RNA–Protein interactions for RNA: ENST00000442510.6

PTPRC-209, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRC, Length 5,164 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-209ENST00000442510 ERO1BQ86YB8 467 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 TRAM1L1Q8N609 369 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 KIAA0895Q8NCT3 520 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 ZNF248Q8NDW4 579 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 OR4D6Q8NGJ1 314 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 TCP10LQ8TDR4 215 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 FAM122AQ96E09 287 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 JPH4Q96JJ6 628 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 COQ10AQ96MF6 247 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 GAD1Q99259 594 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 FUZQ9BT04 418 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 NMUR2Q9GZQ4 415 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 MIR1-1HGQ9H1L0 117 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 C11orf49Q9H6J7 331 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 WDR41Q9HAD4 459 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 ZDHHC7Q9NXF8 308 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 GMPR2Q9P2T1 348 aaKnown RBP5.56□□□□□ -1.52
PTPRC-209ENST00000442510 RNF24Q9Y225 148 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 POMPQ9Y244 141 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 EIF4G1Q04637 1599 aaKnown RBP5.56□□□□□ -1.52
PTPRC-209ENST00000442510 KIF21BO75037 1637 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 ZNF608Q9ULD9 1512 aaPredicted RBP5.56□□□□□ -1.52
PTPRC-209ENST00000442510 FGD6Q6ZV73 1430 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 PNMA6EA0A0J9YXQ4 647 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 MYOCOSA0A1B0GUC4 107 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 FAM237BA0A1B0GVD1 139 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 B4E171 279 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 H3BNH8 94 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 AIPO00170 330 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 PGRMC2O15173 223 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 YY2O15391 372 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 UPK1BO75841 260 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 BEST1O76090 585 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 SNAPINO95295 136 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 LYPLA2O95372 231 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 LY86O95711 162 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 SRGNP10124 158 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 ERCC2P18074 760 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 DNASE1P24855 282 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 ADRA1DP25100 572 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 PCSK6P29122 969 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 RGS1Q08116 209 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 SLC10A7Q0GE19 358 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 MTMR2Q13614 643 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 PCBP1Q15365 356 aaKnown RBP eCLIP5.56□□□□□ -1.52
PTPRC-209ENST00000442510 DHCR24Q15392 516 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 BAK1Q16611 211 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 LBHQ53QV2 105 aaPredicted RBP5.56□□□□□ -1.52
PTPRC-209ENST00000442510 PIK3R6Q5UE93 754 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 SULT6B1Q6IMI4 303 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 MFSD5Q6N075 450 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 VSTM1Q6UX27 236 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 THAP5Q7Z6K1 395 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 TMCO2Q7Z6W1 182 aaPredicted RBP5.56□□□□□ -1.52
PTPRC-209ENST00000442510 RIOX2Q8IUF8 465 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 GTF3C2Q8WUA4 911 aaPredicted RBP5.56□□□□□ -1.52
PTPRC-209ENST00000442510 GTPBP3Q969Y2 492 aaKnown RBP5.56□□□□□ -1.52
PTPRC-209ENST00000442510 RELTQ969Z4 430 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 AURKBQ96GD4 344 aaPredicted RBP5.56□□□□□ -1.52
PTPRC-209ENST00000442510 CSPG4P5Q96PW8 444 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 PANX3Q96QZ0 392 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 RBM4BQ9BQ04 359 aaKnown RBP5.56□□□□□ -1.52
PTPRC-209ENST00000442510 TCF25Q9BQ70 676 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 SPATA5L1Q9BVQ7 753 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 RBM4Q9BWF3 364 aaKnown RBP5.56□□□□□ -1.52
PTPRC-209ENST00000442510 WNT8AQ9H1J5 351 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 DCSTAMPQ9H295 470 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 COQ10BQ9H8M1 238 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 IL1RAPQ9NPH3 570 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 WHRNQ9P202 907 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 RPS6KA6Q9UK32 745 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 SAMHD1Q9Y3Z3 626 aaKnown RBP5.56□□□□□ -1.52
PTPRC-209ENST00000442510 PNPLA6Q8IY17 1366 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 A0A1B0GVM2 712 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 LOC390937A0A1W2PQ73 354 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 FANCGO15287 622 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 PTP4A3O75365 173 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 RGS9O75916 674 aaPredicted RBP5.56□□□□□ -1.52
PTPRC-209ENST00000442510 PRAMEF1O95521 474 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 CNOT4O95628 575 aaKnown RBP5.56□□□□□ -1.52
PTPRC-209ENST00000442510 PFKMP08237 780 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 GTF2E2P29084 291 aaKnown RBP5.56□□□□□ -1.52
PTPRC-209ENST00000442510 S100GP29377 79 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 GRK4P32298 578 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 PCGF2P35227 344 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 ZNF280AP59817 542 aaPredicted RBP5.56□□□□□ -1.52
PTPRC-209ENST00000442510 ARF3P61204 181 aaPredicted RBP5.56□□□□□ -1.52
PTPRC-209ENST00000442510 ARF1P84077 181 aaKnown RBP5.56□□□□□ -1.52
PTPRC-209ENST00000442510 GRIK2Q13002 908 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 GPS1Q13098 491 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 KLHDC7AQ5VTJ3 777 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 LIN54Q6MZP7 749 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 BRINP3Q76B58 766 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 NIPA1Q7RTP0 329 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 PXKQ7Z7A4 578 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 TMEM126BQ8IUX1 230 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 SLC9A9Q8IVB4 645 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 GPALPP1Q8IXQ4 340 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 MFSD2AQ8NA29 543 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 KBTBD3Q8NAB2 608 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms