RNA–Protein interactions for RNA: ENST00000445181.5

C9orf3-207, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 873 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-207ENST00000445181 BPTFQ12830 3046 aa23.69■■□□□ 1.38
C9orf3-207ENST00000445181 DMXL2Q8TDJ6 3036 aa23.68■■□□□ 1.38
C9orf3-207ENST00000445181 LY6G6EA0A0G2JKS1 128 aa23.68■■□□□ 1.38
C9orf3-207ENST00000445181 B4DGG1 531 aa23.68■■□□□ 1.38
C9orf3-207ENST00000445181 NUAK1O60285 661 aa23.68■■□□□ 1.38
C9orf3-207ENST00000445181 ZNF8P17098 575 aaPredicted RBP23.68■■□□□ 1.38
C9orf3-207ENST00000445181 ACTR1BP42025 376 aa23.68■■□□□ 1.38
C9orf3-207ENST00000445181 GRIA1P42261 906 aa23.68■■□□□ 1.38
C9orf3-207ENST00000445181 ACTR1AP61163 376 aa23.68■■□□□ 1.38
C9orf3-207ENST00000445181 INSM1Q01101 510 aaPredicted RBP23.68■■□□□ 1.38
C9orf3-207ENST00000445181 GPS1Q13098 491 aa23.68■■□□□ 1.38
C9orf3-207ENST00000445181 PEX6Q13608 980 aa23.68■■□□□ 1.38
C9orf3-207ENST00000445181 GTF2H3Q13889 308 aa23.68■■□□□ 1.38
C9orf3-207ENST00000445181 LRP8Q14114 963 aa23.68■■□□□ 1.38
C9orf3-207ENST00000445181 ADGRG6Q86SQ4 1221 aa23.68■■□□□ 1.38
C9orf3-207ENST00000445181 NRROSQ86YC3 692 aa23.68■■□□□ 1.38
C9orf3-207ENST00000445181 KYQ8NBH2 561 aa23.68■■□□□ 1.38
C9orf3-207ENST00000445181 IFI44Q8TCB0 444 aa23.68■■□□□ 1.38
C9orf3-207ENST00000445181 ZNF398Q8TD17 642 aa23.68■■□□□ 1.38
C9orf3-207ENST00000445181 ASB8Q9H765 288 aa23.68■■□□□ 1.38
C9orf3-207ENST00000445181 EIF2B3Q9NR50 452 aaKnown RBP23.68■■□□□ 1.38
C9orf3-207ENST00000445181 TAAR2Q9P1P5 351 aa23.68■■□□□ 1.38
C9orf3-207ENST00000445181 PADI4Q9UM07 663 aa23.68■■□□□ 1.38
C9orf3-207ENST00000445181 U3KQA8 63 aa23.68■■□□□ 1.38
C9orf3-207ENST00000445181 GPR89AB7ZAQ6 455 aa23.67■■□□□ 1.38
C9orf3-207ENST00000445181 GAPDHSO14556 408 aaPredicted RBP23.67■■□□□ 1.38
C9orf3-207ENST00000445181 GPR39O43194 453 aa23.67■■□□□ 1.38
C9orf3-207ENST00000445181 GRID2O43424 1007 aa23.67■■□□□ 1.38
C9orf3-207ENST00000445181 VEGFDO43915 354 aa23.67■■□□□ 1.38
C9orf3-207ENST00000445181 SRP72O76094 671 aaKnown RBP23.67■■□□□ 1.38
C9orf3-207ENST00000445181 CDK14O94921 469 aa23.67■■□□□ 1.38
C9orf3-207ENST00000445181 GPR89BP0CG08 455 aa23.67■■□□□ 1.38
C9orf3-207ENST00000445181 FNTAP49354 379 aa23.67■■□□□ 1.38
C9orf3-207ENST00000445181 CCDC38Q502W7 563 aa23.67■■□□□ 1.38
C9orf3-207ENST00000445181 LDLRAP1Q5SW96 308 aa23.67■■□□□ 1.38
C9orf3-207ENST00000445181 CERCAMQ5T4B2 595 aa23.67■■□□□ 1.38
C9orf3-207ENST00000445181 GUSBP11Q6P575 273 aa23.67■■□□□ 1.38
C9orf3-207ENST00000445181 EFL1Q7Z2Z2 1120 aaKnown RBP23.67■■□□□ 1.38
C9orf3-207ENST00000445181 DNAJC1Q96KC8 554 aaKnown RBP23.67■■□□□ 1.38
C9orf3-207ENST00000445181 ZCCHC2Q9C0B9 1178 aaKnown RBP23.67■■□□□ 1.38
C9orf3-207ENST00000445181 CASS4Q9NQ75 786 aa23.67■■□□□ 1.38
C9orf3-207ENST00000445181 RALYQ9UKM9 306 aaKnown RBP23.67■■□□□ 1.38
C9orf3-207ENST00000445181 TMPRSS11EQ9UL52 423 aa23.67■■□□□ 1.38
C9orf3-207ENST00000445181 CLCA2Q9UQC9 943 aa23.67■■□□□ 1.38
C9orf3-207ENST00000445181 RAXQ9Y2V3 346 aa23.67■■□□□ 1.38
C9orf3-207ENST00000445181 CCDC78A2IDD5 438 aa23.66■■□□□ 1.38
C9orf3-207ENST00000445181 CCL22O00626 93 aa23.66■■□□□ 1.38
C9orf3-207ENST00000445181 ACP5P13686 325 aa23.66■■□□□ 1.38
C9orf3-207ENST00000445181 TMEM115Q12893 351 aaPredicted RBP23.66■■□□□ 1.38
C9orf3-207ENST00000445181 LAMB3Q13751 1172 aa23.66■■□□□ 1.38
C9orf3-207ENST00000445181 CRTC3Q6UUV7 619 aa23.66■■□□□ 1.38
C9orf3-207ENST00000445181 CACTIN-AS1Q8N1I8 211 aa23.66■■□□□ 1.38
C9orf3-207ENST00000445181 ZDHHC1Q8WTX9 485 aa23.66■■□□□ 1.38
C9orf3-207ENST00000445181 STYXQ8WUJ0 223 aa23.66■■□□□ 1.38
C9orf3-207ENST00000445181 NXPE2Q96DL1 559 aa23.66■■□□□ 1.38
C9orf3-207ENST00000445181 C19orf43Q9BQ61 176 aa23.66■■□□□ 1.38
C9orf3-207ENST00000445181 SPATS2LQ9NUQ6 558 aaKnown RBP23.66■■□□□ 1.38
C9orf3-207ENST00000445181 NLE1Q9NVX2 485 aaPredicted RBP23.66■■□□□ 1.38
C9orf3-207ENST00000445181 CRLS1Q9UJA2 301 aa23.66■■□□□ 1.38
C9orf3-207ENST00000445181 PCYT1BQ9Y5K3 369 aaPredicted RBP23.66■■□□□ 1.38
C9orf3-207ENST00000445181 SLC30A1Q9Y6M5 507 aa23.66■■□□□ 1.38
C9orf3-207ENST00000445181 MYLKQ15746 1914 aa23.65■■□□□ 1.38
C9orf3-207ENST00000445181 HEATR9A2RTY3 570 aa23.65■■□□□ 1.38
C9orf3-207ENST00000445181 OPA1O60313 960 aa23.65■■□□□ 1.38
C9orf3-207ENST00000445181 ECEL1O95672 775 aa23.65■■□□□ 1.38
C9orf3-207ENST00000445181 GP1BAP07359 652 aa23.65■■□□□ 1.38
C9orf3-207ENST00000445181 ITGALP20701 1170 aa23.65■■□□□ 1.38
C9orf3-207ENST00000445181 CASQ1P31415 396 aa23.65■■□□□ 1.38
C9orf3-207ENST00000445181 AKT1P31749 480 aa23.65■■□□□ 1.38
C9orf3-207ENST00000445181 PAFAH1B1P43034 410 aa23.65■■□□□ 1.38
C9orf3-207ENST00000445181 NFATC2Q13469 925 aa23.65■■□□□ 1.38
C9orf3-207ENST00000445181 PPP1R7Q15435 360 aa23.65■■□□□ 1.38
C9orf3-207ENST00000445181 SKIDA1Q1XH10 827 aa23.65■■□□□ 1.38
C9orf3-207ENST00000445181 KHDC1Q4VXA5 237 aaKnown RBP23.65■■□□□ 1.38
C9orf3-207ENST00000445181 GPRC6AQ5T6X5 926 aa23.65■■□□□ 1.38
C9orf3-207ENST00000445181 NAT6Q93015 286 aa23.65■■□□□ 1.38
C9orf3-207ENST00000445181 ABCG4Q9H172 646 aa23.65■■□□□ 1.38
C9orf3-207ENST00000445181 SMOXQ9NWM0 555 aa23.65■■□□□ 1.38
C9orf3-207ENST00000445181 ST14Q9Y5Y6 855 aa23.65■■□□□ 1.38
C9orf3-207ENST00000445181 KNTC1P50748 2209 aa23.65■■□□□ 1.38
C9orf3-207ENST00000445181 EME2A4GXA9 379 aaPredicted RBP23.64■■□□□ 1.37
C9orf3-207ENST00000445181 AP3B1O00203 1094 aa23.64■■□□□ 1.37
C9orf3-207ENST00000445181 MT-CO3P00414 261 aa23.64■■□□□ 1.37
C9orf3-207ENST00000445181 TPSB2P20231 275 aa23.64■■□□□ 1.37
C9orf3-207ENST00000445181 MSH3P20585 1137 aa23.64■■□□□ 1.37
C9orf3-207ENST00000445181 MC4RP32245 332 aa23.64■■□□□ 1.37
C9orf3-207ENST00000445181 SESN2P58004 480 aaPredicted RBP23.64■■□□□ 1.37
C9orf3-207ENST00000445181 XIAPP98170 497 aa23.64■■□□□ 1.37
C9orf3-207ENST00000445181 TPSAB1Q15661 275 aa23.64■■□□□ 1.37
C9orf3-207ENST00000445181 PLA2G4EQ3MJ16 856 aa23.64■■□□□ 1.37
C9orf3-207ENST00000445181 LRRTM4Q86VH4 590 aa23.64■■□□□ 1.37
C9orf3-207ENST00000445181 CREG2Q8IUH2 290 aa23.64■■□□□ 1.37
C9orf3-207ENST00000445181 TRAPPC5Q8IUR0 188 aa23.64■■□□□ 1.37
C9orf3-207ENST00000445181 DCBLD1Q8N8Z6 715 aa23.64■■□□□ 1.37
C9orf3-207ENST00000445181 DDHD1Q8NEL9 900 aa23.64■■□□□ 1.37
C9orf3-207ENST00000445181 PPHLN1Q8NEY8 458 aaKnown RBP23.64■■□□□ 1.37
C9orf3-207ENST00000445181 MAPK15Q8TD08 544 aa23.64■■□□□ 1.37
C9orf3-207ENST00000445181 ULK4Q96C45 1275 aa23.64■■□□□ 1.37
C9orf3-207ENST00000445181 DDX47Q9H0S4 455 aaKnown RBP23.64■■□□□ 1.37
C9orf3-207ENST00000445181 KCNK6Q9Y257 313 aa23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms