RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 ARHGEF7Q14155 803 aa13.05□□□□□ -0.32
CPSF4-206ENST00000441580 SQLEQ14534 574 aa13.05□□□□□ -0.32
CPSF4-206ENST00000441580 EIF4HQ15056 248 aaKnown RBP13.05□□□□□ -0.32
CPSF4-206ENST00000441580 PDGFRLQ15198 375 aa13.05□□□□□ -0.32
CPSF4-206ENST00000441580 MAPRE2Q15555 327 aa13.05□□□□□ -0.32
CPSF4-206ENST00000441580 RAB30Q15771 203 aa13.05□□□□□ -0.32
CPSF4-206ENST00000441580 LSM12Q3MHD2 195 aaKnown RBP13.05□□□□□ -0.32
CPSF4-206ENST00000441580 SETMARQ53H47 684 aaPredicted RBP13.05□□□□□ -0.32
CPSF4-206ENST00000441580 UNC50Q53HI1 259 aa13.05□□□□□ -0.32
CPSF4-206ENST00000441580 ANKS6Q68DC2 871 aa13.05□□□□□ -0.32
CPSF4-206ENST00000441580 FRA10AC1Q70Z53 315 aa13.05□□□□□ -0.32
CPSF4-206ENST00000441580 ADGRD2Q7Z7M1 963 aa13.05□□□□□ -0.32
CPSF4-206ENST00000441580 HOMEZQ8IX15 550 aa13.05□□□□□ -0.32
CPSF4-206ENST00000441580 NPAS3Q8IXF0 933 aa13.05□□□□□ -0.32
CPSF4-206ENST00000441580 CPNE9Q8IYJ1 553 aa13.05□□□□□ -0.32
CPSF4-206ENST00000441580 ADGRG2Q8IZP9 1017 aa13.05□□□□□ -0.32
CPSF4-206ENST00000441580 MYO1HQ8N1T3 1032 aa13.05□□□□□ -0.32
CPSF4-206ENST00000441580 RBM15BQ8NDT2 890 aaKnown RBP13.05□□□□□ -0.32
CPSF4-206ENST00000441580 OR2A12Q8NGT7 310 aa13.05□□□□□ -0.32
CPSF4-206ENST00000441580 CEP70Q8NHQ1 597 aa13.05□□□□□ -0.32
CPSF4-206ENST00000441580 ITFG1Q8TB96 612 aa13.05□□□□□ -0.32
CPSF4-206ENST00000441580 DTX3LQ8TDB6 740 aa13.05□□□□□ -0.32
CPSF4-206ENST00000441580 BPIFB1Q8TDL5 484 aa13.05□□□□□ -0.32
CPSF4-206ENST00000441580 FRS2Q8WU20 508 aa13.05□□□□□ -0.32
CPSF4-206ENST00000441580 FUBP1Q96AE4 644 aaKnown RBP13.05□□□□□ -0.32
CPSF4-206ENST00000441580 FAM136AQ96C01 138 aa13.05□□□□□ -0.32
CPSF4-206ENST00000441580 MRGPRX3Q96LB0 322 aa13.05□□□□□ -0.32
CPSF4-206ENST00000441580 NUSAP1Q9BXS6 441 aaKnown RBP13.05□□□□□ -0.32
CPSF4-206ENST00000441580 NDE1Q9NXR1 346 aa13.05□□□□□ -0.32
CPSF4-206ENST00000441580 ZDHHC3Q9NYG2 299 aa13.05□□□□□ -0.32
CPSF4-206ENST00000441580 GDE1Q9NZC3 331 aa13.05□□□□□ -0.32
CPSF4-206ENST00000441580 DKK3Q9UBP4 350 aa13.05□□□□□ -0.32
CPSF4-206ENST00000441580 B4GALT6Q9UBX8 382 aa13.05□□□□□ -0.32
CPSF4-206ENST00000441580 MTF2Q9Y483 593 aaPredicted RBP13.05□□□□□ -0.32
CPSF4-206ENST00000441580 C2orf16Q68DN1 1984 aa13.04□□□□□ -0.32
CPSF4-206ENST00000441580 SKAP2O75563 359 aaPredicted RBP13.04□□□□□ -0.32
CPSF4-206ENST00000441580 C1SP09871 688 aa13.04□□□□□ -0.32
CPSF4-206ENST00000441580 CBSLP0DN79 551 aa13.04□□□□□ -0.32
CPSF4-206ENST00000441580 CHRM1P11229 460 aaPredicted RBP13.04□□□□□ -0.32
CPSF4-206ENST00000441580 COX4I1P13073 169 aa13.04□□□□□ -0.32
CPSF4-206ENST00000441580 LHCGRP22888 699 aa13.04□□□□□ -0.32
CPSF4-206ENST00000441580 DGKAP23743 735 aa13.04□□□□□ -0.32
CPSF4-206ENST00000441580 FSHRP23945 695 aa13.04□□□□□ -0.32
CPSF4-206ENST00000441580 CCND1P24385 295 aa13.04□□□□□ -0.32
CPSF4-206ENST00000441580 PIK3R1P27986 724 aa13.04□□□□□ -0.32
CPSF4-206ENST00000441580 EPHA3P29320 983 aa13.04□□□□□ -0.32
CPSF4-206ENST00000441580 EEF1DP29692 281 aaKnown RBP13.04□□□□□ -0.32
CPSF4-206ENST00000441580 CBSP35520 551 aa13.04□□□□□ -0.32
CPSF4-206ENST00000441580 PGM1P36871 562 aa13.04□□□□□ -0.32
CPSF4-206ENST00000441580 NRIP1P48552 1158 aa13.04□□□□□ -0.32
CPSF4-206ENST00000441580 ATP4BP51164 291 aa13.04□□□□□ -0.32
CPSF4-206ENST00000441580 BTKQ06187 659 aa13.04□□□□□ -0.32
CPSF4-206ENST00000441580 PTPRRQ15256 657 aa13.04□□□□□ -0.32
CPSF4-206ENST00000441580 CHRNA6Q15825 494 aa13.04□□□□□ -0.32
CPSF4-206ENST00000441580 PFKFB4Q16877 469 aa13.04□□□□□ -0.32
CPSF4-206ENST00000441580 TRMT5Q32P41 509 aaKnown RBP13.04□□□□□ -0.32
CPSF4-206ENST00000441580 C9orf50Q5SZB4 431 aa13.04□□□□□ -0.32
CPSF4-206ENST00000441580 NXNQ6DKJ4 435 aa13.04□□□□□ -0.32
CPSF4-206ENST00000441580 RBM23Q86U06 439 aaKnown RBP13.04□□□□□ -0.32
CPSF4-206ENST00000441580 TSPAN33Q86UF1 283 aa13.04□□□□□ -0.32
CPSF4-206ENST00000441580 GPSM1Q86YR5 675 aa13.04□□□□□ -0.32
CPSF4-206ENST00000441580 CHCHD4Q8N4Q1 142 aa13.04□□□□□ -0.32
CPSF4-206ENST00000441580 ZBTB2Q8N680 514 aa13.04□□□□□ -0.32
CPSF4-206ENST00000441580 SMARCD2Q92925 531 aa13.04□□□□□ -0.32
CPSF4-206ENST00000441580 VOPP1Q96AW1 172 aa13.04□□□□□ -0.32
CPSF4-206ENST00000441580 C19orf60Q96EN9 201 aa13.04□□□□□ -0.32
CPSF4-206ENST00000441580 ASB16Q96NS5 453 aa13.04□□□□□ -0.32
CPSF4-206ENST00000441580 COPS8Q99627 209 aa13.04□□□□□ -0.32
CPSF4-206ENST00000441580 RTKNQ9BST9 563 aa13.04□□□□□ -0.32
CPSF4-206ENST00000441580 SHCBP1LQ9BZQ2 653 aa13.04□□□□□ -0.32
CPSF4-206ENST00000441580 CIPCQ9C0C6 399 aa13.04□□□□□ -0.32
CPSF4-206ENST00000441580 LINC00597Q9H2U6 94 aa13.04□□□□□ -0.32
CPSF4-206ENST00000441580 WDR55Q9H6Y2 383 aaPredicted RBP13.04□□□□□ -0.32
CPSF4-206ENST00000441580 BRD9Q9H8M2 597 aa13.04□□□□□ -0.32
CPSF4-206ENST00000441580 PFDN4Q9NQP4 134 aa13.04□□□□□ -0.32
CPSF4-206ENST00000441580 IL36AQ9UHA7 158 aa13.04□□□□□ -0.32
CPSF4-206ENST00000441580 PLA2G4CQ9UP65 541 aa13.04□□□□□ -0.32
CPSF4-206ENST00000441580 WASF2Q9Y6W5 498 aa13.04□□□□□ -0.32
CPSF4-206ENST00000441580 DOCK6Q96HP0 2047 aa13.03□□□□□ -0.32
CPSF4-206ENST00000441580 IGLV3-16A0A075B6K0 115 aa13.03□□□□□ -0.32
CPSF4-206ENST00000441580 RGSL1A5PLK6 1076 aa13.03□□□□□ -0.32
CPSF4-206ENST00000441580 A8MUI8 341 aa13.03□□□□□ -0.32
CPSF4-206ENST00000441580 GRXCR1A8MXD5 290 aa13.03□□□□□ -0.32
CPSF4-206ENST00000441580 TMEM233B4DJY2 109 aa13.03□□□□□ -0.32
CPSF4-206ENST00000441580 CFAP99D6REC4 459 aa13.03□□□□□ -0.32
CPSF4-206ENST00000441580 CDC7O00311 574 aa13.03□□□□□ -0.32
CPSF4-206ENST00000441580 GIPC1O14908 333 aa13.03□□□□□ -0.32
CPSF4-206ENST00000441580 RAD51BO15315 384 aa13.03□□□□□ -0.32
CPSF4-206ENST00000441580 GPR39O43194 453 aa13.03□□□□□ -0.32
CPSF4-206ENST00000441580 VPS4BO75351 444 aa13.03□□□□□ -0.32
CPSF4-206ENST00000441580 TM7SF2O76062 418 aa13.03□□□□□ -0.32
CPSF4-206ENST00000441580 THRAP10827 490 aa13.03□□□□□ -0.32
CPSF4-206ENST00000441580 ENO3P13929 434 aaPredicted RBP13.03□□□□□ -0.32
CPSF4-206ENST00000441580 XPAP23025 273 aaPredicted RBP13.03□□□□□ -0.32
CPSF4-206ENST00000441580 SPINT3P49223 89 aa13.03□□□□□ -0.32
CPSF4-206ENST00000441580 GEN1Q17RS7 908 aa13.03□□□□□ -0.32
CPSF4-206ENST00000441580 KANK2Q63ZY3 851 aa13.03□□□□□ -0.32
CPSF4-206ENST00000441580 FAM109BQ6ICB4 259 aaPredicted RBP13.03□□□□□ -0.32
CPSF4-206ENST00000441580 DPPA4Q7L190 304 aa13.03□□□□□ -0.32
CPSF4-206ENST00000441580 ETFBKMTQ8IXQ9 262 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms