RNA–Protein interactions for RNA: ENST00000443908.5

SF1-210, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-210ENST00000443908 MAP7D1Q3KQU3 841 aa13.34□□□□□ -0.27
SF1-210ENST00000443908 ZRANB3Q5FWF4 1079 aa13.34□□□□□ -0.27
SF1-210ENST00000443908 KIAA1324Q6UXG2 1013 aaKnown RBP13.34□□□□□ -0.27
SF1-210ENST00000443908 FAM151BQ6UXP7 276 aa13.34□□□□□ -0.27
SF1-210ENST00000443908 C11orf74Q86VG3 221 aa13.34□□□□□ -0.27
SF1-210ENST00000443908 CACUL1Q86Y37 369 aa13.34□□□□□ -0.27
SF1-210ENST00000443908 PIANPQ8IYJ0 282 aa13.34□□□□□ -0.27
SF1-210ENST00000443908 CYP4X1Q8N118 509 aa13.34□□□□□ -0.27
SF1-210ENST00000443908 PGBD3Q8N328 593 aa13.34□□□□□ -0.27
SF1-210ENST00000443908 ZNF398Q8TD17 642 aa13.34□□□□□ -0.27
SF1-210ENST00000443908 ASB12Q8WXK4 309 aa13.34□□□□□ -0.27
SF1-210ENST00000443908 LPGAT1Q92604 370 aa13.34□□□□□ -0.27
SF1-210ENST00000443908 PIGKQ92643 395 aa13.34□□□□□ -0.27
SF1-210ENST00000443908 VPS35Q96QK1 796 aa13.34□□□□□ -0.27
SF1-210ENST00000443908 WRAP53Q9BUR4 548 aaKnown RBP13.34□□□□□ -0.27
SF1-210ENST00000443908 SLC6A17Q9H1V8 727 aa13.34□□□□□ -0.27
SF1-210ENST00000443908 ABCG8Q9H221 673 aa13.34□□□□□ -0.27
SF1-210ENST00000443908 CENPHQ9H3R5 247 aa13.34□□□□□ -0.27
SF1-210ENST00000443908 ASB8Q9H765 288 aa13.34□□□□□ -0.27
SF1-210ENST00000443908 ITM2CQ9NQX7 267 aa13.34□□□□□ -0.27
SF1-210ENST00000443908 RALYQ9UKM9 306 aaKnown RBP13.34□□□□□ -0.27
SF1-210ENST00000443908 C10orf142B7Z368 130 aa13.33□□□□□ -0.28
SF1-210ENST00000443908 TRIM49D1C9J1S8 452 aa13.33□□□□□ -0.28
SF1-210ENST00000443908 LZTS3O60299 673 aaPredicted RBP13.33□□□□□ -0.28
SF1-210ENST00000443908 TM7SF2O76062 418 aa13.33□□□□□ -0.28
SF1-210ENST00000443908 RECQL5O94762 991 aaPredicted RBP13.33□□□□□ -0.28
SF1-210ENST00000443908 PYGLP06737 847 aa13.33□□□□□ -0.28
SF1-210ENST00000443908 ACRV1P26436 265 aa13.33□□□□□ -0.28
SF1-210ENST00000443908 TEAD1P28347 426 aa13.33□□□□□ -0.28
SF1-210ENST00000443908 ETV3P41162 512 aa13.33□□□□□ -0.28
SF1-210ENST00000443908 PTGER3P43115 390 aa13.33□□□□□ -0.28
SF1-210ENST00000443908 SERPINB8P50452 374 aa13.33□□□□□ -0.28
SF1-210ENST00000443908 RPS21P63220 83 aaKnown RBP13.33□□□□□ -0.28
SF1-210ENST00000443908 TMEM259Q4ZIN3 620 aa13.33□□□□□ -0.28
SF1-210ENST00000443908 RFLNAQ6ZTI6 216 aa13.33□□□□□ -0.28
SF1-210ENST00000443908 NXPE1Q8N323 547 aa13.33□□□□□ -0.28
SF1-210ENST00000443908 ACMSDQ8TDX5 336 aa13.33□□□□□ -0.28
SF1-210ENST00000443908 GANCQ8TET4 914 aa13.33□□□□□ -0.28
SF1-210ENST00000443908 ALKBH8Q96BT7 664 aaKnown RBP13.33□□□□□ -0.28
SF1-210ENST00000443908 ERLEC1Q96DZ1 483 aa13.33□□□□□ -0.28
SF1-210ENST00000443908 NUS1Q96E22 293 aa13.33□□□□□ -0.28
SF1-210ENST00000443908 SGK2Q9HBY8 427 aa13.33□□□□□ -0.28
SF1-210ENST00000443908 SSU72Q9NP77 194 aaKnown RBP13.33□□□□□ -0.28
SF1-210ENST00000443908 TMEM9BQ9NQ34 198 aa13.33□□□□□ -0.28
SF1-210ENST00000443908 FBXO6Q9NRD1 293 aaPredicted RBP13.33□□□□□ -0.28
SF1-210ENST00000443908 MKS1Q9NXB0 559 aa13.33□□□□□ -0.28
SF1-210ENST00000443908 BCCIPQ9P287 314 aaKnown RBP eCLIP13.33□□□□□ -0.28
SF1-210ENST00000443908 CRLS1Q9UJA2 301 aa13.33□□□□□ -0.28
SF1-210ENST00000443908 NOVA2Q9UNW9 492 aaKnown RBP13.33□□□□□ -0.28
SF1-210ENST00000443908 COMMD10Q9Y6G5 202 aa13.33□□□□□ -0.28
SF1-210ENST00000443908 IGLV3-16A0A075B6K0 115 aa13.32□□□□□ -0.28
SF1-210ENST00000443908 LNP1A1A4G5 178 aa13.32□□□□□ -0.28
SF1-210ENST00000443908 PATE3B3GLJ2 98 aa13.32□□□□□ -0.28
SF1-210ENST00000443908 MMP20O60882 483 aa13.32□□□□□ -0.28
SF1-210ENST00000443908 NDUFS3O75489 264 aa13.32□□□□□ -0.28
SF1-210ENST00000443908 HAUS5O94927 633 aa13.32□□□□□ -0.28
SF1-210ENST00000443908 PROS1P07225 676 aa13.32□□□□□ -0.28
SF1-210ENST00000443908 CD9P21926 228 aa13.32□□□□□ -0.28
SF1-210ENST00000443908 RPS3P23396 243 aaKnown RBP eCLIP13.32□□□□□ -0.289e-7■□□□□ 8.9
SF1-210ENST00000443908 CCNFP41002 786 aa13.32□□□□□ -0.28
SF1-210ENST00000443908 CSRP3P50461 194 aa13.32□□□□□ -0.28
SF1-210ENST00000443908 TPMTP51580 245 aa13.32□□□□□ -0.28
SF1-210ENST00000443908 IRX4P78413 519 aa13.32□□□□□ -0.28
SF1-210ENST00000443908 POU4F1Q01851 419 aa13.32□□□□□ -0.28
SF1-210ENST00000443908 BMPR2Q13873 1038 aa13.32□□□□□ -0.28
SF1-210ENST00000443908 DBN1Q16643 649 aa13.32□□□□□ -0.28
SF1-210ENST00000443908 PMS2CLQ68D20 193 aa13.32□□□□□ -0.28
SF1-210ENST00000443908 FAM45BPQ6NSW5 357 aa13.32□□□□□ -0.28
SF1-210ENST00000443908 CNSTQ6PJW8 725 aa13.32□□□□□ -0.28
SF1-210ENST00000443908 MICALCLQ6ZW33 695 aa13.32□□□□□ -0.28
SF1-210ENST00000443908 TAS2R42Q7RTR8 314 aa13.32□□□□□ -0.28
SF1-210ENST00000443908 EXOC3L1Q86VI1 746 aa13.32□□□□□ -0.28
SF1-210ENST00000443908 SERPINA9Q86WD7 417 aa13.32□□□□□ -0.28
SF1-210ENST00000443908 TRIM69Q86WT6 500 aa13.32□□□□□ -0.28
SF1-210ENST00000443908 HORMAD1Q86X24 394 aa13.32□□□□□ -0.28
SF1-210ENST00000443908 ABCA7Q8IZY2 2146 aa13.32□□□□□ -0.28
SF1-210ENST00000443908 RBFAQ8N0V3 343 aa13.32□□□□□ -0.28
SF1-210ENST00000443908 OR14C36Q8NHC7 312 aa13.32□□□□□ -0.28
SF1-210ENST00000443908 FAM45AQ8TCE6 357 aa13.32□□□□□ -0.28
SF1-210ENST00000443908 HEXDCQ8WVB3 486 aa13.32□□□□□ -0.28
SF1-210ENST00000443908 HMGB4Q8WW32 186 aa13.32□□□□□ -0.28
SF1-210ENST00000443908 RLN3Q8WXF3 142 aa13.32□□□□□ -0.28
SF1-210ENST00000443908 AP2M1Q96CW1 435 aa13.32□□□□□ -0.28
SF1-210ENST00000443908 RIOK2Q9BVS4 552 aaKnown RBP13.32□□□□□ -0.28
SF1-210ENST00000443908 SPATA16Q9BXB7 569 aa13.32□□□□□ -0.28
SF1-210ENST00000443908 C1QTNF2Q9BXJ5 285 aa13.32□□□□□ -0.28
SF1-210ENST00000443908 ZDHHC3Q9NYG2 299 aa13.32□□□□□ -0.28
SF1-210ENST00000443908 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.32□□□□□ -0.28
SF1-210ENST00000443908 ZFR2Q9UPR6 939 aaKnown RBP13.32□□□□□ -0.28
SF1-210ENST00000443908 FNDC3AQ9Y2H6 1198 aaKnown RBP13.32□□□□□ -0.28
SF1-210ENST00000443908 PCDHB1Q9Y5F3 818 aa13.32□□□□□ -0.28
SF1-210ENST00000443908 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.31□□□□□ -0.28
SF1-210ENST00000443908 FAM95CA0A1B0GW59 222 aa13.31□□□□□ -0.28
SF1-210ENST00000443908 C1QTNF9BB2RNN3 333 aa13.31□□□□□ -0.28
SF1-210ENST00000443908 PRMT5O14744 637 aaPredicted RBP13.31□□□□□ -0.28
SF1-210ENST00000443908 ZNF217O75362 1048 aa13.31□□□□□ -0.28
SF1-210ENST00000443908 RFPL1O75677 317 aa13.31□□□□□ -0.28
SF1-210ENST00000443908 PCDH8O95206 1070 aa13.31□□□□□ -0.28
SF1-210ENST00000443908 ESR1P03372 595 aa13.31□□□□□ -0.28
SF1-210ENST00000443908 MT-ND3P03897 115 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms