RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 KLHL3Q9UH77 587 aa11.64□□□□□ -0.55
TTC28-203ENST00000442232 CNOT6Q9ULM6 557 aaKnown RBP11.64□□□□□ -0.55
TTC28-203ENST00000442232 B3GALT1Q9Y5Z6 326 aa11.64□□□□□ -0.55
TTC28-203ENST00000442232 ZNF106Q9H2Y7 1883 aaKnown RBP11.63□□□□□ -0.55
TTC28-203ENST00000442232 LILRA5A6NI73 299 aa11.63□□□□□ -0.55
TTC28-203ENST00000442232 ZNF891A8MT65 544 aaPredicted RBP11.63□□□□□ -0.55
TTC28-203ENST00000442232 PDZK1P1A8MUH7 402 aa11.63□□□□□ -0.55
TTC28-203ENST00000442232 KMOO15229 486 aa11.63□□□□□ -0.55
TTC28-203ENST00000442232 CAPN5O15484 640 aaPredicted RBP11.63□□□□□ -0.55
TTC28-203ENST00000442232 MTSS1O43312 755 aa11.63□□□□□ -0.55
TTC28-203ENST00000442232 VEGFDO43915 354 aa11.63□□□□□ -0.55
TTC28-203ENST00000442232 RAD1O60671 282 aa11.63□□□□□ -0.55
TTC28-203ENST00000442232 PPFIA2O75334 1257 aa11.63□□□□□ -0.55
TTC28-203ENST00000442232 PMPCBO75439 489 aa11.63□□□□□ -0.55
TTC28-203ENST00000442232 NDST3O95803 873 aa11.63□□□□□ -0.55
TTC28-203ENST00000442232 EML2O95834 649 aa11.63□□□□□ -0.55
TTC28-203ENST00000442232 VIPP01282 170 aa11.63□□□□□ -0.55
TTC28-203ENST00000442232 ZNF8P17098 575 aaPredicted RBP11.63□□□□□ -0.55
TTC28-203ENST00000442232 ANKS6Q68DC2 871 aa11.63□□□□□ -0.55
TTC28-203ENST00000442232 CRTC3Q6UUV7 619 aa11.63□□□□□ -0.55
TTC28-203ENST00000442232 CNTD1Q8N815 330 aa11.63□□□□□ -0.55
TTC28-203ENST00000442232 GDAP1Q8TB36 358 aa11.63□□□□□ -0.55
TTC28-203ENST00000442232 TFB1MQ8WVM0 346 aaKnown RBP11.63□□□□□ -0.55
TTC28-203ENST00000442232 NKD1Q969G9 470 aa11.63□□□□□ -0.55
TTC28-203ENST00000442232 TTC25Q96NG3 672 aa11.63□□□□□ -0.55
TTC28-203ENST00000442232 OLFM3Q96PB7 478 aa11.63□□□□□ -0.55
TTC28-203ENST00000442232 TRIB3Q96RU7 358 aa11.63□□□□□ -0.55
TTC28-203ENST00000442232 GLOD4Q9HC38 313 aa11.63□□□□□ -0.55
TTC28-203ENST00000442232 TRIM39Q9HCM9 518 aa11.63□□□□□ -0.55
TTC28-203ENST00000442232 ARFGAP3Q9NP61 516 aa11.63□□□□□ -0.55
TTC28-203ENST00000442232 OCIAD1Q9NX40 245 aa11.63□□□□□ -0.55
TTC28-203ENST00000442232 NFKBIL1Q9UBC1 381 aaPredicted RBP11.63□□□□□ -0.55
TTC28-203ENST00000442232 CPNE7Q9UBL6 633 aa11.63□□□□□ -0.55
TTC28-203ENST00000442232 INTUQ9ULD6 942 aa11.63□□□□□ -0.55
TTC28-203ENST00000442232 C3orf70A6NLC5 250 aaPredicted RBP11.62□□□□□ -0.55
TTC28-203ENST00000442232 AKR1B15C9JRZ8 316 aaPredicted RBP11.62□□□□□ -0.55
TTC28-203ENST00000442232 PSTPIP1O43586 416 aa11.62□□□□□ -0.55
TTC28-203ENST00000442232 FAM87AP0C7U9 286 aa11.62□□□□□ -0.55
TTC28-203ENST00000442232 ZNF7P17097 686 aaPredicted RBP11.62□□□□□ -0.55
TTC28-203ENST00000442232 AMD1P17707 334 aa11.62□□□□□ -0.55
TTC28-203ENST00000442232 UGT1A3P35503 534 aa11.62□□□□□ -0.55
TTC28-203ENST00000442232 CLCNKAP51800 687 aa11.62□□□□□ -0.55
TTC28-203ENST00000442232 MC2RQ01718 297 aa11.62□□□□□ -0.55
TTC28-203ENST00000442232 SEPT7Q16181 437 aaKnown RBP11.62□□□□□ -0.55
TTC28-203ENST00000442232 TBR1Q16650 682 aa11.62□□□□□ -0.55
TTC28-203ENST00000442232 LINC00303Q3SY05 128 aa11.62□□□□□ -0.55
TTC28-203ENST00000442232 TEX44Q53QW1 395 aa11.62□□□□□ -0.55
TTC28-203ENST00000442232 KAZNQ674X7 775 aa11.62□□□□□ -0.55
TTC28-203ENST00000442232 ADGRG6Q86SQ4 1221 aa11.62□□□□□ -0.55
TTC28-203ENST00000442232 CCDC50Q8IVM0 306 aa11.62□□□□□ -0.55
TTC28-203ENST00000442232 NLGN4XQ8N0W4 816 aa11.62□□□□□ -0.55
TTC28-203ENST00000442232 EXD3Q8N9H8 876 aa11.62□□□□□ -0.55
TTC28-203ENST00000442232 GPR26Q8NDV2 337 aa11.62□□□□□ -0.55
TTC28-203ENST00000442232 NLGN4YQ8NFZ3 816 aaPredicted RBP11.62□□□□□ -0.55
TTC28-203ENST00000442232 PMEPA1Q969W9 287 aa11.62□□□□□ -0.55
TTC28-203ENST00000442232 PLEKHG4BQ96PX9 1271 aa11.62□□□□□ -0.55
TTC28-203ENST00000442232 CHP1Q99653 195 aa11.62□□□□□ -0.55
TTC28-203ENST00000442232 FERMT1Q9BQL6 677 aa11.62□□□□□ -0.55
TTC28-203ENST00000442232 TIMM29Q9BSF4 260 aa11.62□□□□□ -0.55
TTC28-203ENST00000442232 ZCCHC2Q9C0B9 1178 aaKnown RBP11.62□□□□□ -0.55
TTC28-203ENST00000442232 TRIT1Q9H3H1 467 aaKnown RBP11.62□□□□□ -0.55
TTC28-203ENST00000442232 GPN2Q9H9Y4 310 aaPredicted RBP11.62□□□□□ -0.55
TTC28-203ENST00000442232 UCK1Q9HA47 277 aa11.62□□□□□ -0.55
TTC28-203ENST00000442232 LUC7LQ9NQ29 371 aaKnown RBP11.62□□□□□ -0.55
TTC28-203ENST00000442232 PRDM8Q9NQV8 689 aa11.62□□□□□ -0.55
TTC28-203ENST00000442232 KLHL8Q9P2G9 620 aaPredicted RBP11.62□□□□□ -0.55
TTC28-203ENST00000442232 PDP2Q9P2J9 529 aa11.62□□□□□ -0.55
TTC28-203ENST00000442232 FAM153AQ9UHL3 310 aa11.62□□□□□ -0.55
TTC28-203ENST00000442232 PCYT1BQ9Y5K3 369 aaPredicted RBP11.62□□□□□ -0.55
TTC28-203ENST00000442232 SPTA1P02549 2419 aa11.61□□□□□ -0.55
TTC28-203ENST00000442232 A6NCN8 305 aa11.61□□□□□ -0.55
TTC28-203ENST00000442232 POLR1CO15160 346 aaPredicted RBP11.61□□□□□ -0.55
TTC28-203ENST00000442232 CDK14O94921 469 aa11.61□□□□□ -0.55
TTC28-203ENST00000442232 MT-CYBP00156 380 aaPredicted RBP11.61□□□□□ -0.55
TTC28-203ENST00000442232 LIFP15018 202 aa11.61□□□□□ -0.55
TTC28-203ENST00000442232 BPIP17213 487 aa11.61□□□□□ -0.55
TTC28-203ENST00000442232 COMTP21964 271 aa11.61□□□□□ -0.55
TTC28-203ENST00000442232 IDSP22304 550 aa11.61□□□□□ -0.55
TTC28-203ENST00000442232 PTPN3P26045 913 aa11.61□□□□□ -0.55
TTC28-203ENST00000442232 MAP4P27816 1152 aaKnown RBP11.61□□□□□ -0.55
TTC28-203ENST00000442232 HALP42357 657 aa11.61□□□□□ -0.55
TTC28-203ENST00000442232 CYP4F2P78329 520 aa11.61□□□□□ -0.55
TTC28-203ENST00000442232 TFDP3Q5H9I0 405 aa11.61□□□□□ -0.55
TTC28-203ENST00000442232 ZNF648Q5T619 568 aaPredicted RBP11.61□□□□□ -0.55
TTC28-203ENST00000442232 ZDHHC20Q5W0Z9 365 aa11.61□□□□□ -0.55
TTC28-203ENST00000442232 CYB5D1Q6P9G0 228 aa11.61□□□□□ -0.55
TTC28-203ENST00000442232 BORAQ6PGQ7 559 aa11.61□□□□□ -0.55
TTC28-203ENST00000442232 MFSD7Q6UXD7 560 aa11.61□□□□□ -0.55
TTC28-203ENST00000442232 ARHGAP22Q7Z5H3 698 aa11.61□□□□□ -0.55
TTC28-203ENST00000442232 TMC3Q7Z5M5 1100 aa11.61□□□□□ -0.55
TTC28-203ENST00000442232 TRAPPC5Q8IUR0 188 aa11.61□□□□□ -0.55
TTC28-203ENST00000442232 RBM12BQ8IXT5 1001 aaKnown RBP11.61□□□□□ -0.55
TTC28-203ENST00000442232 SPATA22Q8NHS9 363 aa11.61□□□□□ -0.55
TTC28-203ENST00000442232 P3H4Q92791 437 aa11.61□□□□□ -0.55
TTC28-203ENST00000442232 CXorf40BQ96DE9 158 aa11.61□□□□□ -0.55
TTC28-203ENST00000442232 RTP4Q96DX8 246 aa11.61□□□□□ -0.55
TTC28-203ENST00000442232 RBM41Q96IZ5 413 aaKnown RBP11.61□□□□□ -0.55
TTC28-203ENST00000442232 CATSPER2Q96P56 530 aa11.61□□□□□ -0.55
TTC28-203ENST00000442232 CTRCQ99895 268 aa11.61□□□□□ -0.55
TTC28-203ENST00000442232 TBC1D10AQ9BXI6 508 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms