RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 CHP1Q99653 195 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 TBL1YQ9BQ87 522 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 NT5DC2Q9H857 520 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 CD248Q9HCU0 757 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 MID1IP1Q9NPA3 183 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 CNTNAP4Q9C0A0 1308 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 FAM237BA0A1B0GVD1 139 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 UROSP10746 265 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 PAX7P23759 505 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 PPM1AP35813 382 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 NDST1P52848 882 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 ACTA2P62736 377 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 PPP3R1P63098 170 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 ACTG2P63267 376 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 FMO1Q01740 532 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 SPOCK1Q08629 439 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 ZNF423Q2M1K9 1284 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 FBXO47Q5MNV8 452 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 MILR1Q7Z6M3 343 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 GATAD2AQ86YP4 633 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 ASB15Q8WXK1 588 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 CDRT15Q96T59 188 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 TXN2Q99757 166 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 HEPHQ9BQS7 1158 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 ISCA1Q9BUE6 129 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 FAM217BQ9NTX9 383 aaPredicted RBP5.18□□□□□ -1.58
CSMD3-204ENST00000455883 FARSAQ9Y285 508 aaKnown RBP5.18□□□□□ -1.58
CSMD3-204ENST00000455883 SLC27A6Q9Y2P4 619 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 DHRS7Q9Y394 339 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 PXDNQ92626 1479 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 A0A1B0GUL6 1792 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 GRK5P34947 590 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 GMPRP36959 345 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 RPS9P46781 194 aaKnown RBP5.18□□□□□ -1.58
CSMD3-204ENST00000455883 GYG1P46976 350 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 SREBF2Q12772 1141 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 AUHQ13825 339 aaKnown RBP5.18□□□□□ -1.58
CSMD3-204ENST00000455883 DSG2Q14126 1118 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 SMU1Q2TAY7 513 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 EIF2S3LQ2VIR3 472 aaKnown RBP5.18□□□□□ -1.58
CSMD3-204ENST00000455883 UGT3A2Q3SY77 523 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 MPZL3Q6UWV2 235 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 KCTD1Q719H9 257 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 TIPARPQ7Z3E1 657 aaKnown RBP5.18□□□□□ -1.58
CSMD3-204ENST00000455883 TMC7Q7Z402 723 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 IPMKQ8NFU5 416 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 TNFRSF25Q93038 417 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 C8orf48Q96LL4 319 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 PFDN5Q99471 154 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 ALG13Q9NP73 1137 aaKnown RBP5.18□□□□□ -1.58
CSMD3-204ENST00000455883 C12orf4Q9NQ89 552 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 PCSK1NQ9UHG2 260 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 TMPRSS11EQ9UL52 423 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 GBF1Q92538 1859 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 GSG1L2A8MUP6 293 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 EIF3FO00303 357 aaPredicted RBP5.18□□□□□ -1.58
CSMD3-204ENST00000455883 DLGAP1O14490 977 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 TEX33O43247 280 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 EDF1O60869 148 aaKnown RBP5.18□□□□□ -1.58
CSMD3-204ENST00000455883 ENTPD6O75354 484 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 CYP17A1P05093 508 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 PGRP06401 933 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 FAM76BQ5HYJ3 339 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 ZBTB8BQ8NAP8 495 aaPredicted RBP5.18□□□□□ -1.58
CSMD3-204ENST00000455883 USP7Q93009 1102 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 HYLS1Q96M11 299 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 CXorf21Q9HAI6 301 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 POLR3BQ9NW08 1133 aaPredicted RBP5.18□□□□□ -1.58
CSMD3-204ENST00000455883 POFUT2Q9Y2G5 429 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 STXBP5LQ9Y2K9 1186 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 DOPEY1Q5JWR5 2465 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 ASTN1O14525 1302 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 DDX3YO15523 660 aaKnown RBP5.18□□□□□ -1.58
CSMD3-204ENST00000455883 CYP27B1O15528 508 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 NFICP08651 508 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 PDHBP11177 359 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 AOC1P19801 751 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 S100PP25815 95 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 SNAPC2Q13487 334 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 DALRD3Q5D0E6 543 aaKnown RBP5.18□□□□□ -1.58
CSMD3-204ENST00000455883 PIGGQ5H8A4 983 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 CPTPQ5TA50 214 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 ARHGAP36Q6ZRI8 547 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 SCN4BQ8IWT1 228 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 MAPK15Q8TD08 544 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 C2orf15Q8WU43 125 aaKnown RBP5.18□□□□□ -1.58
CSMD3-204ENST00000455883 SEC14L1Q92503 715 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 SLC9A6Q92581 669 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 NXPE2Q96DL1 559 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 DDIT4Q9NX09 232 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 ACSL5Q9ULC5 683 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 PIK3C2AO00443 1686 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 SH3PXD2BA1X283 911 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 SLC25A12O75746 678 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 NDUFS1P28331 727 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 NOS2P35228 1153 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 LIPEQ05469 1076 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 HEPACAMQ14CZ8 416 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 LRRC41Q15345 812 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 LAYNQ6UX15 382 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms