RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 DDX18Q9NVP1 670 aaKnown RBP8.49□□□□□ -1.05
PTPN3-204ENST00000446349 FZD1Q9UP38 647 aa8.49□□□□□ -1.05
PTPN3-204ENST00000446349 PCDHB3Q9Y5E6 796 aa8.49□□□□□ -1.05
PTPN3-204ENST00000446349 H3BUI4 141 aa8.49□□□□□ -1.05
PTPN3-204ENST00000446349 GABRDO14764 452 aa8.49□□□□□ -1.05
PTPN3-204ENST00000446349 ERAL1O75616 437 aaKnown RBP8.49□□□□□ -1.05
PTPN3-204ENST00000446349 PRAMEF1O95521 474 aa8.49□□□□□ -1.05
PTPN3-204ENST00000446349 TFPIP10646 304 aa8.49□□□□□ -1.05
PTPN3-204ENST00000446349 CRHR1P34998 444 aa8.49□□□□□ -1.05
PTPN3-204ENST00000446349 ARHGAP1Q07960 439 aa8.49□□□□□ -1.05
PTPN3-204ENST00000446349 NUP54Q7Z3B4 507 aa8.49□□□□□ -1.05
PTPN3-204ENST00000446349 KBTBD6Q86V97 674 aa8.49□□□□□ -1.05
PTPN3-204ENST00000446349 FAM98AQ8NCA5 519 aaKnown RBP8.49□□□□□ -1.05
PTPN3-204ENST00000446349 BHLHE22Q8NFJ8 381 aaPredicted RBP8.49□□□□□ -1.05
PTPN3-204ENST00000446349 SIPA1Q96FS4 1042 aa8.49□□□□□ -1.05
PTPN3-204ENST00000446349 NUSAP1Q9BXS6 441 aaKnown RBP8.49□□□□□ -1.05
PTPN3-204ENST00000446349 YIPF3Q9GZM5 350 aa8.49□□□□□ -1.05
PTPN3-204ENST00000446349 RERGLQ9H628 205 aa8.49□□□□□ -1.05
PTPN3-204ENST00000446349 WDR26Q9H7D7 661 aa8.49□□□□□ -1.05
PTPN3-204ENST00000446349 NOD2Q9HC29 1040 aa8.49□□□□□ -1.05
PTPN3-204ENST00000446349 BPIFA1Q9NP55 256 aa8.49□□□□□ -1.05
PTPN3-204ENST00000446349 FETUBQ9UGM5 382 aa8.49□□□□□ -1.05
PTPN3-204ENST00000446349 PEAK1Q9H792 1746 aa8.49□□□□□ -1.05
PTPN3-204ENST00000446349 PRORSD1PA6NEY8 169 aa8.49□□□□□ -1.05
PTPN3-204ENST00000446349 OR5K4A6NMS3 321 aa8.49□□□□□ -1.05
PTPN3-204ENST00000446349 USP12O75317 370 aa8.49□□□□□ -1.05
PTPN3-204ENST00000446349 TRBC1P01850 177 aa8.49□□□□□ -1.05
PTPN3-204ENST00000446349 CCR8P51685 355 aa8.49□□□□□ -1.05
PTPN3-204ENST00000446349 MAPK10P53779 464 aa8.49□□□□□ -1.05
PTPN3-204ENST00000446349 PDK4Q16654 411 aa8.49□□□□□ -1.05
PTPN3-204ENST00000446349 HDDC2Q7Z4H3 204 aa8.49□□□□□ -1.05
PTPN3-204ENST00000446349 ATAD1Q8NBU5 361 aa8.49□□□□□ -1.05
PTPN3-204ENST00000446349 CKAP2Q8WWK9 683 aa8.49□□□□□ -1.05
PTPN3-204ENST00000446349 MTFMTQ96DP5 389 aaKnown RBP8.49□□□□□ -1.05
PTPN3-204ENST00000446349 VPS35Q96QK1 796 aa8.49□□□□□ -1.05
PTPN3-204ENST00000446349 BTBD1Q9H0C5 482 aa8.49□□□□□ -1.05
PTPN3-204ENST00000446349 TRMT13Q9NUP7 481 aaKnown RBP8.49□□□□□ -1.05
PTPN3-204ENST00000446349 RBPJLQ9UBG7 517 aa8.49□□□□□ -1.05
PTPN3-204ENST00000446349 NAV1Q8NEY1 1877 aa8.49□□□□□ -1.05
PTPN3-204ENST00000446349 MATN4O95460 622 aa8.48□□□□□ -1.05
PTPN3-204ENST00000446349 LATS1O95835 1130 aa8.48□□□□□ -1.05
PTPN3-204ENST00000446349 DLG1Q12959 904 aa8.48□□□□□ -1.05
PTPN3-204ENST00000446349 METTL21CQ5VZV1 264 aa8.48□□□□□ -1.05
PTPN3-204ENST00000446349 PRR23CQ6ZRP0 262 aa8.48□□□□□ -1.05
PTPN3-204ENST00000446349 SLC9B2Q86UD5 537 aa8.48□□□□□ -1.05
PTPN3-204ENST00000446349 OFCC1Q8IZS5 231 aa8.48□□□□□ -1.05
PTPN3-204ENST00000446349 TDRD1Q9BXT4 1180 aaKnown RBP8.48□□□□□ -1.05
PTPN3-204ENST00000446349 SLC40A1Q9NP59 571 aa8.48□□□□□ -1.05
PTPN3-204ENST00000446349 TLL2Q9Y6L7 1015 aa8.48□□□□□ -1.05
PTPN3-204ENST00000446349 DCXO43602 365 aa8.48□□□□□ -1.05
PTPN3-204ENST00000446349 COQ9O75208 318 aa8.48□□□□□ -1.05
PTPN3-204ENST00000446349 CCNE2O96020 404 aa8.48□□□□□ -1.05
PTPN3-204ENST00000446349 HNRNPCP07910 306 aaKnown RBP eCLIP8.48□□□□□ -1.05
PTPN3-204ENST00000446349 GDI1P31150 447 aa8.48□□□□□ -1.05
PTPN3-204ENST00000446349 CCKBRP32239 447 aa8.48□□□□□ -1.05
PTPN3-204ENST00000446349 KIR3DL1P43629 444 aa8.48□□□□□ -1.05
PTPN3-204ENST00000446349 AP1S2P56377 157 aa8.48□□□□□ -1.05
PTPN3-204ENST00000446349 AUHQ13825 339 aaKnown RBP8.48□□□□□ -1.05
PTPN3-204ENST00000446349 ARSHQ5FYA8 562 aa8.48□□□□□ -1.05
PTPN3-204ENST00000446349 MIIPQ5JXC2 388 aa8.48□□□□□ -1.05
PTPN3-204ENST00000446349 ARMC4Q5T2S8 1044 aa8.48□□□□□ -1.05
PTPN3-204ENST00000446349 RNF43Q68DV7 783 aa8.48□□□□□ -1.05
PTPN3-204ENST00000446349 FBXO42Q6P3S6 717 aa8.48□□□□□ -1.05
PTPN3-204ENST00000446349 TMPRSS11AQ6ZMR5 421 aa8.48□□□□□ -1.05
PTPN3-204ENST00000446349 CFAP52Q8N1V2 620 aa8.48□□□□□ -1.05
PTPN3-204ENST00000446349 RFKQ969G6 155 aa8.48□□□□□ -1.05
PTPN3-204ENST00000446349 PLEKHG4BQ96PX9 1271 aa8.48□□□□□ -1.05
PTPN3-204ENST00000446349 GDAP2Q9NXN4 497 aa8.48□□□□□ -1.05
PTPN3-204ENST00000446349 TCAF1Q9Y4C2 921 aa8.48□□□□□ -1.05
PTPN3-204ENST00000446349 C10orf71Q711Q0 1435 aa8.48□□□□□ -1.05
PTPN3-204ENST00000446349 TRIM38O00635 465 aa8.48□□□□□ -1.05
PTPN3-204ENST00000446349 NRP1O14786 923 aa8.48□□□□□ -1.05
PTPN3-204ENST00000446349 FSBPO95073 299 aa8.48□□□□□ -1.05
PTPN3-204ENST00000446349 SOD2P04179 222 aa8.48□□□□□ -1.05
PTPN3-204ENST00000446349 TAL1P17542 331 aaPredicted RBP8.48□□□□□ -1.05
PTPN3-204ENST00000446349 MAPK12P53778 367 aa8.48□□□□□ -1.05
PTPN3-204ENST00000446349 SLC34A1Q06495 639 aa8.48□□□□□ -1.05
PTPN3-204ENST00000446349 PDCD4Q53EL6 469 aaKnown RBP8.48□□□□□ -1.05
PTPN3-204ENST00000446349 FNBP1LQ5T0N5 605 aa8.48□□□□□ -1.05
PTPN3-204ENST00000446349 LIN54Q6MZP7 749 aa8.48□□□□□ -1.05
PTPN3-204ENST00000446349 JAZF1Q86VZ6 243 aa8.48□□□□□ -1.05
PTPN3-204ENST00000446349 TBC1D21Q8IYX1 336 aa8.48□□□□□ -1.05
PTPN3-204ENST00000446349 EMID1Q96A84 441 aaPredicted RBP8.48□□□□□ -1.05
PTPN3-204ENST00000446349 PNPLA2Q96AD5 504 aa8.48□□□□□ -1.05
PTPN3-204ENST00000446349 TUBGCP5Q96RT8 1024 aa8.48□□□□□ -1.05
PTPN3-204ENST00000446349 CCDC28BQ9BUN5 200 aa8.48□□□□□ -1.05
PTPN3-204ENST00000446349 ANKHQ9HCJ1 492 aa8.48□□□□□ -1.05
PTPN3-204ENST00000446349 SNX15Q9NRS6 342 aa8.48□□□□□ -1.05
PTPN3-204ENST00000446349 KLRG2A4D1S0 409 aaPredicted RBP8.48□□□□□ -1.05
PTPN3-204ENST00000446349 OR2AG2A6NM03 316 aa8.48□□□□□ -1.05
PTPN3-204ENST00000446349 PRR5-ARHGAP8B1AHC4 643 aa8.48□□□□□ -1.05
PTPN3-204ENST00000446349 STBD1O95210 358 aa8.48□□□□□ -1.05
PTPN3-204ENST00000446349 NT5EP21589 574 aa8.48□□□□□ -1.05
PTPN3-204ENST00000446349 SLC25A24Q6NUK1 477 aa8.48□□□□□ -1.05
PTPN3-204ENST00000446349 TRAF7Q6Q0C0 670 aa8.48□□□□□ -1.05
PTPN3-204ENST00000446349 CES3Q6UWW8 571 aa8.48□□□□□ -1.05
PTPN3-204ENST00000446349 MON1BQ7L1V2 547 aa8.48□□□□□ -1.05
PTPN3-204ENST00000446349 SPOCK2Q92563 424 aa8.48□□□□□ -1.05
PTPN3-204ENST00000446349 NR4A3Q92570 626 aa8.48□□□□□ -1.05
PTPN3-204ENST00000446349 CHST7Q9NS84 486 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms