RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 ATP6V0D2Q8N8Y2 350 aa13.86□□□□□ -0.19
VPS52-212ENST00000445902 EDEM1Q92611 657 aa13.86□□□□□ -0.19
VPS52-212ENST00000445902 PABPC5Q96DU9 382 aaKnown RBP13.86□□□□□ -0.19
VPS52-212ENST00000445902 BTN2A3PQ96KV6 586 aa13.86□□□□□ -0.19
VPS52-212ENST00000445902 NEK6Q9HC98 313 aa13.86□□□□□ -0.19
VPS52-212ENST00000445902 THG1LQ9NWX6 298 aaKnown RBP13.86□□□□□ -0.19
VPS52-212ENST00000445902 DDIT4Q9NX09 232 aa13.86□□□□□ -0.19
VPS52-212ENST00000445902 BRCA1P38398 1863 aaKnown RBP13.86□□□□□ -0.19
VPS52-212ENST00000445902 TTC34A8MYJ7 566 aa13.86□□□□□ -0.19
VPS52-212ENST00000445902 CRCPO75575 148 aa13.86□□□□□ -0.19
VPS52-212ENST00000445902 GABARAPO95166 117 aa13.86□□□□□ -0.19
VPS52-212ENST00000445902 DNAJB1P25685 340 aa13.86□□□□□ -0.19
VPS52-212ENST00000445902 GTF2E2P29084 291 aaKnown RBP13.86□□□□□ -0.19
VPS52-212ENST00000445902 HERVK_113P63132 956 aa13.86□□□□□ -0.19
VPS52-212ENST00000445902 IL1RL1Q01638 556 aa13.86□□□□□ -0.19
VPS52-212ENST00000445902 NBPF12Q5TAG4 269 aaPredicted RBP13.86□□□□□ -0.19
VPS52-212ENST00000445902 FAM83FQ8NEG4 500 aaPredicted RBP13.86□□□□□ -0.19
VPS52-212ENST00000445902 MCOLN3Q8TDD5 553 aa13.86□□□□□ -0.19
VPS52-212ENST00000445902 TRIB2Q92519 343 aa13.86□□□□□ -0.19
VPS52-212ENST00000445902 ELMO1Q92556 727 aa13.86□□□□□ -0.19
VPS52-212ENST00000445902 FIG4Q92562 907 aa13.86□□□□□ -0.19
VPS52-212ENST00000445902 RORBQ92753 470 aa13.86□□□□□ -0.19
VPS52-212ENST00000445902 SPATA33Q96N06 139 aa13.86□□□□□ -0.19
VPS52-212ENST00000445902 ERVK-6Q9BXR3 956 aa13.86□□□□□ -0.19
VPS52-212ENST00000445902 R3HDMLQ9H3Y0 253 aa13.86□□□□□ -0.19
VPS52-212ENST00000445902 PARVBQ9HBI1 364 aa13.86□□□□□ -0.19
VPS52-212ENST00000445902 SPO11Q9Y5K1 396 aa13.86□□□□□ -0.19
VPS52-212ENST00000445902 ILVBLA1L0T0 632 aa13.85□□□□□ -0.19
VPS52-212ENST00000445902 SOWAHBA6NEL2 793 aa13.85□□□□□ -0.19
VPS52-212ENST00000445902 GAS2O43903 313 aaKnown RBP13.85□□□□□ -0.19
VPS52-212ENST00000445902 RFPL2O75678 378 aa13.85□□□□□ -0.19
VPS52-212ENST00000445902 MYL3P08590 195 aa13.85□□□□□ -0.19
VPS52-212ENST00000445902 CDH1P12830 882 aa13.85□□□□□ -0.19
VPS52-212ENST00000445902 PTPN2P17706 415 aa13.85□□□□□ -0.19
VPS52-212ENST00000445902 SERPINB10P48595 397 aa13.85□□□□□ -0.19
VPS52-212ENST00000445902 IL5RAQ01344 420 aa13.85□□□□□ -0.19
VPS52-212ENST00000445902 RSBN1Q5VWQ0 802 aaPredicted RBP13.85□□□□□ -0.19
VPS52-212ENST00000445902 TTC23Q5W5X9 447 aa13.85□□□□□ -0.19
VPS52-212ENST00000445902 SPATC1Q76KD6 591 aa13.85□□□□□ -0.19
VPS52-212ENST00000445902 OR6P1Q8NGX9 317 aa13.85□□□□□ -0.19
VPS52-212ENST00000445902 LILRB4Q8NHJ6 448 aa13.85□□□□□ -0.19
VPS52-212ENST00000445902 DSN1Q9H410 356 aa13.85□□□□□ -0.19
VPS52-212ENST00000445902 NOTOA8MTQ0 251 aa13.85□□□□□ -0.19
VPS52-212ENST00000445902 CYP4B1P13584 511 aa13.85□□□□□ -0.19
VPS52-212ENST00000445902 ITIH1P19827 911 aa13.85□□□□□ -0.19
VPS52-212ENST00000445902 TKTL1P51854 596 aa13.85□□□□□ -0.19
VPS52-212ENST00000445902 CHRNB3Q05901 458 aa13.85□□□□□ -0.19
VPS52-212ENST00000445902 FSCN1Q16658 493 aaKnown RBP13.85□□□□□ -0.19
VPS52-212ENST00000445902 AAK1Q2M2I8 961 aa13.85□□□□□ -0.19
VPS52-212ENST00000445902 SULT1C3Q6IMI6 304 aa13.85□□□□□ -0.19
VPS52-212ENST00000445902 GALNT5Q7Z7M9 940 aa13.85□□□□□ -0.19
VPS52-212ENST00000445902 P2RY8Q86VZ1 359 aa13.85□□□□□ -0.19
VPS52-212ENST00000445902 LYSMD2Q8IV50 215 aa13.85□□□□□ -0.19
VPS52-212ENST00000445902 CALML6Q8TD86 181 aa13.85□□□□□ -0.19
VPS52-212ENST00000445902 UBXN10Q96LJ8 280 aa13.85□□□□□ -0.19
VPS52-212ENST00000445902 FEM1AQ9BSK4 669 aa13.85□□□□□ -0.19
VPS52-212ENST00000445902 BTBD2Q9BX70 525 aa13.85□□□□□ -0.19
VPS52-212ENST00000445902 GOLGA2P5Q9HBQ8 144 aa13.85□□□□□ -0.19
VPS52-212ENST00000445902 FBXO8Q9NRD0 319 aa13.85□□□□□ -0.19
VPS52-212ENST00000445902 OR12D3Q9UGF7 316 aa13.85□□□□□ -0.19
VPS52-212ENST00000445902 FBXO10Q9UK96 956 aa13.85□□□□□ -0.19
VPS52-212ENST00000445902 GPR45Q9Y5Y3 372 aa13.85□□□□□ -0.19
VPS52-212ENST00000445902 YJEFN3A6XGL0 299 aa13.84□□□□□ -0.19
VPS52-212ENST00000445902 SLC22A1O15245 554 aa13.84□□□□□ -0.19
VPS52-212ENST00000445902 NCAM2O15394 837 aa13.84□□□□□ -0.19
VPS52-212ENST00000445902 FADS2O95864 444 aaKnown RBP13.84□□□□□ -0.19
VPS52-212ENST00000445902 CST1P01037 141 aa13.84□□□□□ -0.19
VPS52-212ENST00000445902 PAMP19021 973 aa13.84□□□□□ -0.19
VPS52-212ENST00000445902 ARPC4P59998 168 aa13.84□□□□□ -0.19
VPS52-212ENST00000445902 GALNT1Q10472 559 aaPredicted RBP13.84□□□□□ -0.19
VPS52-212ENST00000445902 NKG7Q16617 165 aa13.84□□□□□ -0.19
VPS52-212ENST00000445902 STEAP3Q658P3 488 aa13.84□□□□□ -0.19
VPS52-212ENST00000445902 DESI1Q6ICB0 168 aa13.84□□□□□ -0.19
VPS52-212ENST00000445902 CCDC103Q8IW40 242 aa13.84□□□□□ -0.19
VPS52-212ENST00000445902 PIK3C3Q8NEB9 887 aa13.84□□□□□ -0.19
VPS52-212ENST00000445902 DYNC2LI1Q8TCX1 351 aa13.84□□□□□ -0.19
VPS52-212ENST00000445902 SIK2Q9H0K1 926 aa13.84□□□□□ -0.19
VPS52-212ENST00000445902 WDR6Q9NNW5 1121 aaKnown RBP13.84□□□□□ -0.19
VPS52-212ENST00000445902 TBC1D14Q9P2M4 693 aa13.84□□□□□ -0.19
VPS52-212ENST00000445902 CAB39Q9Y376 341 aaPredicted RBP13.84□□□□□ -0.19
VPS52-212ENST00000445902 COL4A5P29400 1685 aa13.84□□□□□ -0.19
VPS52-212ENST00000445902 MTSS1O43312 755 aa13.84□□□□□ -0.19
VPS52-212ENST00000445902 MATN4O95460 622 aa13.84□□□□□ -0.19
VPS52-212ENST00000445902 FTH1P02794 183 aa13.84□□□□□ -0.19
VPS52-212ENST00000445902 EIF2S1P05198 315 aaKnown RBP13.84□□□□□ -0.19
VPS52-212ENST00000445902 FYNP06241 537 aa13.84□□□□□ -0.19
VPS52-212ENST00000445902 ENO2P09104 434 aaPredicted RBP13.84□□□□□ -0.19
VPS52-212ENST00000445902 PRDX3P30048 256 aaKnown RBP13.84□□□□□ -0.19
VPS52-212ENST00000445902 TRPC1P48995 793 aa13.84□□□□□ -0.19
VPS52-212ENST00000445902 OAZ1P54368 228 aa13.84□□□□□ -0.19
VPS52-212ENST00000445902 MAP3K7CLP57077 242 aa13.84□□□□□ -0.19
VPS52-212ENST00000445902 LAPTM4AQ15012 233 aa13.84□□□□□ -0.19
VPS52-212ENST00000445902 FAM98BQ52LJ0 330 aaKnown RBP13.84□□□□□ -0.19
VPS52-212ENST00000445902 TTC16Q8NEE8 873 aa13.84□□□□□ -0.19
VPS52-212ENST00000445902 OR10Q1Q8NGQ4 319 aa13.84□□□□□ -0.19
VPS52-212ENST00000445902 TXNDC15Q96J42 360 aa13.84□□□□□ -0.19
VPS52-212ENST00000445902 HSFY1Q96LI6 401 aa13.84□□□□□ -0.19
VPS52-212ENST00000445902 TRMOQ9BU70 441 aa13.84□□□□□ -0.19
VPS52-212ENST00000445902 ASPSCR1Q9BZE9 553 aa13.84□□□□□ -0.19
VPS52-212ENST00000445902 TREX1Q9NSU2 369 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms