RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 ARL5AQ9Y689 179 aa20.81■□□□□ 0.92
CDKN3-204ENST00000442975 GPR89AB7ZAQ6 455 aa20.8■□□□□ 0.92
CDKN3-204ENST00000442975 TMX2-CTNND1H3BSU7 103 aa20.8■□□□□ 0.92
CDKN3-204ENST00000442975 STX7O15400 261 aaKnown RBP20.8■□□□□ 0.92
CDKN3-204ENST00000442975 TNFSF15O95150 251 aa20.8■□□□□ 0.92
CDKN3-204ENST00000442975 CCDC175P0C221 793 aa20.8■□□□□ 0.92
CDKN3-204ENST00000442975 GPR89BP0CG08 455 aa20.8■□□□□ 0.92
CDKN3-204ENST00000442975 HGFP14210 728 aa20.8■□□□□ 0.92
CDKN3-204ENST00000442975 ITPKBP27987 946 aa20.8■□□□□ 0.92
CDKN3-204ENST00000442975 CCKBRP32239 447 aa20.8■□□□□ 0.92
CDKN3-204ENST00000442975 SPARCL1Q14515 664 aa20.8■□□□□ 0.92
CDKN3-204ENST00000442975 PTPRCAPQ14761 206 aa20.8■□□□□ 0.92
CDKN3-204ENST00000442975 CHRNA6Q15825 494 aa20.8■□□□□ 0.92
CDKN3-204ENST00000442975 USP53Q70EK8 1073 aa20.8■□□□□ 0.92
CDKN3-204ENST00000442975 RAB11FIP2Q7L804 512 aa20.8■□□□□ 0.92
CDKN3-204ENST00000442975 LRRTM4Q86VH4 590 aa20.8■□□□□ 0.92
CDKN3-204ENST00000442975 TRAPPC5Q8IUR0 188 aa20.8■□□□□ 0.92
CDKN3-204ENST00000442975 SFRP1Q8N474 314 aa20.8■□□□□ 0.92
CDKN3-204ENST00000442975 FBXO39Q8N4B4 442 aa20.8■□□□□ 0.92
CDKN3-204ENST00000442975 TAB3Q8N5C8 712 aaPredicted RBP20.8■□□□□ 0.92
CDKN3-204ENST00000442975 ATG4AQ8WYN0 398 aa20.8■□□□□ 0.92
CDKN3-204ENST00000442975 LRRC45Q96CN5 670 aa20.8■□□□□ 0.92
CDKN3-204ENST00000442975 VPS35Q96QK1 796 aa20.8■□□□□ 0.92
CDKN3-204ENST00000442975 TBL1YQ9BQ87 522 aa20.8■□□□□ 0.92
CDKN3-204ENST00000442975 NUDT22Q9BRQ3 303 aa20.8■□□□□ 0.92
CDKN3-204ENST00000442975 TMEM121Q9BTD3 319 aa20.8■□□□□ 0.92
CDKN3-204ENST00000442975 STN1Q9H668 368 aaKnown RBP20.8■□□□□ 0.92
CDKN3-204ENST00000442975 KCNK4Q9NYG8 393 aa20.8■□□□□ 0.92
CDKN3-204ENST00000442975 DNAJC16Q9Y2G8 782 aa20.8■□□□□ 0.92
CDKN3-204ENST00000442975 LOXL2Q9Y4K0 774 aa20.8■□□□□ 0.92
CDKN3-204ENST00000442975 ITPR1Q14643 2758 aa20.8■□□□□ 0.92
CDKN3-204ENST00000442975 PLD2O14939 933 aa20.79■□□□□ 0.92
CDKN3-204ENST00000442975 PPM1DO15297 605 aa20.79■□□□□ 0.92
CDKN3-204ENST00000442975 B4GAT1O43505 415 aa20.79■□□□□ 0.92
CDKN3-204ENST00000442975 VEGFDO43915 354 aa20.79■□□□□ 0.92
CDKN3-204ENST00000442975 CDK14O94921 469 aa20.79■□□□□ 0.92
CDKN3-204ENST00000442975 CPNE6O95741 557 aa20.79■□□□□ 0.92
CDKN3-204ENST00000442975 JMJD7P0C870 316 aa20.79■□□□□ 0.92
CDKN3-204ENST00000442975 ADRA1AP35348 466 aa20.79■□□□□ 0.92
CDKN3-204ENST00000442975 GPR3P46089 330 aa20.79■□□□□ 0.92
CDKN3-204ENST00000442975 ERVPABLB-1P60509 514 aa20.79■□□□□ 0.92
CDKN3-204ENST00000442975 NFATC2Q13469 925 aa20.79■□□□□ 0.92
CDKN3-204ENST00000442975 NR1D2Q14995 579 aa20.79■□□□□ 0.92
CDKN3-204ENST00000442975 SEPT7Q16181 437 aaKnown RBP20.79■□□□□ 0.92
CDKN3-204ENST00000442975 NKAIN2Q5VXU1 208 aa20.79■□□□□ 0.92
CDKN3-204ENST00000442975 TMPRSS9Q7Z410 1059 aa20.79■□□□□ 0.92
CDKN3-204ENST00000442975 PIM3Q86V86 326 aa20.79■□□□□ 0.92
CDKN3-204ENST00000442975 ZNF248Q8NDW4 579 aa20.79■□□□□ 0.92
CDKN3-204ENST00000442975 TTC25Q96NG3 672 aa20.79■□□□□ 0.92
CDKN3-204ENST00000442975 ALS2CR12Q96Q35 445 aa20.79■□□□□ 0.92
CDKN3-204ENST00000442975 SLC38A3Q99624 504 aa20.79■□□□□ 0.92
CDKN3-204ENST00000442975 PISDQ9UG56 409 aa20.79■□□□□ 0.92
CDKN3-204ENST00000442975 TMPRSS11EQ9UL52 423 aa20.79■□□□□ 0.92
CDKN3-204ENST00000442975 RP1P56715 2156 aa20.78■□□□□ 0.92
CDKN3-204ENST00000442975 C5orf60A6NFR6 353 aa20.78■□□□□ 0.92
CDKN3-204ENST00000442975 C2orf81A6NN90 581 aa20.78■□□□□ 0.92
CDKN3-204ENST00000442975 PDZK1P1A8MUH7 402 aa20.78■□□□□ 0.92
CDKN3-204ENST00000442975 KMOO15229 486 aa20.78■□□□□ 0.92
CDKN3-204ENST00000442975 UGT1A9O60656 530 aa20.78■□□□□ 0.92
CDKN3-204ENST00000442975 PRAMEF1O95521 474 aa20.78■□□□□ 0.92
CDKN3-204ENST00000442975 SLC2A4P14672 509 aa20.78■□□□□ 0.92
CDKN3-204ENST00000442975 UGT1A6P19224 532 aa20.78■□□□□ 0.92
CDKN3-204ENST00000442975 UGT1A1P22309 533 aa20.78■□□□□ 0.92
CDKN3-204ENST00000442975 UGT1A4P22310 534 aa20.78■□□□□ 0.92
CDKN3-204ENST00000442975 UGT1A3P35503 534 aa20.78■□□□□ 0.92
CDKN3-204ENST00000442975 UGT1A5P35504 534 aa20.78■□□□□ 0.92
CDKN3-204ENST00000442975 GDF10P55107 478 aa20.78■□□□□ 0.92
CDKN3-204ENST00000442975 HHEXQ03014 270 aa20.78■□□□□ 0.92
CDKN3-204ENST00000442975 EIF3IQ13347 325 aaKnown RBP20.78■□□□□ 0.92
CDKN3-204ENST00000442975 JAMLQ86YT9 394 aa20.78■□□□□ 0.92
CDKN3-204ENST00000442975 SLITRK4Q8IW52 837 aa20.78■□□□□ 0.92
CDKN3-204ENST00000442975 SLC35B2Q8TB61 432 aa20.78■□□□□ 0.92
CDKN3-204ENST00000442975 CRELD1Q96HD1 420 aa20.78■□□□□ 0.92
CDKN3-204ENST00000442975 PRR11Q96HE9 360 aaPredicted RBP20.78■□□□□ 0.92
CDKN3-204ENST00000442975 SLC46A1Q96NT5 459 aa20.78■□□□□ 0.92
CDKN3-204ENST00000442975 ZCCHC2Q9C0B9 1178 aaKnown RBP20.78■□□□□ 0.92
CDKN3-204ENST00000442975 SEMA6CQ9H3T2 930 aa20.78■□□□□ 0.92
CDKN3-204ENST00000442975 UGT1A7Q9HAW7 530 aa20.78■□□□□ 0.92
CDKN3-204ENST00000442975 UGT1A10Q9HAW8 530 aa20.78■□□□□ 0.92
CDKN3-204ENST00000442975 UGT1A8Q9HAW9 530 aa20.78■□□□□ 0.92
CDKN3-204ENST00000442975 PRDM8Q9NQV8 689 aa20.78■□□□□ 0.92
CDKN3-204ENST00000442975 MYLKQ15746 1914 aa20.78■□□□□ 0.92
CDKN3-204ENST00000442975 COL27A1Q8IZC6 1860 aaPredicted RBP20.77■□□□□ 0.92
CDKN3-204ENST00000442975 NRDCO43847 1150 aa20.77■□□□□ 0.92
CDKN3-204ENST00000442975 PPFIA2O75334 1257 aa20.77■□□□□ 0.92
CDKN3-204ENST00000442975 ITGA2BP08514 1039 aa20.77■□□□□ 0.92
CDKN3-204ENST00000442975 F3P13726 295 aa20.77■□□□□ 0.92
CDKN3-204ENST00000442975 LPOP22079 712 aaPredicted RBP20.77■□□□□ 0.92
CDKN3-204ENST00000442975 CD1CP29017 333 aa20.77■□□□□ 0.92
CDKN3-204ENST00000442975 AKT1P31749 480 aa20.77■□□□□ 0.92
CDKN3-204ENST00000442975 MAPK9P45984 424 aa20.77■□□□□ 0.92
CDKN3-204ENST00000442975 FASLGP48023 281 aa20.77■□□□□ 0.92
CDKN3-204ENST00000442975 ITGA9Q13797 1035 aa20.77■□□□□ 0.92
CDKN3-204ENST00000442975 RPS6KA1Q15418 735 aa20.77■□□□□ 0.92
CDKN3-204ENST00000442975 TAF1AQ15573 450 aaPredicted RBP20.77■□□□□ 0.92
CDKN3-204ENST00000442975 RANBP10Q6VN20 620 aa20.77■□□□□ 0.92
CDKN3-204ENST00000442975 LRRC8AQ8IWT6 810 aa20.77■□□□□ 0.92
CDKN3-204ENST00000442975 OR4K2Q8NGD2 314 aa20.77■□□□□ 0.92
CDKN3-204ENST00000442975 KCNE4Q8WWG9 221 aa20.77■□□□□ 0.92
CDKN3-204ENST00000442975 AHCYL2Q96HN2 611 aaKnown RBP20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 150.4 ms