RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 C1orf61Q13536 156 aa13.95□□□□□ -0.18
SSBP3-208ENST00000444533 HIF1AQ16665 826 aa13.95□□□□□ -0.18
SSBP3-208ENST00000444533 GLE1Q53GS7 698 aaKnown RBP13.95□□□□□ -0.18
SSBP3-208ENST00000444533 GPRC6AQ5T6X5 926 aa13.95□□□□□ -0.18
SSBP3-208ENST00000444533 SDCCAG8Q86SQ7 713 aaPredicted RBP13.95□□□□□ -0.18
SSBP3-208ENST00000444533 LRRTM4Q86VH4 590 aa13.95□□□□□ -0.18
SSBP3-208ENST00000444533 CCNJLQ8IV13 435 aa13.95□□□□□ -0.18
SSBP3-208ENST00000444533 OR4L1Q8NH43 312 aa13.95□□□□□ -0.18
SSBP3-208ENST00000444533 HDAC10Q969S8 669 aa13.95□□□□□ -0.18
SSBP3-208ENST00000444533 LRRC61Q9BV99 259 aa13.95□□□□□ -0.18
SSBP3-208ENST00000444533 KIFC1Q9BW19 673 aa13.95□□□□□ -0.18
SSBP3-208ENST00000444533 DPH5Q9H2P9 285 aa13.95□□□□□ -0.18
SSBP3-208ENST00000444533 ARFGAP3Q9NP61 516 aa13.95□□□□□ -0.18
SSBP3-208ENST00000444533 WHRNQ9P202 907 aa13.95□□□□□ -0.18
SSBP3-208ENST00000444533 ATXN10Q9UBB4 475 aa13.95□□□□□ -0.18
SSBP3-208ENST00000444533 KLF15Q9UIH9 416 aa13.95□□□□□ -0.18
SSBP3-208ENST00000444533 CNOT6Q9ULM6 557 aaKnown RBP13.95□□□□□ -0.18
SSBP3-208ENST00000444533 SOX13Q9UN79 622 aa13.95□□□□□ -0.18
SSBP3-208ENST00000444533 SNX24Q9Y343 169 aa13.95□□□□□ -0.18
SSBP3-208ENST00000444533 FAM237BA0A1B0GVD1 139 aa13.94□□□□□ -0.18
SSBP3-208ENST00000444533 KLHL33A6NCF5 533 aa13.94□□□□□ -0.18
SSBP3-208ENST00000444533 ESPNB1AK53 854 aa13.94□□□□□ -0.18
SSBP3-208ENST00000444533 QSOX1O00391 747 aa13.94□□□□□ -0.18
SSBP3-208ENST00000444533 NUAK1O60285 661 aa13.94□□□□□ -0.18
SSBP3-208ENST00000444533 AVILO75366 819 aa13.94□□□□□ -0.18
SSBP3-208ENST00000444533 TTC4O95801 387 aa13.94□□□□□ -0.18
SSBP3-208ENST00000444533 CEACAM1P13688 526 aa13.94□□□□□ -0.18
SSBP3-208ENST00000444533 SLC2A4P14672 509 aa13.94□□□□□ -0.18
SSBP3-208ENST00000444533 NOVA1P51513 510 aaKnown RBP13.94□□□□□ -0.18
SSBP3-208ENST00000444533 DAB2P98082 770 aa13.94□□□□□ -0.18
SSBP3-208ENST00000444533 XIAPP98170 497 aa13.94□□□□□ -0.18
SSBP3-208ENST00000444533 THOC5Q13769 683 aaKnown RBP13.94□□□□□ -0.18
SSBP3-208ENST00000444533 SHBQ15464 509 aa13.94□□□□□ -0.18
SSBP3-208ENST00000444533 KCTD19Q17RG1 926 aaPredicted RBP13.94□□□□□ -0.18
SSBP3-208ENST00000444533 INSCQ1MX18 579 aa13.94□□□□□ -0.18
SSBP3-208ENST00000444533 DEFB133Q30KQ1 61 aa13.94□□□□□ -0.18
SSBP3-208ENST00000444533 BBS9Q3SYG4 887 aa13.94□□□□□ -0.18
SSBP3-208ENST00000444533 PYCR3Q53H96 274 aa13.94□□□□□ -0.18
SSBP3-208ENST00000444533 MRNIPQ6NTE8 343 aa13.94□□□□□ -0.18
SSBP3-208ENST00000444533 HIBCHQ6NVY1 386 aaPredicted RBP13.94□□□□□ -0.18
SSBP3-208ENST00000444533 ZCCHC8Q6NZY4 707 aaKnown RBP13.94□□□□□ -0.18
SSBP3-208ENST00000444533 ZNF449Q6P9G9 518 aa13.94□□□□□ -0.18
SSBP3-208ENST00000444533 DBX2Q6ZNG2 339 aa13.94□□□□□ -0.18
SSBP3-208ENST00000444533 ZNF534Q76KX8 674 aa13.94□□□□□ -0.18
SSBP3-208ENST00000444533 CHST15Q7LFX5 561 aaPredicted RBP13.94□□□□□ -0.18
SSBP3-208ENST00000444533 ADGRG6Q86SQ4 1221 aa13.94□□□□□ -0.18
SSBP3-208ENST00000444533 CAND1Q86VP6 1230 aaKnown RBP13.94□□□□□ -0.18
SSBP3-208ENST00000444533 NXPE1Q8N323 547 aa13.94□□□□□ -0.18
SSBP3-208ENST00000444533 FAM46DQ8NEK8 389 aa13.94□□□□□ -0.18
SSBP3-208ENST00000444533 KNL1Q8NG31 2342 aa13.94□□□□□ -0.18
SSBP3-208ENST00000444533 OR4C6Q8NH72 309 aa13.94□□□□□ -0.18
SSBP3-208ENST00000444533 LRRC39Q96DD0 335 aa13.94□□□□□ -0.18
SSBP3-208ENST00000444533 STAMBPL1Q96FJ0 436 aa13.94□□□□□ -0.18
SSBP3-208ENST00000444533 SCARF2Q96GP6 870 aaPredicted RBP13.94□□□□□ -0.18
SSBP3-208ENST00000444533 TMEM168Q9H0V1 697 aa13.94□□□□□ -0.18
SSBP3-208ENST00000444533 DPEP2Q9H4A9 486 aa13.94□□□□□ -0.18
SSBP3-208ENST00000444533 CATSPERZQ9NTU4 200 aa13.94□□□□□ -0.18
SSBP3-208ENST00000444533 UCKL1Q9NWZ5 548 aa13.94□□□□□ -0.18
SSBP3-208ENST00000444533 ZDHHC3Q9NYG2 299 aa13.94□□□□□ -0.18
SSBP3-208ENST00000444533 OAS3Q9Y6K5 1087 aaKnown RBP13.94□□□□□ -0.18
SSBP3-208ENST00000444533 TP53BP1Q12888 1972 aaPredicted RBP13.94□□□□□ -0.18
SSBP3-208ENST00000444533 TMEM131Q92545 1883 aa13.93□□□□□ -0.18
SSBP3-208ENST00000444533 CCDC162PA2VCL2 907 aa13.93□□□□□ -0.18
SSBP3-208ENST00000444533 CCL22O00626 93 aa13.93□□□□□ -0.18
SSBP3-208ENST00000444533 KCNJ13O60928 360 aa13.93□□□□□ -0.18
SSBP3-208ENST00000444533 MTX2O75431 263 aa13.93□□□□□ -0.18
SSBP3-208ENST00000444533 GOT2P00505 430 aaKnown RBP13.93□□□□□ -0.18
SSBP3-208ENST00000444533 ZNF8P17098 575 aaPredicted RBP13.93□□□□□ -0.18
SSBP3-208ENST00000444533 ACRV1P26436 265 aa13.93□□□□□ -0.18
SSBP3-208ENST00000444533 ACTR1BP42025 376 aa13.93□□□□□ -0.18
SSBP3-208ENST00000444533 RPL21P46778 160 aaKnown RBP13.93□□□□□ -0.18
SSBP3-208ENST00000444533 TTPAP49638 278 aa13.93□□□□□ -0.18
SSBP3-208ENST00000444533 ACTR1AP61163 376 aa13.93□□□□□ -0.18
SSBP3-208ENST00000444533 ACVR1Q04771 509 aa13.93□□□□□ -0.18
SSBP3-208ENST00000444533 TCEA2Q15560 299 aa13.93□□□□□ -0.18
SSBP3-208ENST00000444533 CRTC3Q6UUV7 619 aa13.93□□□□□ -0.18
SSBP3-208ENST00000444533 CEP128Q6ZU80 1094 aa13.93□□□□□ -0.18
SSBP3-208ENST00000444533 CENPUQ71F23 418 aa13.93□□□□□ -0.18
SSBP3-208ENST00000444533 SERPINA9Q86WD7 417 aa13.93□□□□□ -0.18
SSBP3-208ENST00000444533 SLC25A45Q8N413 288 aa13.93□□□□□ -0.18
SSBP3-208ENST00000444533 MMGT1Q8N4V1 131 aa13.93□□□□□ -0.18
SSBP3-208ENST00000444533 DEFB124Q8NES8 71 aa13.93□□□□□ -0.18
SSBP3-208ENST00000444533 OR13J1Q8NGT2 312 aa13.93□□□□□ -0.18
SSBP3-208ENST00000444533 CALML6Q8TD86 181 aa13.93□□□□□ -0.18
SSBP3-208ENST00000444533 ZNF669Q96BR6 464 aaPredicted RBP13.93□□□□□ -0.18
SSBP3-208ENST00000444533 SGSM3Q96HU1 749 aa13.93□□□□□ -0.18
SSBP3-208ENST00000444533 CNDP2Q96KP4 475 aaKnown RBP13.93□□□□□ -0.18
SSBP3-208ENST00000444533 TSSK1BQ9BXA7 367 aa13.93□□□□□ -0.18
SSBP3-208ENST00000444533 TCEAL2Q9H3H9 227 aaPredicted RBP13.93□□□□□ -0.18
SSBP3-208ENST00000444533 OSGEPL1Q9H4B0 414 aa13.93□□□□□ -0.18
SSBP3-208ENST00000444533 FAM96AQ9H5X1 160 aa13.93□□□□□ -0.18
SSBP3-208ENST00000444533 SLC2A6Q9UGQ3 507 aa13.93□□□□□ -0.18
SSBP3-208ENST00000444533 PCOLCE2Q9UKZ9 415 aa13.93□□□□□ -0.18
SSBP3-208ENST00000444533 GPR34Q9UPC5 381 aa13.93□□□□□ -0.18
SSBP3-208ENST00000444533 VPS9D1Q9Y2B5 631 aa13.93□□□□□ -0.18
SSBP3-208ENST00000444533 DNMT3AQ9Y6K1 912 aaPredicted RBP13.93□□□□□ -0.18
SSBP3-208ENST00000444533 RPS6KL1Q9Y6S9 549 aa13.93□□□□□ -0.18
SSBP3-208ENST00000444533 GAPDHSO14556 408 aaPredicted RBP13.92□□□□□ -0.18
SSBP3-208ENST00000444533 YY2O15391 372 aa13.92□□□□□ -0.18
SSBP3-208ENST00000444533 ZW10O43264 779 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms