RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 RPL3LQ92901 407 aaKnown RBP10.24□□□□□ -0.77
CLIP4-208ENST00000456385 AURKBQ96GD4 344 aaPredicted RBP10.24□□□□□ -0.77
CLIP4-208ENST00000456385 GJD4Q96KN9 370 aaPredicted RBP10.24□□□□□ -0.77
CLIP4-208ENST00000456385 PPM1MQ96MI6 270 aa10.24□□□□□ -0.77
CLIP4-208ENST00000456385 CLSTN3Q9BQT9 956 aa10.24□□□□□ -0.77
CLIP4-208ENST00000456385 NFKBIZQ9BYH8 718 aa10.24□□□□□ -0.77
CLIP4-208ENST00000456385 TRIT1Q9H3H1 467 aaKnown RBP10.24□□□□□ -0.77
CLIP4-208ENST00000456385 MUC13Q9H3R2 512 aa10.24□□□□□ -0.77
CLIP4-208ENST00000456385 PLEKHA5Q9HAU0 1116 aa10.24□□□□□ -0.77
CLIP4-208ENST00000456385 DDIT4Q9NX09 232 aa10.24□□□□□ -0.77
CLIP4-208ENST00000456385 FBXW11Q9UKB1 542 aa10.24□□□□□ -0.77
CLIP4-208ENST00000456385 CRYL1Q9Y2S2 319 aa10.24□□□□□ -0.77
CLIP4-208ENST00000456385 TMA7Q9Y2S6 64 aaKnown RBP10.24□□□□□ -0.77
CLIP4-208ENST00000456385 OR51F1A6NGY5 319 aa10.23□□□□□ -0.77
CLIP4-208ENST00000456385 AP3B1O00203 1094 aa10.23□□□□□ -0.77
CLIP4-208ENST00000456385 SNPHO15079 494 aa10.23□□□□□ -0.77
CLIP4-208ENST00000456385 SLC22A1O15245 554 aa10.23□□□□□ -0.77
CLIP4-208ENST00000456385 CACNG3O60359 315 aa10.23□□□□□ -0.77
CLIP4-208ENST00000456385 SEC24AO95486 1093 aa10.23□□□□□ -0.77
CLIP4-208ENST00000456385 CHEK2O96017 543 aa10.23□□□□□ -0.77
CLIP4-208ENST00000456385 EIF2S1P05198 315 aaKnown RBP10.23□□□□□ -0.77
CLIP4-208ENST00000456385 FGF4P08620 206 aa10.23□□□□□ -0.77
CLIP4-208ENST00000456385 TGFB3P10600 412 aa10.23□□□□□ -0.77
CLIP4-208ENST00000456385 INSRRP14616 1297 aa10.23□□□□□ -0.77
CLIP4-208ENST00000456385 SPNP16150 400 aa10.23□□□□□ -0.77
CLIP4-208ENST00000456385 PAMP19021 973 aa10.23□□□□□ -0.77
CLIP4-208ENST00000456385 HTR1EP28566 365 aa10.23□□□□□ -0.77
CLIP4-208ENST00000456385 IL12AP29459 219 aa10.23□□□□□ -0.77
CLIP4-208ENST00000456385 ALDH7A1P49419 539 aaKnown RBP10.23□□□□□ -0.77
CLIP4-208ENST00000456385 NKG7Q16617 165 aa10.23□□□□□ -0.77
CLIP4-208ENST00000456385 SMUG1Q53HV7 270 aa10.23□□□□□ -0.77
CLIP4-208ENST00000456385 CELF3Q5SZQ8 465 aaKnown RBP10.23□□□□□ -0.77
CLIP4-208ENST00000456385 C9orf57Q5W0N0 161 aa10.23□□□□□ -0.77
CLIP4-208ENST00000456385 KIAA0930Q6ICG6 404 aaPredicted RBP10.23□□□□□ -0.77
CLIP4-208ENST00000456385 ENPP6Q6UWR7 440 aa10.23□□□□□ -0.77
CLIP4-208ENST00000456385 SLC22A15Q8IZD6 547 aa10.23□□□□□ -0.77
CLIP4-208ENST00000456385 ZNF555Q8NEP9 628 aa10.23□□□□□ -0.77
CLIP4-208ENST00000456385 ITFG1Q8TB96 612 aa10.23□□□□□ -0.77
CLIP4-208ENST00000456385 DYNC2LI1Q8TCX1 351 aa10.23□□□□□ -0.77
CLIP4-208ENST00000456385 TXNDC15Q96J42 360 aa10.23□□□□□ -0.77
CLIP4-208ENST00000456385 SLC2A13Q96QE2 648 aa10.23□□□□□ -0.77
CLIP4-208ENST00000456385 RHNO1Q9BSD3 238 aa10.23□□□□□ -0.77
CLIP4-208ENST00000456385 FSD1LQ9BXM9 530 aa10.23□□□□□ -0.77
CLIP4-208ENST00000456385 CEP44Q9C0F1 390 aa10.23□□□□□ -0.77
CLIP4-208ENST00000456385 MARCH7Q9H992 704 aa10.23□□□□□ -0.77
CLIP4-208ENST00000456385 SEMA4BQ9NPR2 832 aaPredicted RBP10.23□□□□□ -0.77
CLIP4-208ENST00000456385 ITM2CQ9NQX7 267 aa10.23□□□□□ -0.77
CLIP4-208ENST00000456385 ERVK-18Q9QC07 812 aa10.23□□□□□ -0.77
CLIP4-208ENST00000456385 PCDHGA3Q9Y5H0 932 aa10.23□□□□□ -0.77
CLIP4-208ENST00000456385 MYLKQ15746 1914 aa10.23□□□□□ -0.77
CLIP4-208ENST00000456385 EEDO75530 441 aaKnown RBP10.23□□□□□ -0.77
CLIP4-208ENST00000456385 RFPL2O75678 378 aa10.23□□□□□ -0.77
CLIP4-208ENST00000456385 KRT75O95678 551 aa10.23□□□□□ -0.77
CLIP4-208ENST00000456385 CYBBP04839 570 aa10.23□□□□□ -0.77
CLIP4-208ENST00000456385 RAP2AP10114 183 aa10.23□□□□□ -0.77
CLIP4-208ENST00000456385 PRDX3P30048 256 aaKnown RBP10.23□□□□□ -0.77
CLIP4-208ENST00000456385 CD6P30203 668 aa10.23□□□□□ -0.77
CLIP4-208ENST00000456385 ADRA1AP35348 466 aa10.23□□□□□ -0.77
CLIP4-208ENST00000456385 CXCR3P49682 368 aa10.23□□□□□ -0.77
CLIP4-208ENST00000456385 MAP3K7CLP57077 242 aa10.23□□□□□ -0.77
CLIP4-208ENST00000456385 EEFSECP57772 596 aaKnown RBP10.23□□□□□ -0.77
CLIP4-208ENST00000456385 GABARAPL2P60520 117 aa10.23□□□□□ -0.77
CLIP4-208ENST00000456385 CCNA1P78396 465 aa10.23□□□□□ -0.77
CLIP4-208ENST00000456385 OR4D1Q15615 310 aa10.23□□□□□ -0.77
CLIP4-208ENST00000456385 AAK1Q2M2I8 961 aa10.23□□□□□ -0.77
CLIP4-208ENST00000456385 COQ5Q5HYK3 327 aa10.23□□□□□ -0.77
CLIP4-208ENST00000456385 CCDC81Q6ZN84 652 aa10.23□□□□□ -0.77
CLIP4-208ENST00000456385 PROSER1Q86XN7 944 aa10.23□□□□□ -0.77
CLIP4-208ENST00000456385 LYSMD2Q8IV50 215 aa10.23□□□□□ -0.77
CLIP4-208ENST00000456385 TMEM199Q8N511 208 aa10.23□□□□□ -0.77
CLIP4-208ENST00000456385 RHOXF1Q8NHV9 184 aa10.23□□□□□ -0.77
CLIP4-208ENST00000456385 EDEM1Q92611 657 aa10.23□□□□□ -0.77
CLIP4-208ENST00000456385 PABPC5Q96DU9 382 aaKnown RBP10.23□□□□□ -0.77
CLIP4-208ENST00000456385 DACH2Q96NX9 599 aa10.23□□□□□ -0.77
CLIP4-208ENST00000456385 LRRC3Q9BY71 257 aa10.23□□□□□ -0.77
CLIP4-208ENST00000456385 DUSP16Q9BY84 665 aa10.23□□□□□ -0.77
CLIP4-208ENST00000456385 SLIRPQ9GZT3 109 aaKnown RBP10.23□□□□□ -0.77
CLIP4-208ENST00000456385 TKTL2Q9H0I9 626 aa10.23□□□□□ -0.77
CLIP4-208ENST00000456385 GOLGA2P5Q9HBQ8 144 aa10.23□□□□□ -0.77
CLIP4-208ENST00000456385 TRPV5Q9NQA5 729 aa10.23□□□□□ -0.77
CLIP4-208ENST00000456385 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.23□□□□□ -0.77
CLIP4-208ENST00000456385 GINS2Q9Y248 185 aa10.23□□□□□ -0.77
CLIP4-208ENST00000456385 A0A0G2JMZ2 1700 aa10.22□□□□□ -0.77
CLIP4-208ENST00000456385 LRRC37A2A6NM11 1700 aa10.22□□□□□ -0.77
CLIP4-208ENST00000456385 LOC100130705A0A1B0GUX0 176 aa10.22□□□□□ -0.77
CLIP4-208ENST00000456385 FAM92AA1XBS5 289 aa10.22□□□□□ -0.77
CLIP4-208ENST00000456385 DYTNA2CJ06 578 aa10.22□□□□□ -0.77
CLIP4-208ENST00000456385 SYCE1LA8MT33 242 aa10.22□□□□□ -0.77
CLIP4-208ENST00000456385 TBX1O43435 398 aa10.22□□□□□ -0.77
CLIP4-208ENST00000456385 HBP1O60381 514 aa10.22□□□□□ -0.77
CLIP4-208ENST00000456385 SLC22A3O75751 556 aa10.22□□□□□ -0.77
CLIP4-208ENST00000456385 DLGAP3O95886 979 aa10.22□□□□□ -0.77
CLIP4-208ENST00000456385 PGK2P07205 417 aa10.22□□□□□ -0.77
CLIP4-208ENST00000456385 MTHFD2P13995 350 aa10.22□□□□□ -0.77
CLIP4-208ENST00000456385 DNAJB2P25686 324 aa10.22□□□□□ -0.77
CLIP4-208ENST00000456385 EIF2DP41214 584 aaKnown RBP10.22□□□□□ -0.77
CLIP4-208ENST00000456385 HCAR3P49019 387 aa10.22□□□□□ -0.77
CLIP4-208ENST00000456385 NEK2P51955 445 aa10.22□□□□□ -0.77
CLIP4-208ENST00000456385 POLR2JP52435 117 aaKnown RBP10.22□□□□□ -0.77
CLIP4-208ENST00000456385 COPZ1P61923 177 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms