RNA–Protein interactions for RNA: ENST00000444508.5

SMARCAL1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 711 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-209ENST00000444508 NFATC2Q13469 925 aa17.25■□□□□ 0.35
SMARCAL1-209ENST00000444508 PPP1R7Q15435 360 aa17.25■□□□□ 0.35
SMARCAL1-209ENST00000444508 TPSAB1Q15661 275 aa17.25■□□□□ 0.35
SMARCAL1-209ENST00000444508 SKIDA1Q1XH10 827 aa17.25■□□□□ 0.35
SMARCAL1-209ENST00000444508 CCDC38Q502W7 563 aa17.25■□□□□ 0.35
SMARCAL1-209ENST00000444508 GPRC6AQ5T6X5 926 aa17.25■□□□□ 0.35
SMARCAL1-209ENST00000444508 NLRP9Q7RTR0 991 aa17.25■□□□□ 0.35
SMARCAL1-209ENST00000444508 EFL1Q7Z2Z2 1120 aaKnown RBP17.25■□□□□ 0.35
SMARCAL1-209ENST00000444508 LRRTM4Q86VH4 590 aa17.25■□□□□ 0.35
SMARCAL1-209ENST00000444508 DDHD1Q8NEL9 900 aa17.25■□□□□ 0.35
SMARCAL1-209ENST00000444508 PPHLN1Q8NEY8 458 aaKnown RBP17.25■□□□□ 0.35
SMARCAL1-209ENST00000444508 ZDHHC1Q8WTX9 485 aa17.25■□□□□ 0.35
SMARCAL1-209ENST00000444508 ULK4Q96C45 1275 aa17.25■□□□□ 0.35
SMARCAL1-209ENST00000444508 RANBP9Q96S59 729 aa17.25■□□□□ 0.35
SMARCAL1-209ENST00000444508 CRLS1Q9UJA2 301 aa17.25■□□□□ 0.35
SMARCAL1-209ENST00000444508 PLEKHM1Q9Y4G2 1056 aa17.25■□□□□ 0.35
SMARCAL1-209ENST00000444508 CCDC78A2IDD5 438 aa17.24■□□□□ 0.35
SMARCAL1-209ENST00000444508 EME2A4GXA9 379 aaPredicted RBP17.24■□□□□ 0.35
SMARCAL1-209ENST00000444508 MROH6A6NGR9 719 aa17.24■□□□□ 0.35
SMARCAL1-209ENST00000444508 CCL22O00626 93 aa17.24■□□□□ 0.35
SMARCAL1-209ENST00000444508 CHUKO15111 745 aa17.24■□□□□ 0.35
SMARCAL1-209ENST00000444508 KMOO15229 486 aa17.24■□□□□ 0.35
SMARCAL1-209ENST00000444508 MSH3P20585 1137 aa17.24■□□□□ 0.35
SMARCAL1-209ENST00000444508 ADRA1DP25100 572 aa17.24■□□□□ 0.35
SMARCAL1-209ENST00000444508 MC4RP32245 332 aa17.24■□□□□ 0.35
SMARCAL1-209ENST00000444508 SESN2P58004 480 aaPredicted RBP17.24■□□□□ 0.35
SMARCAL1-209ENST00000444508 XIAPP98170 497 aa17.24■□□□□ 0.35
SMARCAL1-209ENST00000444508 KCTD19Q17RG1 926 aaPredicted RBP17.24■□□□□ 0.35
SMARCAL1-209ENST00000444508 KHDC1Q4VXA5 237 aaKnown RBP17.24■□□□□ 0.35
SMARCAL1-209ENST00000444508 GUSBP11Q6P575 273 aa17.24■□□□□ 0.35
SMARCAL1-209ENST00000444508 OGFOD3Q6PK18 319 aa17.24■□□□□ 0.35
SMARCAL1-209ENST00000444508 CRTC3Q6UUV7 619 aa17.24■□□□□ 0.35
SMARCAL1-209ENST00000444508 SNX20Q7Z614 316 aa17.24■□□□□ 0.35
SMARCAL1-209ENST00000444508 TRAPPC5Q8IUR0 188 aa17.24■□□□□ 0.35
SMARCAL1-209ENST00000444508 GALNT15Q8N3T1 639 aa17.24■□□□□ 0.35
SMARCAL1-209ENST00000444508 OR6C4Q8NGE1 309 aa17.24■□□□□ 0.35
SMARCAL1-209ENST00000444508 SCNM1Q9BWG6 230 aa17.24■□□□□ 0.35
SMARCAL1-209ENST00000444508 DDX47Q9H0S4 455 aaKnown RBP17.24■□□□□ 0.35
SMARCAL1-209ENST00000444508 ABCG4Q9H172 646 aa17.24■□□□□ 0.35
SMARCAL1-209ENST00000444508 SPATS2LQ9NUQ6 558 aaKnown RBP17.24■□□□□ 0.35
SMARCAL1-209ENST00000444508 BFARQ9NZS9 450 aa17.24■□□□□ 0.35
SMARCAL1-209ENST00000444508 PCYT1BQ9Y5K3 369 aaPredicted RBP17.24■□□□□ 0.35
SMARCAL1-209ENST00000444508 BPTFQ12830 3046 aa17.24■□□□□ 0.35
SMARCAL1-209ENST00000444508 H7C0S8 307 aa17.23■□□□□ 0.35
SMARCAL1-209ENST00000444508 NOBOXO60393 691 aa17.23■□□□□ 0.35
SMARCAL1-209ENST00000444508 TOP3BO95985 862 aaKnown RBP17.23■□□□□ 0.35
SMARCAL1-209ENST00000444508 NPY2RP49146 381 aa17.23■□□□□ 0.35
SMARCAL1-209ENST00000444508 SHC2P98077 582 aa17.23■□□□□ 0.35
SMARCAL1-209ENST00000444508 BIRC2Q13490 618 aa17.23■□□□□ 0.35
SMARCAL1-209ENST00000444508 INSCQ1MX18 579 aa17.23■□□□□ 0.35
SMARCAL1-209ENST00000444508 GPR33Q49SQ1 333 aa17.23■□□□□ 0.35
SMARCAL1-209ENST00000444508 C14orf28Q4W4Y0 310 aa17.23■□□□□ 0.35
SMARCAL1-209ENST00000444508 ZRANB3Q5FWF4 1079 aa17.23■□□□□ 0.35
SMARCAL1-209ENST00000444508 SYT10Q6XYQ8 523 aa17.23■□□□□ 0.35
SMARCAL1-209ENST00000444508 GPR156Q8NFN8 814 aa17.23■□□□□ 0.35
SMARCAL1-209ENST00000444508 MAPK15Q8TD08 544 aa17.23■□□□□ 0.35
SMARCAL1-209ENST00000444508 DCUN1D1Q96GG9 259 aa17.23■□□□□ 0.35
SMARCAL1-209ENST00000444508 CDKN2AIPNLQ96HQ2 116 aa17.23■□□□□ 0.35
SMARCAL1-209ENST00000444508 RUNDC3BQ96NL0 473 aa17.23■□□□□ 0.35
SMARCAL1-209ENST00000444508 IL22Q9GZX6 179 aa17.23■□□□□ 0.35
SMARCAL1-209ENST00000444508 KCNK6Q9Y257 313 aa17.23■□□□□ 0.35
SMARCAL1-209ENST00000444508 NEU2Q9Y3R4 380 aa17.23■□□□□ 0.35
SMARCAL1-209ENST00000444508 ST14Q9Y5Y6 855 aa17.23■□□□□ 0.35
SMARCAL1-209ENST00000444508 ZFC3H1O60293 1989 aaKnown RBP17.22■□□□□ 0.35
SMARCAL1-209ENST00000444508 ARHGEF17Q96PE2 2063 aaPredicted RBP17.22■□□□□ 0.35
SMARCAL1-209ENST00000444508 PLXNB3Q9ULL4 1909 aa17.22■□□□□ 0.35
SMARCAL1-209ENST00000444508 CCDC188H7C350 402 aa17.22■□□□□ 0.35
SMARCAL1-209ENST00000444508 FANCGO15287 622 aa17.22■□□□□ 0.35
SMARCAL1-209ENST00000444508 RALBP11234 206 aa17.22■□□□□ 0.35
SMARCAL1-209ENST00000444508 ZNF7P17097 686 aaPredicted RBP17.22■□□□□ 0.35
SMARCAL1-209ENST00000444508 VCLP18206 1134 aa17.22■□□□□ 0.35
SMARCAL1-209ENST00000444508 SPINK2P20155 84 aa17.22■□□□□ 0.35
SMARCAL1-209ENST00000444508 MAGEA6P43360 314 aa17.22■□□□□ 0.35
SMARCAL1-209ENST00000444508 KCNJ11Q14654 390 aa17.22■□□□□ 0.35
SMARCAL1-209ENST00000444508 SMAD1Q15797 465 aaKnown RBP17.22■□□□□ 0.35
SMARCAL1-209ENST00000444508 PLA2G4EQ3MJ16 856 aa17.22■□□□□ 0.35
SMARCAL1-209ENST00000444508 PCID2Q5JVF3 399 aa17.22■□□□□ 0.35
SMARCAL1-209ENST00000444508 TSTD2Q5T7W7 516 aa17.22■□□□□ 0.35
SMARCAL1-209ENST00000444508 LRRC8BQ6P9F7 803 aa17.22■□□□□ 0.35
SMARCAL1-209ENST00000444508 TAS2R42Q7RTR8 314 aa17.22■□□□□ 0.35
SMARCAL1-209ENST00000444508 TMPRSS7Q7RTY8 843 aa17.22■□□□□ 0.35
SMARCAL1-209ENST00000444508 TMPRSS12Q86WS5 348 aa17.22■□□□□ 0.35
SMARCAL1-209ENST00000444508 KLHL7Q8IXQ5 586 aa17.22■□□□□ 0.35
SMARCAL1-209ENST00000444508 NXPE1Q8N323 547 aa17.22■□□□□ 0.35
SMARCAL1-209ENST00000444508 HEXDCQ8WVB3 486 aa17.22■□□□□ 0.35
SMARCAL1-209ENST00000444508 TRIM44Q96DX7 344 aaPredicted RBP17.22■□□□□ 0.35
SMARCAL1-209ENST00000444508 ZNF514Q96K75 400 aaPredicted RBP17.22■□□□□ 0.35
SMARCAL1-209ENST00000444508 COPS8Q99627 209 aa17.22■□□□□ 0.35
SMARCAL1-209ENST00000444508 TIMM29Q9BSF4 260 aa17.22■□□□□ 0.35
SMARCAL1-209ENST00000444508 OSGEPL1Q9H4B0 414 aa17.22■□□□□ 0.35
SMARCAL1-209ENST00000444508 FAM96AQ9H5X1 160 aa17.22■□□□□ 0.35
SMARCAL1-209ENST00000444508 KLC4Q9NSK0 619 aa17.22■□□□□ 0.35
SMARCAL1-209ENST00000444508 ASIC3Q9UHC3 531 aa17.22■□□□□ 0.35
SMARCAL1-209ENST00000444508 PCYOX1Q9UHG3 505 aa17.22■□□□□ 0.35
SMARCAL1-209ENST00000444508 KLK13Q9UKR3 277 aa17.22■□□□□ 0.35
SMARCAL1-209ENST00000444508 RIMKLBQ9ULI2 386 aa17.22■□□□□ 0.35
SMARCAL1-209ENST00000444508 WASF3Q9UPY6 502 aa17.22■□□□□ 0.35
SMARCAL1-209ENST00000444508 TCAF1Q9Y4C2 921 aa17.22■□□□□ 0.35
SMARCAL1-209ENST00000444508 NEUROG3Q9Y4Z2 214 aa17.22■□□□□ 0.35
SMARCAL1-209ENST00000444508 TCRBV7S3A2A0A539 114 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms