RNA–Protein interactions for RNA: ENST00000449389.1

SRRT-205, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-205ENST00000449389 SPATA22Q8NHS9 363 aa10.68□□□□□ -0.7
SRRT-205ENST00000449389 ART4Q93070 314 aa10.68□□□□□ -0.7
SRRT-205ENST00000449389 KLC4Q9NSK0 619 aa10.68□□□□□ -0.7
SRRT-205ENST00000449389 PCDHGA4Q9Y5G9 962 aa10.68□□□□□ -0.7
SRRT-205ENST00000449389 ADGRG1Q9Y653 693 aa10.68□□□□□ -0.7
SRRT-205ENST00000449389 SPTA1P02549 2419 aa10.68□□□□□ -0.7
SRRT-205ENST00000449389 FLNBO75369 2602 aaKnown RBP10.67□□□□□ -0.7
SRRT-205ENST00000449389 LILRA5A6NI73 299 aa10.67□□□□□ -0.7
SRRT-205ENST00000449389 EFCAB7A8K855 629 aa10.67□□□□□ -0.7
SRRT-205ENST00000449389 CHUKO15111 745 aa10.67□□□□□ -0.7
SRRT-205ENST00000449389 VEGFDO43915 354 aa10.67□□□□□ -0.7
SRRT-205ENST00000449389 PMPCBO75439 489 aa10.67□□□□□ -0.7
SRRT-205ENST00000449389 PECAM1P16284 738 aaPredicted RBP10.67□□□□□ -0.7
SRRT-205ENST00000449389 BPIP17213 487 aa10.67□□□□□ -0.7
SRRT-205ENST00000449389 MAGEA1P43355 309 aa10.67□□□□□ -0.7
SRRT-205ENST00000449389 TNNT3P45378 269 aaPredicted RBP10.67□□□□□ -0.7
SRRT-205ENST00000449389 UBE2IP63279 158 aaKnown RBP10.67□□□□□ -0.7
SRRT-205ENST00000449389 INSCQ1MX18 579 aa10.67□□□□□ -0.7
SRRT-205ENST00000449389 TFDP3Q5H9I0 405 aa10.67□□□□□ -0.7
SRRT-205ENST00000449389 FAM182AQ5T1J6 154 aa10.67□□□□□ -0.7
SRRT-205ENST00000449389 DCAF12Q5T6F0 453 aa10.67□□□□□ -0.7
SRRT-205ENST00000449389 SARM1Q6SZW1 724 aa10.67□□□□□ -0.7
SRRT-205ENST00000449389 CRTC3Q6UUV7 619 aa10.67□□□□□ -0.7
SRRT-205ENST00000449389 B4GALNT4Q76KP1 1039 aa10.67□□□□□ -0.7
SRRT-205ENST00000449389 ARHGAP22Q7Z5H3 698 aa10.67□□□□□ -0.7
SRRT-205ENST00000449389 ADGRG6Q86SQ4 1221 aa10.67□□□□□ -0.7
SRRT-205ENST00000449389 LRRTM4Q86VH4 590 aa10.67□□□□□ -0.7
SRRT-205ENST00000449389 FAM129CQ86XR2 697 aa10.67□□□□□ -0.7
SRRT-205ENST00000449389 KATNAL2Q8IYT4 538 aa10.67□□□□□ -0.7
SRRT-205ENST00000449389 NCSTNQ92542 709 aa10.67□□□□□ -0.7
SRRT-205ENST00000449389 P3H4Q92791 437 aa10.67□□□□□ -0.7
SRRT-205ENST00000449389 NKD1Q969G9 470 aa10.67□□□□□ -0.7
SRRT-205ENST00000449389 PMEPA1Q969W9 287 aa10.67□□□□□ -0.7
SRRT-205ENST00000449389 PLEKHG4BQ96PX9 1271 aa10.67□□□□□ -0.7
SRRT-205ENST00000449389 TEFMQ96QE5 360 aaKnown RBP10.67□□□□□ -0.7
SRRT-205ENST00000449389 VPS35Q96QK1 796 aa10.67□□□□□ -0.7
SRRT-205ENST00000449389 VAT1Q99536 393 aa10.67□□□□□ -0.7
SRRT-205ENST00000449389 TIMM29Q9BSF4 260 aa10.67□□□□□ -0.7
SRRT-205ENST00000449389 OSGEPL1Q9H4B0 414 aa10.67□□□□□ -0.7
SRRT-205ENST00000449389 TRABDQ9H4I3 376 aa10.67□□□□□ -0.7
SRRT-205ENST00000449389 ARFGAP3Q9NP61 516 aa10.67□□□□□ -0.7
SRRT-205ENST00000449389 LUC7LQ9NQ29 371 aaKnown RBP10.67□□□□□ -0.7
SRRT-205ENST00000449389 PRDM8Q9NQV8 689 aa10.67□□□□□ -0.7
SRRT-205ENST00000449389 OCIAD1Q9NX40 245 aa10.67□□□□□ -0.7
SRRT-205ENST00000449389 SLC39A1Q9NY26 324 aa10.67□□□□□ -0.7
SRRT-205ENST00000449389 SAE1Q9UBE0 346 aaPredicted RBP10.67□□□□□ -0.7
SRRT-205ENST00000449389 CPNE7Q9UBL6 633 aa10.67□□□□□ -0.7
SRRT-205ENST00000449389 FAM153AQ9UHL3 310 aa10.67□□□□□ -0.7
SRRT-205ENST00000449389 SPO11Q9Y5K1 396 aa10.67□□□□□ -0.7
SRRT-205ENST00000449389 B3GALT1Q9Y5Z6 326 aa10.67□□□□□ -0.7
SRRT-205ENST00000449389 ALG6Q9Y672 507 aa10.67□□□□□ -0.7
SRRT-205ENST00000449389 TLN1Q9Y490 2541 aaKnown RBP10.66□□□□□ -0.7
SRRT-205ENST00000449389 hCG_1818297A0A087WSY0 165 aa10.66□□□□□ -0.7
SRRT-205ENST00000449389 LOC285095A0A1B0GVY8 99 aa10.66□□□□□ -0.7
SRRT-205ENST00000449389 B8ZZF3 427 aa10.66□□□□□ -0.7
SRRT-205ENST00000449389 KMOO15229 486 aa10.66□□□□□ -0.7
SRRT-205ENST00000449389 CDK14O94921 469 aa10.66□□□□□ -0.7
SRRT-205ENST00000449389 ZRANB2O95218 330 aaKnown RBP eCLIP10.66□□□□□ -0.7
SRRT-205ENST00000449389 LCA5LO95447 670 aa10.66□□□□□ -0.7
SRRT-205ENST00000449389 EPOP01588 193 aa10.66□□□□□ -0.7
SRRT-205ENST00000449389 ZNF7P17097 686 aaPredicted RBP10.66□□□□□ -0.7
SRRT-205ENST00000449389 XRCC1P18887 633 aaPredicted RBP10.66□□□□□ -0.7
SRRT-205ENST00000449389 NFKB1P19838 968 aa10.66□□□□□ -0.7
SRRT-205ENST00000449389 CD68P34810 354 aaPredicted RBP10.66□□□□□ -0.7
SRRT-205ENST00000449389 UGT1A3P35503 534 aa10.66□□□□□ -0.7
SRRT-205ENST00000449389 HMGCLP35914 325 aa10.66□□□□□ -0.7
SRRT-205ENST00000449389 MAPK9P45984 424 aa10.66□□□□□ -0.7
SRRT-205ENST00000449389 ARSDP51689 593 aa10.66□□□□□ -0.7
SRRT-205ENST00000449389 WNT3AP56704 352 aa10.66□□□□□ -0.7
SRRT-205ENST00000449389 MC2RQ01718 297 aa10.66□□□□□ -0.7
SRRT-205ENST00000449389 WASHC5Q12768 1159 aa10.66□□□□□ -0.7
SRRT-205ENST00000449389 SNAP47Q5SQN1 464 aa10.66□□□□□ -0.7
SRRT-205ENST00000449389 ZNF648Q5T619 568 aaPredicted RBP10.66□□□□□ -0.7
SRRT-205ENST00000449389 ZDHHC20Q5W0Z9 365 aa10.66□□□□□ -0.7
SRRT-205ENST00000449389 KAZNQ674X7 775 aa10.66□□□□□ -0.7
SRRT-205ENST00000449389 C11orf63Q6NUN7 778 aa10.66□□□□□ -0.7
SRRT-205ENST00000449389 KDELC1Q6UW63 502 aa10.66□□□□□ -0.7
SRRT-205ENST00000449389 CCDC50Q8IVM0 306 aa10.66□□□□□ -0.7
SRRT-205ENST00000449389 RCOR2Q8IZ40 523 aa10.66□□□□□ -0.7
SRRT-205ENST00000449389 IL22RA1Q8N6P7 574 aa10.66□□□□□ -0.7
SRRT-205ENST00000449389 BMPERQ8N8U9 685 aa10.66□□□□□ -0.7
SRRT-205ENST00000449389 TC2NQ8N9U0 490 aa10.66□□□□□ -0.7
SRRT-205ENST00000449389 DTX3LQ8TDB6 740 aa10.66□□□□□ -0.7
SRRT-205ENST00000449389 JPH3Q8WXH2 748 aaPredicted RBP10.66□□□□□ -0.7
SRRT-205ENST00000449389 RBM41Q96IZ5 413 aaKnown RBP10.66□□□□□ -0.7
SRRT-205ENST00000449389 QKIQ96PU8 341 aaKnown RBP eCLIP10.66□□□□□ -0.7
SRRT-205ENST00000449389 ARHGAP9Q9BRR9 750 aa10.66□□□□□ -0.7
SRRT-205ENST00000449389 ZPBPQ9BS86 351 aa10.66□□□□□ -0.7
SRRT-205ENST00000449389 TRIM5Q9C035 493 aa10.66□□□□□ -0.7
SRRT-205ENST00000449389 UCK1Q9HA47 277 aa10.66□□□□□ -0.7
SRRT-205ENST00000449389 UBP1Q9NZI7 540 aa10.66□□□□□ -0.7
SRRT-205ENST00000449389 HACD3Q9P035 362 aa10.66□□□□□ -0.7
SRRT-205ENST00000449389 KLHL8Q9P2G9 620 aaPredicted RBP10.66□□□□□ -0.7
SRRT-205ENST00000449389 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.66□□□□□ -0.7
SRRT-205ENST00000449389 TENM4Q6N022 2769 aa10.66□□□□□ -0.7
SRRT-205ENST00000449389 ZFC3H1O60293 1989 aaKnown RBP10.66□□□□□ -0.7
SRRT-205ENST00000449389 MN1Q10571 1320 aaPredicted RBP10.65□□□□□ -0.7
SRRT-205ENST00000449389 PRR19A6NJB7 356 aa10.65□□□□□ -0.7
SRRT-205ENST00000449389 A8MU76 341 aa10.65□□□□□ -0.7
SRRT-205ENST00000449389 PDZK1P1A8MUH7 402 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms