RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 ARHGEF7Q14155 803 aa10.48□□□□□ -0.73
VIPAS39-203ENST00000448935 EIF4HQ15056 248 aaKnown RBP10.48□□□□□ -0.73
VIPAS39-203ENST00000448935 CRY1Q16526 586 aa10.48□□□□□ -0.73
VIPAS39-203ENST00000448935 HSF5Q4G112 596 aaPredicted RBP10.48□□□□□ -0.73
VIPAS39-203ENST00000448935 PTRHD1Q6GMV3 140 aaKnown RBP10.48□□□□□ -0.73
VIPAS39-203ENST00000448935 TXNDC11Q6PKC3 985 aa10.48□□□□□ -0.73
VIPAS39-203ENST00000448935 PAQR3Q6TCH7 311 aa10.48□□□□□ -0.73
VIPAS39-203ENST00000448935 CRTC1Q6UUV9 634 aa10.48□□□□□ -0.73
VIPAS39-203ENST00000448935 FRMD7Q6ZUT3 714 aa10.48□□□□□ -0.73
VIPAS39-203ENST00000448935 GPR149Q86SP6 731 aa10.48□□□□□ -0.73
VIPAS39-203ENST00000448935 SERPINA9Q86WD7 417 aa10.48□□□□□ -0.73
VIPAS39-203ENST00000448935 ARHGAP24Q8N264 748 aa10.48□□□□□ -0.73
VIPAS39-203ENST00000448935 PNPLA1Q8N8W4 532 aa10.48□□□□□ -0.73
VIPAS39-203ENST00000448935 OR2A12Q8NGT7 310 aa10.48□□□□□ -0.73
VIPAS39-203ENST00000448935 EID2BQ96D98 161 aa10.48□□□□□ -0.73
VIPAS39-203ENST00000448935 PDLIM5Q96HC4 596 aaKnown RBP10.48□□□□□ -0.73
VIPAS39-203ENST00000448935 EBF4Q9BQW3 602 aa10.48□□□□□ -0.73
VIPAS39-203ENST00000448935 CCDC28BQ9BUN5 200 aa10.48□□□□□ -0.73
VIPAS39-203ENST00000448935 ERVK-6Q9BXR3 956 aa10.48□□□□□ -0.73
VIPAS39-203ENST00000448935 PBX4Q9BYU1 374 aa10.48□□□□□ -0.73
VIPAS39-203ENST00000448935 UNKQ9C0B0 810 aaKnown RBP10.48□□□□□ -0.73
VIPAS39-203ENST00000448935 CIPCQ9C0C6 399 aa10.48□□□□□ -0.73
VIPAS39-203ENST00000448935 NKX2-4Q9H2Z4 354 aa10.48□□□□□ -0.73
VIPAS39-203ENST00000448935 BRD9Q9H8M2 597 aa10.48□□□□□ -0.73
VIPAS39-203ENST00000448935 CERS4Q9HA82 394 aa10.48□□□□□ -0.73
VIPAS39-203ENST00000448935 TRPV4Q9HBA0 871 aa10.48□□□□□ -0.73
VIPAS39-203ENST00000448935 IL26Q9NPH9 171 aa10.48□□□□□ -0.73
VIPAS39-203ENST00000448935 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.48□□□□□ -0.73
VIPAS39-203ENST00000448935 PKD2L2Q9NZM6 624 aa10.48□□□□□ -0.73
VIPAS39-203ENST00000448935 RNF112Q9ULX5 631 aa10.48□□□□□ -0.73
VIPAS39-203ENST00000448935 PCDHGA11Q9Y5H2 935 aa10.48□□□□□ -0.73
VIPAS39-203ENST00000448935 TSPAN11A1L157 253 aa10.47□□□□□ -0.73
VIPAS39-203ENST00000448935 AGAP14A8MT82 685 aa10.47□□□□□ -0.73
VIPAS39-203ENST00000448935 CAPN14A8MX76 684 aa10.47□□□□□ -0.73
VIPAS39-203ENST00000448935 CISD3P0C7P0 127 aa10.47□□□□□ -0.73
VIPAS39-203ENST00000448935 XPAP23025 273 aaPredicted RBP10.47□□□□□ -0.73
VIPAS39-203ENST00000448935 MPSTP25325 297 aa10.47□□□□□ -0.73
VIPAS39-203ENST00000448935 ACRV1P26436 265 aa10.47□□□□□ -0.73
VIPAS39-203ENST00000448935 RGS4P49798 205 aa10.47□□□□□ -0.73
VIPAS39-203ENST00000448935 SATB1Q01826 763 aa10.47□□□□□ -0.73
VIPAS39-203ENST00000448935 TUBB3Q13509 450 aa10.47□□□□□ -0.73
VIPAS39-203ENST00000448935 PTPRRQ15256 657 aa10.47□□□□□ -0.73
VIPAS39-203ENST00000448935 GEN1Q17RS7 908 aa10.47□□□□□ -0.73
VIPAS39-203ENST00000448935 TTC31Q49AM3 519 aaPredicted RBP10.47□□□□□ -0.73
VIPAS39-203ENST00000448935 PREPLQ4J6C6 727 aaPredicted RBP10.47□□□□□ -0.73
VIPAS39-203ENST00000448935 FAM78AQ5JUQ0 283 aa10.47□□□□□ -0.73
VIPAS39-203ENST00000448935 CTSL3PQ5NE16 218 aa10.47□□□□□ -0.73
VIPAS39-203ENST00000448935 ZNF678Q5SXM1 525 aa10.47□□□□□ -0.73
VIPAS39-203ENST00000448935 RARS2Q5T160 578 aaKnown RBP10.47□□□□□ -0.73
VIPAS39-203ENST00000448935 LRRC66Q68CR7 880 aa10.47□□□□□ -0.73
VIPAS39-203ENST00000448935 CYB5D1Q6P9G0 228 aa10.47□□□□□ -0.73
VIPAS39-203ENST00000448935 TMEM184AQ6ZMB5 413 aa10.47□□□□□ -0.73
VIPAS39-203ENST00000448935 ZSWIM9Q86XI8 627 aa10.47□□□□□ -0.73
VIPAS39-203ENST00000448935 SUGP1Q8IWZ8 645 aaKnown RBP10.47□□□□□ -0.73
VIPAS39-203ENST00000448935 LSMEM2Q8N112 164 aa10.47□□□□□ -0.73
VIPAS39-203ENST00000448935 CD200R1Q8TD46 325 aa10.47□□□□□ -0.73
VIPAS39-203ENST00000448935 DTX3LQ8TDB6 740 aa10.47□□□□□ -0.73
VIPAS39-203ENST00000448935 GDPD5Q8WTR4 605 aa10.47□□□□□ -0.73
VIPAS39-203ENST00000448935 FRS2Q8WU20 508 aa10.47□□□□□ -0.73
VIPAS39-203ENST00000448935 FGF13Q92913 245 aa10.47□□□□□ -0.73
VIPAS39-203ENST00000448935 PTERQ96BW5 349 aa10.47□□□□□ -0.73
VIPAS39-203ENST00000448935 SLC7A6OSQ96CW6 309 aaPredicted RBP10.47□□□□□ -0.73
VIPAS39-203ENST00000448935 MRPL38Q96DV4 380 aaKnown RBP10.47□□□□□ -0.73
VIPAS39-203ENST00000448935 PHF21BQ96EK2 531 aa10.47□□□□□ -0.73
VIPAS39-203ENST00000448935 PTCD3Q96EY7 689 aaKnown RBP10.47□□□□□ -0.73
VIPAS39-203ENST00000448935 MRGPRX3Q96LB0 322 aa10.47□□□□□ -0.73
VIPAS39-203ENST00000448935 KLHL32Q96NJ5 620 aa10.47□□□□□ -0.73
VIPAS39-203ENST00000448935 ATOH8Q96SQ7 321 aa10.47□□□□□ -0.73
VIPAS39-203ENST00000448935 BTBD10Q9BSF8 475 aa10.47□□□□□ -0.73
VIPAS39-203ENST00000448935 CCDC106Q9BWC9 280 aa10.47□□□□□ -0.73
VIPAS39-203ENST00000448935 CYP4F12Q9HCS2 524 aa10.47□□□□□ -0.73
VIPAS39-203ENST00000448935 TCF7L2Q9NQB0 619 aa10.47□□□□□ -0.73
VIPAS39-203ENST00000448935 ARL8BQ9NVJ2 186 aa10.47□□□□□ -0.73
VIPAS39-203ENST00000448935 DEC1Q9P2X7 70 aa10.47□□□□□ -0.73
VIPAS39-203ENST00000448935 DKK3Q9UBP4 350 aa10.47□□□□□ -0.73
VIPAS39-203ENST00000448935 IL36AQ9UHA7 158 aa10.47□□□□□ -0.73
VIPAS39-203ENST00000448935 TAGLN3Q9UI15 199 aa10.47□□□□□ -0.73
VIPAS39-203ENST00000448935 PLA2G4CQ9UP65 541 aa10.47□□□□□ -0.73
VIPAS39-203ENST00000448935 CDYLQ9Y232 598 aa10.47□□□□□ -0.73
VIPAS39-203ENST00000448935 MED16Q9Y2X0 877 aa10.47□□□□□ -0.73
VIPAS39-203ENST00000448935 DHRS7Q9Y394 339 aa10.47□□□□□ -0.73
VIPAS39-203ENST00000448935 RGSL1A5PLK6 1076 aa10.47□□□□□ -0.73
VIPAS39-203ENST00000448935 NEMP2A6NFY4 417 aa10.47□□□□□ -0.73
VIPAS39-203ENST00000448935 HEPACAM2A8MVW5 462 aa10.47□□□□□ -0.73
VIPAS39-203ENST00000448935 SPECC1L-ADORA2AF8WAN1 911 aa10.47□□□□□ -0.73
VIPAS39-203ENST00000448935 STX16-NPEPL1H3BU86 382 aa10.47□□□□□ -0.73
VIPAS39-203ENST00000448935 GAPDHSO14556 408 aaPredicted RBP10.47□□□□□ -0.73
VIPAS39-203ENST00000448935 STX16O14662 325 aa10.47□□□□□ -0.73
VIPAS39-203ENST00000448935 SLC22A2O15244 555 aa10.47□□□□□ -0.73
VIPAS39-203ENST00000448935 GYG2O15488 501 aa10.47□□□□□ -0.73
VIPAS39-203ENST00000448935 OR1I1O60431 355 aa10.47□□□□□ -0.73
VIPAS39-203ENST00000448935 NIPSNAP2O75323 286 aa10.47□□□□□ -0.73
VIPAS39-203ENST00000448935 TULP3O75386 442 aa10.47□□□□□ -0.73
VIPAS39-203ENST00000448935 SUPT7LO94864 414 aa10.47□□□□□ -0.73
VIPAS39-203ENST00000448935 GFAPP14136 432 aa10.47□□□□□ -0.73
VIPAS39-203ENST00000448935 EZRP15311 586 aaKnown RBP10.47□□□□□ -0.73
VIPAS39-203ENST00000448935 SP100P23497 879 aaPredicted RBP10.47□□□□□ -0.73
VIPAS39-203ENST00000448935 PRDX6P30041 224 aa10.47□□□□□ -0.73
VIPAS39-203ENST00000448935 ADSLP30566 484 aaPredicted RBP10.47□□□□□ -0.73
VIPAS39-203ENST00000448935 VIPR1P32241 457 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms