RNA–Protein interactions for RNA: ENST00000454555.2

LINC00343-203, long intergenic non-protein coding RNA 343, humanhuman

TSL 2 BASIC

Gene LINC00343, Length 1,765 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-203ENST00000454555 CD1EP15812 388 aa13.21□□□□□ -0.29
LINC00343-203ENST00000454555 IL10P22301 178 aa13.21□□□□□ -0.29
LINC00343-203ENST00000454555 MYF6P23409 242 aa13.21□□□□□ -0.29
LINC00343-203ENST00000454555 MSX2P35548 267 aaPredicted RBP13.21□□□□□ -0.29
LINC00343-203ENST00000454555 MRPL19P49406 292 aaKnown RBP13.21□□□□□ -0.29
LINC00343-203ENST00000454555 ADARP55265 1226 aaKnown RBP13.21□□□□□ -0.29
LINC00343-203ENST00000454555 CSHL1Q14406 222 aa13.21□□□□□ -0.29
LINC00343-203ENST00000454555 MYBPC3Q14896 1274 aa13.21□□□□□ -0.29
LINC00343-203ENST00000454555 CYTH1Q15438 398 aa13.21□□□□□ -0.29
LINC00343-203ENST00000454555 NRF1Q16656 503 aa13.21□□□□□ -0.29
LINC00343-203ENST00000454555 HECTD3Q5T447 861 aa13.21□□□□□ -0.29
LINC00343-203ENST00000454555 RWDD4Q6NW29 188 aaKnown RBP13.21□□□□□ -0.29
LINC00343-203ENST00000454555 PAOXQ6QHF9 649 aa13.21□□□□□ -0.29
LINC00343-203ENST00000454555 OTOP3Q7RTS5 596 aa13.21□□□□□ -0.29
LINC00343-203ENST00000454555 MFSD6LQ8IWD5 586 aa13.21□□□□□ -0.29
LINC00343-203ENST00000454555 CLYBLQ8N0X4 340 aa13.21□□□□□ -0.29
LINC00343-203ENST00000454555 PCDH20Q8N6Y1 951 aaKnown RBP13.21□□□□□ -0.29
LINC00343-203ENST00000454555 HMGCLL1Q8TB92 370 aa13.21□□□□□ -0.29
LINC00343-203ENST00000454555 HLA-CQ95604 372 aa13.21□□□□□ -0.29
LINC00343-203ENST00000454555 PPWD1Q96BP3 646 aaKnown RBP13.21□□□□□ -0.29
LINC00343-203ENST00000454555 TCEAL4Q96EI5 215 aa13.21□□□□□ -0.29
LINC00343-203ENST00000454555 NECTIN4Q96NY8 510 aa13.21□□□□□ -0.29
LINC00343-203ENST00000454555 GPATCH1Q9BRR8 931 aaKnown RBP13.21□□□□□ -0.29
LINC00343-203ENST00000454555 POPDC3Q9HBV1 291 aa13.21□□□□□ -0.29
LINC00343-203ENST00000454555 PREBQ9HCU5 417 aa13.21□□□□□ -0.29
LINC00343-203ENST00000454555 OLA1Q9NTK5 396 aaKnown RBP13.21□□□□□ -0.29
LINC00343-203ENST00000454555 DDX18Q9NVP1 670 aaKnown RBP13.21□□□□□ -0.29
LINC00343-203ENST00000454555 TMEM45AQ9NWC5 275 aa13.21□□□□□ -0.29
LINC00343-203ENST00000454555 CHCHD3Q9NX63 227 aaKnown RBP13.21□□□□□ -0.29
LINC00343-203ENST00000454555 UBP1Q9NZI7 540 aa13.21□□□□□ -0.29
LINC00343-203ENST00000454555 CCDC167Q9P0B6 97 aa13.21□□□□□ -0.29
LINC00343-203ENST00000454555 PCDHGB4Q9UN71 923 aa13.21□□□□□ -0.29
LINC00343-203ENST00000454555 MRPS23Q9Y3D9 190 aaKnown RBP13.21□□□□□ -0.29
LINC00343-203ENST00000454555 PCDHGB5Q9Y5G0 923 aa13.21□□□□□ -0.29
LINC00343-203ENST00000454555 TMEM233B4DJY2 109 aa13.2□□□□□ -0.3
LINC00343-203ENST00000454555 H3BSA7 217 aa13.2□□□□□ -0.3
LINC00343-203ENST00000454555 NRG2O14511 850 aaPredicted RBP13.2□□□□□ -0.3
LINC00343-203ENST00000454555 GPIP06744 558 aa13.2□□□□□ -0.3
LINC00343-203ENST00000454555 GRIK2Q13002 908 aa13.2□□□□□ -0.3
LINC00343-203ENST00000454555 EIF4EBP2Q13542 120 aaPredicted RBP13.2□□□□□ -0.3
LINC00343-203ENST00000454555 GK3PQ14409 553 aa13.2□□□□□ -0.3
LINC00343-203ENST00000454555 SKIV2LQ15477 1246 aaKnown RBP13.2□□□□□ -0.3
LINC00343-203ENST00000454555 ZBED5Q49AG3 693 aa13.2□□□□□ -0.3
LINC00343-203ENST00000454555 ARHGAP15Q53QZ3 475 aa13.2□□□□□ -0.3
LINC00343-203ENST00000454555 MTX3Q5HYI7 312 aa13.2□□□□□ -0.3
LINC00343-203ENST00000454555 MANEALQ5VSG8 457 aa13.2□□□□□ -0.3
LINC00343-203ENST00000454555 LCN8Q6JVE9 175 aa13.2□□□□□ -0.3
LINC00343-203ENST00000454555 MSANTD2Q6P1R3 559 aa13.2□□□□□ -0.3
LINC00343-203ENST00000454555 GPR141Q7Z602 305 aa13.2□□□□□ -0.3
LINC00343-203ENST00000454555 ARHGAP12Q8IWW6 846 aa13.2□□□□□ -0.3
LINC00343-203ENST00000454555 SUSD6Q92537 303 aa13.2□□□□□ -0.3
LINC00343-203ENST00000454555 EDEM1Q92611 657 aa13.2□□□□□ -0.3
LINC00343-203ENST00000454555 RNF34Q969K3 372 aa13.2□□□□□ -0.3
LINC00343-203ENST00000454555 CNDP2Q96KP4 475 aaKnown RBP13.2□□□□□ -0.3
LINC00343-203ENST00000454555 GSTO2Q9H4Y5 243 aa13.2□□□□□ -0.3
LINC00343-203ENST00000454555 CAAP1Q9H8G2 361 aa13.2□□□□□ -0.3
LINC00343-203ENST00000454555 PLGRKTQ9HBL7 147 aa13.2□□□□□ -0.3
LINC00343-203ENST00000454555 ACTR3BQ9P1U1 418 aa13.2□□□□□ -0.3
LINC00343-203ENST00000454555 NEU3Q9UQ49 428 aa13.2□□□□□ -0.3
LINC00343-203ENST00000454555 A0A0J9YVX5 310 aa13.2□□□□□ -0.3
LINC00343-203ENST00000454555 WASH4PA8MWX3 477 aa13.2□□□□□ -0.3
LINC00343-203ENST00000454555 DFFAO00273 331 aa13.2□□□□□ -0.3
LINC00343-203ENST00000454555 TLR5O60602 858 aa13.2□□□□□ -0.3
LINC00343-203ENST00000454555 UMPSP11172 480 aa13.2□□□□□ -0.3
LINC00343-203ENST00000454555 HNRNPLP14866 589 aaKnown RBP eCLIP13.2□□□□□ -0.3
LINC00343-203ENST00000454555 GJA1P17302 382 aa13.2□□□□□ -0.3
LINC00343-203ENST00000454555 KCNA5P22460 613 aa13.2□□□□□ -0.3
LINC00343-203ENST00000454555 FSHRP23945 695 aa13.2□□□□□ -0.3
LINC00343-203ENST00000454555 PSMA4P25789 261 aaKnown RBP13.2□□□□□ -0.3
LINC00343-203ENST00000454555 ATP5C1P36542 298 aaKnown RBP13.2□□□□□ -0.3
LINC00343-203ENST00000454555 CYP4F8P98187 520 aa13.2□□□□□ -0.3
LINC00343-203ENST00000454555 ZNF460Q14592 562 aa13.2□□□□□ -0.3
LINC00343-203ENST00000454555 TEAD2Q15562 447 aa13.2□□□□□ -0.3
LINC00343-203ENST00000454555 TMTC4Q5T4D3 741 aa13.2□□□□□ -0.3
LINC00343-203ENST00000454555 AFMIDQ63HM1 303 aa13.2□□□□□ -0.3
LINC00343-203ENST00000454555 TXNDC8Q6A555 127 aa13.2□□□□□ -0.3
LINC00343-203ENST00000454555 RAB44Q7Z6P3 723 aaPredicted RBP13.2□□□□□ -0.3
LINC00343-203ENST00000454555 TAC4Q86UU9 113 aa13.2□□□□□ -0.3
LINC00343-203ENST00000454555 ZNF354CQ86Y25 554 aa13.2□□□□□ -0.3
LINC00343-203ENST00000454555 FAM156AQ8NDB6 213 aa13.2□□□□□ -0.3
LINC00343-203ENST00000454555 SPATA22Q8NHS9 363 aa13.2□□□□□ -0.3
LINC00343-203ENST00000454555 PNPT1Q8TCS8 783 aaKnown RBP13.2□□□□□ -0.3
LINC00343-203ENST00000454555 C19orf60Q96EN9 201 aa13.2□□□□□ -0.3
LINC00343-203ENST00000454555 SLC46A2Q9BY10 475 aa13.2□□□□□ -0.3
LINC00343-203ENST00000454555 PCDHAC1Q9H158 963 aa13.2□□□□□ -0.3
LINC00343-203ENST00000454555 SLC25A51Q9H1U9 297 aa13.2□□□□□ -0.3
LINC00343-203ENST00000454555 CCSER2Q9H7U1 834 aa13.2□□□□□ -0.3
LINC00343-203ENST00000454555 CDH7Q9ULB5 785 aa13.2□□□□□ -0.3
LINC00343-203ENST00000454555 C2orf78A6NCI8 922 aa13.19□□□□□ -0.3
LINC00343-203ENST00000454555 H3BQ06 376 aaPredicted RBP13.19□□□□□ -0.3
LINC00343-203ENST00000454555 IRAK2O43187 625 aa13.19□□□□□ -0.3
LINC00343-203ENST00000454555 COCHO43405 550 aa13.19□□□□□ -0.3
LINC00343-203ENST00000454555 AKAP10O43572 662 aa13.19□□□□□ -0.3
LINC00343-203ENST00000454555 SNAP91O60641 907 aa13.19□□□□□ -0.3
LINC00343-203ENST00000454555 WISP3O95389 354 aaPredicted RBP13.19□□□□□ -0.3
LINC00343-203ENST00000454555 MT-CYBP00156 380 aaPredicted RBP13.19□□□□□ -0.3
LINC00343-203ENST00000454555 FASP25445 335 aa13.19□□□□□ -0.3
LINC00343-203ENST00000454555 WEE1P30291 646 aa13.19□□□□□ -0.3
LINC00343-203ENST00000454555 SLC7A2P52569 658 aa13.19□□□□□ -0.3
LINC00343-203ENST00000454555 EMP3P54852 163 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms