RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 KIR2DS5A0A0G2JLQ3 304 aa15.09■□□□□ 0.01
CHD3-205ENST00000449744 A0A0G2JNG1 304 aa15.09■□□□□ 0.01
CHD3-205ENST00000449744 IGHV5-10-1A0A0J9YXX1 117 aa15.09■□□□□ 0.01
CHD3-205ENST00000449744 OR5K4A6NMS3 321 aa15.09■□□□□ 0.01
CHD3-205ENST00000449744 KIR2DS3K7RE56 304 aa15.09■□□□□ 0.01
CHD3-205ENST00000449744 HGSO14964 777 aaPredicted RBP15.09■□□□□ 0.01
CHD3-205ENST00000449744 DUX1O43812 170 aa15.09■□□□□ 0.01
CHD3-205ENST00000449744 VEGFDO43915 354 aa15.09■□□□□ 0.01
CHD3-205ENST00000449744 F3P13726 295 aa15.09■□□□□ 0.01
CHD3-205ENST00000449744 HLA-DPA1P20036 260 aa15.09■□□□□ 0.01
CHD3-205ENST00000449744 RBL1P28749 1068 aa15.09■□□□□ 0.01
CHD3-205ENST00000449744 HMGCLP35914 325 aa15.09■□□□□ 0.01
CHD3-205ENST00000449744 ETV5P41161 510 aa15.09■□□□□ 0.01
CHD3-205ENST00000449744 CHRNA4P43681 627 aa15.09■□□□□ 0.01
CHD3-205ENST00000449744 LIMK2P53671 638 aa15.09■□□□□ 0.01
CHD3-205ENST00000449744 GEMP55040 296 aa15.09■□□□□ 0.01
CHD3-205ENST00000449744 OTUD4Q01804 1114 aaKnown RBP15.09■□□□□ 0.01
CHD3-205ENST00000449744 NFATC2Q13469 925 aa15.09■□□□□ 0.01
CHD3-205ENST00000449744 SQSTM1Q13501 440 aa15.09■□□□□ 0.01
CHD3-205ENST00000449744 GTF2H3Q13889 308 aa15.09■□□□□ 0.01
CHD3-205ENST00000449744 KIR2DS5Q14953 304 aa15.09■□□□□ 0.01
CHD3-205ENST00000449744 INSCQ1MX18 579 aa15.09■□□□□ 0.01
CHD3-205ENST00000449744 SIRPB2Q5JXA9 342 aa15.09■□□□□ 0.01
CHD3-205ENST00000449744 ZDHHC20Q5W0Z9 365 aa15.09■□□□□ 0.01
CHD3-205ENST00000449744 ZNF574Q6ZN55 896 aaPredicted RBP15.09■□□□□ 0.01
CHD3-205ENST00000449744 CCDC81Q6ZN84 652 aa15.09■□□□□ 0.01
CHD3-205ENST00000449744 GLT6D1Q7Z4J2 308 aa15.09■□□□□ 0.01
CHD3-205ENST00000449744 LRRTM4Q86VH4 590 aa15.09■□□□□ 0.01
CHD3-205ENST00000449744 CDKL3Q8IVW4 592 aaPredicted RBP15.09■□□□□ 0.01
CHD3-205ENST00000449744 TXLNBQ8N3L3 684 aa15.09■□□□□ 0.01
CHD3-205ENST00000449744 AVL9Q8NBF6 648 aa15.09■□□□□ 0.01
CHD3-205ENST00000449744 RCBTB1Q8NDN9 531 aa15.09■□□□□ 0.01
CHD3-205ENST00000449744 ACRBPQ8NEB7 543 aa15.09■□□□□ 0.01
CHD3-205ENST00000449744 OR4D9Q8NGE8 314 aa15.09■□□□□ 0.01
CHD3-205ENST00000449744 GDAP1Q8TB36 358 aa15.09■□□□□ 0.01
CHD3-205ENST00000449744 ACTL9Q8TC94 416 aa15.09■□□□□ 0.01
CHD3-205ENST00000449744 BLOC1S5Q8TDH9 187 aa15.09■□□□□ 0.01
CHD3-205ENST00000449744 USP7Q93009 1102 aa15.09■□□□□ 0.01
CHD3-205ENST00000449744 OXNAD1Q96HP4 312 aaPredicted RBP15.09■□□□□ 0.01
CHD3-205ENST00000449744 MRGPRX2Q96LB1 330 aa15.09■□□□□ 0.01
CHD3-205ENST00000449744 BAG1Q99933 345 aaPredicted RBP15.09■□□□□ 0.01
CHD3-205ENST00000449744 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.09■□□□□ 0.01
CHD3-205ENST00000449744 OSBPL8Q9BZF1 889 aa15.09■□□□□ 0.01
CHD3-205ENST00000449744 SARS2Q9NP81 518 aaKnown RBP15.09■□□□□ 0.01
CHD3-205ENST00000449744 KLC4Q9NSK0 619 aa15.09■□□□□ 0.01
CHD3-205ENST00000449744 REXO2Q9Y3B8 237 aaKnown RBP15.09■□□□□ 0.01
CHD3-205ENST00000449744 PTPRQQ9UMZ3 2332 aa15.09■□□□□ 0.01
CHD3-205ENST00000449744 ZFC3H1O60293 1989 aaKnown RBP15.08■□□□□ 0
CHD3-205ENST00000449744 PRAMEF33A0A0G2JMD5 474 aa15.08■□□□□ 0
CHD3-205ENST00000449744 KMOO15229 486 aa15.08■□□□□ 0
CHD3-205ENST00000449744 ATXN7O15265 892 aaPredicted RBP15.08■□□□□ 0
CHD3-205ENST00000449744 PRAMEF10O60809 474 aa15.08■□□□□ 0
CHD3-205ENST00000449744 MTX2O75431 263 aa15.08■□□□□ 0
CHD3-205ENST00000449744 ANXA9O76027 345 aa15.08■□□□□ 0
CHD3-205ENST00000449744 STK10O94804 968 aaKnown RBP15.08■□□□□ 0
CHD3-205ENST00000449744 CDK14O94921 469 aa15.08■□□□□ 0
CHD3-205ENST00000449744 TJP3O95049 919 aa15.08■□□□□ 0
CHD3-205ENST00000449744 PTMAP06454 111 aaKnown RBP15.08■□□□□ 0
CHD3-205ENST00000449744 MPSTP25325 297 aa15.08■□□□□ 0
CHD3-205ENST00000449744 CSTF2P33240 577 aaKnown RBP eCLIP15.08■□□□□ 0
CHD3-205ENST00000449744 SPAM1P38567 509 aa15.08■□□□□ 0
CHD3-205ENST00000449744 CLCNKAP51800 687 aa15.08■□□□□ 0
CHD3-205ENST00000449744 EIF3EP60228 445 aaKnown RBP15.08■□□□□ 0
CHD3-205ENST00000449744 RHDQ02161 417 aa15.08■□□□□ 0
CHD3-205ENST00000449744 PRPSAP1Q14558 356 aa15.08■□□□□ 0
CHD3-205ENST00000449744 SLC1A5Q15758 541 aa15.08■□□□□ 0
CHD3-205ENST00000449744 PLA2G4EQ3MJ16 856 aa15.08■□□□□ 0
CHD3-205ENST00000449744 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.08■□□□□ 0
CHD3-205ENST00000449744 TMEM71Q6P5X7 295 aa15.08■□□□□ 0
CHD3-205ENST00000449744 GAS2L3Q86XJ1 694 aa15.08■□□□□ 0
CHD3-205ENST00000449744 CCDC112Q8NEF3 446 aa15.08■□□□□ 0
CHD3-205ENST00000449744 TTC25Q96NG3 672 aa15.08■□□□□ 0
CHD3-205ENST00000449744 VPS35Q96QK1 796 aa15.08■□□□□ 0
CHD3-205ENST00000449744 CCNL2Q96S94 520 aaPredicted RBP15.08■□□□□ 0
CHD3-205ENST00000449744 LACRTQ9GZZ8 138 aa15.08■□□□□ 0
CHD3-205ENST00000449744 C10orf88Q9H8K7 445 aa15.08■□□□□ 0
CHD3-205ENST00000449744 PRDM8Q9NQV8 689 aa15.08■□□□□ 0
CHD3-205ENST00000449744 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.08■□□□□ 0
CHD3-205ENST00000449744 ACSL6Q9UKU0 697 aa15.08■□□□□ 0
CHD3-205ENST00000449744 AMFRQ9UKV5 643 aa15.08■□□□□ 0
CHD3-205ENST00000449744 PKP3Q9Y446 797 aa15.08■□□□□ 0
CHD3-205ENST00000449744 PCDHB11Q9Y5F2 797 aa15.08■□□□□ 0
CHD3-205ENST00000449744 ADGRG1Q9Y653 693 aa15.08■□□□□ 0
CHD3-205ENST00000449744 CELSR3Q9NYQ7 3312 aa15.08■□□□□ 0
CHD3-205ENST00000449744 ITPR1Q14643 2758 aa15.07■□□□□ 0
CHD3-205ENST00000449744 CHUKO15111 745 aa15.07■□□□□ 0
CHD3-205ENST00000449744 PJA2O43164 708 aa15.07■□□□□ 0
CHD3-205ENST00000449744 RBP3P10745 1247 aa15.07■□□□□ 0
CHD3-205ENST00000449744 THRAP10827 490 aa15.07■□□□□ 0
CHD3-205ENST00000449744 LIPCP11150 499 aa15.07■□□□□ 0
CHD3-205ENST00000449744 CCL4P13236 92 aa15.07■□□□□ 0
CHD3-205ENST00000449744 ZNF7P17097 686 aaPredicted RBP15.07■□□□□ 0
CHD3-205ENST00000449744 CSF2RBP32927 897 aa15.07■□□□□ 0
CHD3-205ENST00000449744 PTPN7P35236 360 aa15.07■□□□□ 0
CHD3-205ENST00000449744 MAPK9P45984 424 aa15.07■□□□□ 0
CHD3-205ENST00000449744 KIF5AQ12840 1032 aa15.07■□□□□ 0
CHD3-205ENST00000449744 ATP13A5Q4VNC0 1218 aa15.07■□□□□ 0
CHD3-205ENST00000449744 TAF1BQ53T94 588 aaPredicted RBP15.07■□□□□ 0
CHD3-205ENST00000449744 DARS2Q6PI48 645 aaKnown RBP15.07■□□□□ 0
CHD3-205ENST00000449744 TRIM48Q8IWZ4 208 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms