RNA–Protein interactions for RNA: ENST00000453091.6

RIF1-206, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 8,053 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-206ENST00000453091 PDE12Q6L8Q7 609 aaKnown RBP7.7□□□□□ -1.18
RIF1-206ENST00000453091 ARRDC4Q8NCT1 418 aa7.7□□□□□ -1.18
RIF1-206ENST00000453091 RPL10LQ96L21 214 aaKnown RBP7.7□□□□□ -1.18
RIF1-206ENST00000453091 TCF25Q9BQ70 676 aa7.7□□□□□ -1.18
RIF1-206ENST00000453091 MCMBPQ9BTE3 642 aa7.7□□□□□ -1.18
RIF1-206ENST00000453091 AARSD1Q9BTE6 412 aaKnown RBP7.7□□□□□ -1.18
RIF1-206ENST00000453091 TRPV5Q9NQA5 729 aa7.7□□□□□ -1.18
RIF1-206ENST00000453091 RPRD1BQ9NQG5 326 aaKnown RBP7.7□□□□□ -1.18
RIF1-206ENST00000453091 ANGPT4Q9Y264 503 aa7.7□□□□□ -1.18
RIF1-206ENST00000453091 FGF10O15520 208 aaPredicted RBP7.7□□□□□ -1.18
RIF1-206ENST00000453091 TBX1O43435 398 aa7.7□□□□□ -1.18
RIF1-206ENST00000453091 CLPXO76031 633 aa7.7□□□□□ -1.18
RIF1-206ENST00000453091 PAICSP22234 425 aaKnown RBP7.7□□□□□ -1.18
RIF1-206ENST00000453091 GPD2P43304 727 aa7.7□□□□□ -1.18
RIF1-206ENST00000453091 XIAPP98170 497 aa7.7□□□□□ -1.18
RIF1-206ENST00000453091 HMGCS1Q01581 520 aa7.7□□□□□ -1.18
RIF1-206ENST00000453091 CXorf57Q6NSI4 855 aaKnown RBP7.7□□□□□ -1.18
RIF1-206ENST00000453091 OTOP2Q7RTS6 562 aa7.7□□□□□ -1.18
RIF1-206ENST00000453091 DSG4Q86SJ6 1040 aa7.7□□□□□ -1.18
RIF1-206ENST00000453091 MAML3Q96JK9 1138 aa7.7□□□□□ -1.18
RIF1-206ENST00000453091 PTPN18Q99952 460 aa7.7□□□□□ -1.18
RIF1-206ENST00000453091 INTS7Q9NVH2 962 aaKnown RBP7.7□□□□□ -1.18
RIF1-206ENST00000453091 CLN6Q9NWW5 311 aa7.7□□□□□ -1.18
RIF1-206ENST00000453091 PADI3Q9ULW8 664 aa7.7□□□□□ -1.18
RIF1-206ENST00000453091 NRCAMQ92823 1304 aa7.7□□□□□ -1.18
RIF1-206ENST00000453091 SAP18O00422 153 aaKnown RBP7.7□□□□□ -1.18
RIF1-206ENST00000453091 GCATO75600 419 aa7.7□□□□□ -1.18
RIF1-206ENST00000453091 ANGPTL1O95841 491 aa7.7□□□□□ -1.18
RIF1-206ENST00000453091 IL6P05231 212 aa7.7□□□□□ -1.18
RIF1-206ENST00000453091 ASGR1P07306 291 aa7.7□□□□□ -1.18
RIF1-206ENST00000453091 IDO1P14902 403 aa7.7□□□□□ -1.18
RIF1-206ENST00000453091 HPCAL1P37235 193 aa7.7□□□□□ -1.18
RIF1-206ENST00000453091 CDH12P55289 794 aa7.7□□□□□ -1.18
RIF1-206ENST00000453091 SMAD3P84022 425 aaKnown RBP7.7□□□□□ -1.18
RIF1-206ENST00000453091 DNASE1L3Q13609 305 aa7.7□□□□□ -1.18
RIF1-206ENST00000453091 NFE2Q16621 373 aaPredicted RBP7.7□□□□□ -1.18
RIF1-206ENST00000453091 RABL3Q5HYI8 236 aa7.7□□□□□ -1.18
RIF1-206ENST00000453091 PLPPR4Q7Z2D5 763 aa7.7□□□□□ -1.18
RIF1-206ENST00000453091 KLHL32Q96NJ5 620 aa7.7□□□□□ -1.18
RIF1-206ENST00000453091 MIPEPQ99797 713 aa7.7□□□□□ -1.18
RIF1-206ENST00000453091 BRD9Q9H8M2 597 aa7.7□□□□□ -1.18
RIF1-206ENST00000453091 PCDHGC3Q9UN70 934 aa7.7□□□□□ -1.18
RIF1-206ENST00000453091 SESN1Q9Y6P5 492 aa7.7□□□□□ -1.18
RIF1-206ENST00000453091 NID2Q14112 1375 aa7.7□□□□□ -1.18
RIF1-206ENST00000453091 ITSN1Q15811 1721 aa7.7□□□□□ -1.18
RIF1-206ENST00000453091 NOS1APO75052 506 aaPredicted RBP7.7□□□□□ -1.18
RIF1-206ENST00000453091 EFCAB14O75071 495 aa7.7□□□□□ -1.18
RIF1-206ENST00000453091 RPP40O75818 363 aaKnown RBP7.7□□□□□ -1.18
RIF1-206ENST00000453091 MLYCDO95822 493 aa7.7□□□□□ -1.18
RIF1-206ENST00000453091 HOXC6P09630 235 aa7.7□□□□□ -1.18
RIF1-206ENST00000453091 PTP4A2Q12974 167 aa7.7□□□□□ -1.18
RIF1-206ENST00000453091 KCNA10Q16322 511 aa7.7□□□□□ -1.18
RIF1-206ENST00000453091 SLC10A6Q3KNW5 377 aa7.7□□□□□ -1.18
RIF1-206ENST00000453091 PROSER1Q86XN7 944 aa7.7□□□□□ -1.18
RIF1-206ENST00000453091 PIGKQ92643 395 aa7.7□□□□□ -1.18
RIF1-206ENST00000453091 ARMC5Q96C12 935 aa7.7□□□□□ -1.18
RIF1-206ENST00000453091 TXNRD2Q9NNW7 524 aa7.7□□□□□ -1.18
RIF1-206ENST00000453091 UCKL1Q9NWZ5 548 aa7.7□□□□□ -1.18
RIF1-206ENST00000453091 OAZ3Q9UMX2 235 aa7.7□□□□□ -1.18
RIF1-206ENST00000453091 KNDC1Q76NI1 1749 aa7.69□□□□□ -1.18
RIF1-206ENST00000453091 RTN3O95197 1032 aaPredicted RBP7.69□□□□□ -1.18
RIF1-206ENST00000453091 FESP07332 822 aa7.69□□□□□ -1.18
RIF1-206ENST00000453091 CDK9P50750 372 aaKnown RBP7.69□□□□□ -1.18
RIF1-206ENST00000453091 GPR153Q6NV75 609 aa7.69□□□□□ -1.18
RIF1-206ENST00000453091 RGMBQ6NW40 437 aa7.69□□□□□ -1.18
RIF1-206ENST00000453091 TBC1D21Q8IYX1 336 aa7.69□□□□□ -1.18
RIF1-206ENST00000453091 KLHL23Q8NBE8 558 aa7.69□□□□□ -1.18
RIF1-206ENST00000453091 GAL3ST1Q99999 423 aa7.69□□□□□ -1.18
RIF1-206ENST00000453091 GNPTGQ9UJJ9 305 aa7.69□□□□□ -1.18
RIF1-206ENST00000453091 SNX6Q9UNH7 406 aa7.69□□□□□ -1.18
RIF1-206ENST00000453091 KRT87PA6NCN2 255 aa7.69□□□□□ -1.18
RIF1-206ENST00000453091 LRRC14BA6NHZ5 514 aa7.69□□□□□ -1.18
RIF1-206ENST00000453091 SNTNA6NMZ2 147 aa7.69□□□□□ -1.18
RIF1-206ENST00000453091 NEDD8-MDP1E9PL57 170 aa7.69□□□□□ -1.18
RIF1-206ENST00000453091 NFKBIEO00221 500 aa7.69□□□□□ -1.18
RIF1-206ENST00000453091 SSNA1O43805 119 aa7.69□□□□□ -1.18
RIF1-206ENST00000453091 DLX3O60479 287 aa7.69□□□□□ -1.18
RIF1-206ENST00000453091 OTCP00480 354 aa7.69□□□□□ -1.18
RIF1-206ENST00000453091 FCER2P06734 321 aa7.69□□□□□ -1.18
RIF1-206ENST00000453091 GABRR2P28476 465 aa7.69□□□□□ -1.18
RIF1-206ENST00000453091 TKTP29401 623 aaKnown RBP7.69□□□□□ -1.18
RIF1-206ENST00000453091 CAPGP40121 348 aa7.69□□□□□ -1.18
RIF1-206ENST00000453091 NUDT6P53370 316 aa7.69□□□□□ -1.18
RIF1-206ENST00000453091 TLR1Q15399 786 aa7.69□□□□□ -1.18
RIF1-206ENST00000453091 MEP1AQ16819 746 aa7.69□□□□□ -1.18
RIF1-206ENST00000453091 MYDGFQ969H8 173 aa7.69□□□□□ -1.18
RIF1-206ENST00000453091 ASB2Q96Q27 587 aa7.69□□□□□ -1.18
RIF1-206ENST00000453091 AAASQ9NRG9 546 aa7.69□□□□□ -1.18
RIF1-206ENST00000453091 ZFP37Q9Y6Q3 630 aaPredicted RBP7.69□□□□□ -1.18
RIF1-206ENST00000453091 A0A0G2JN53 185 aa7.69□□□□□ -1.18
RIF1-206ENST00000453091 OR2AG2A6NM03 316 aa7.69□□□□□ -1.18
RIF1-206ENST00000453091 BUD31P41223 144 aaPredicted RBP7.69□□□□□ -1.18
RIF1-206ENST00000453091 COPZ1P61923 177 aa7.69□□□□□ -1.18
RIF1-206ENST00000453091 PITX1P78337 314 aaPredicted RBP7.69□□□□□ -1.18
RIF1-206ENST00000453091 KCNJ11Q14654 390 aa7.69□□□□□ -1.18
RIF1-206ENST00000453091 PCBP2Q15366 365 aaKnown RBP eCLIP7.69□□□□□ -1.18
RIF1-206ENST00000453091 TSTD2Q5T7W7 516 aa7.69□□□□□ -1.18
RIF1-206ENST00000453091 ZDHHC14Q8IZN3 488 aa7.69□□□□□ -1.18
RIF1-206ENST00000453091 FAM110BQ8TC76 370 aa7.69□□□□□ -1.18
RIF1-206ENST00000453091 PCED1BQ96HM7 432 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms