000458059 TRIM74Q86UV6 250 aa19.4■□□□□ 0.7
CNEP1R1-203ENST00000458059 TRIM73Q86UV7 250 aa19.4■□□□□ 0.7
CNEP1R1-203ENST00000458059 FUBP1Q96AE4 644 aaKnown RBP19.4■□□□□ 0.7
CNEP1R1-203ENST00000458059 HIPK3Q9H422 1215 aa19.4■□□□□ 0.7
CNEP1R1-203ENST00000458059 SMURF2Q9HAU4 748 aa19.4■□□□□ 0.7
CNEP1R1-203ENST00000458059 PRDM5Q9NQX1 630 aaPredicted RBP19.4■□□□□ 0.7
CNEP1R1-203ENST00000458059 GPR182O15218 404 aa19.4■□□□□ 0.7
CNEP1R1-203ENST00000458059 PAPSS2O95340 614 aaPredicted RBP19.4■□□□□ 0.7
CNEP1R1-203ENST00000458059 TPD52P55327 224 aaPredicted RBP19.4■□□□□ 0.7
CNEP1R1-203ENST00000458059 SGO1Q5FBB7 561 aa19.4■□□□□ 0.7
CNEP1R1-203ENST00000458059 PRMT9Q6P2P2 845 aa19.4■□□□□ 0.7
CNEP1R1-203ENST00000458059 C16orf87Q6PH81 154 aa19.4■□□□□ 0.7
CNEP1R1-203ENST00000458059 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.4■□□□□ 0.72e-6■■■■■ 54.9
CNEP1R1-203ENST00000458059 DGCR6LQ9BY27 220 aa19.4■□□□□ 0.7
CNEP1R1-203ENST00000458059 SLC52A3Q9NQ40 469 aa19.4■□□□□ 0.7
CNEP1R1-203ENST00000458059 MRGBPQ9NV56 204 aa19.4■□□□□ 0.7
CNEP1R1-203ENST00000458059 TAS2R13Q9NYV9 303 aa19.4■□□□□ 0.7
CNEP1R1-203ENST00000458059 PKD2L2Q9NZM6 624 aa19.4■□□□□ 0.7
CNEP1R1-203ENST00000458059 TLR6Q9Y2C9 796 aa19.4■□□□□ 0.7
CNEP1R1-203ENST00000458059 TCRBV5S2A0A599 114 aa19.39■□□□□ 0.7
CNEP1R1-203ENST00000458059 GUCA1CO95843 209 aa19.39■□□□□ 0.7
CNEP1R1-203ENST00000458059 FGF4P08620 206 aa19.39■□□□□ 0.7
CNEP1R1-203ENST00000458059 RAD51Q06609 339 aa19.39■□□□□ 0.7
CNEP1R1-203ENST00000458059 BFSP2Q13515 415 aa19.39■□□□□ 0.7
CNEP1R1-203ENST00000458059 GLT6D1Q7Z4J2 308 aa19.39■□□□□ 0.7
CNEP1R1-203ENST00000458059 LPCAT1Q8NF37 534 aa19.39■□□□□ 0.7
CNEP1R1-203ENST00000458059 FBXO32Q969P5 355 aa19.39■□□□□ 0.7
CNEP1R1-203ENST00000458059 PPP1R2P1Q96PQ5 205 aa19.39■□□□□ 0.7
CNEP1R1-203ENST00000458059 KATNAL1Q9BW62 490 aa19.39■□□□□ 0.7
CNEP1R1-203ENST00000458059 CCSER2Q9H7U1 834 aa19.39■□□□□ 0.7
CNEP1R1-203ENST00000458059 MARCH2Q9P0N8 246 aa19.39■□□□□ 0.7
CNEP1R1-203ENST00000458059 WARS2Q9UGM6 360 aaKnown RBP19.39■□□□□ 0.7
CNEP1R1-203ENST00000458059 MYO16Q9Y6X6 1858 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms