RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 GNASQ5JWF2 1037 aa16.69■□□□□ 0.26
PMS1-213ENST00000441310 C6orf141Q5SZD1 244 aa16.69■□□□□ 0.26
PMS1-213ENST00000441310 ELMOD2Q8IZ81 293 aa16.69■□□□□ 0.26
PMS1-213ENST00000441310 NATD1Q8N6N6 113 aa16.69■□□□□ 0.26
PMS1-213ENST00000441310 RHOXF1Q8NHV9 184 aa16.69■□□□□ 0.26
PMS1-213ENST00000441310 DNAJB14Q8TBM8 379 aa16.69■□□□□ 0.26
PMS1-213ENST00000441310 SLC35F5Q8WV83 523 aa16.69■□□□□ 0.26
PMS1-213ENST00000441310 LPPQ93052 612 aa16.69■□□□□ 0.26
PMS1-213ENST00000441310 RABL2AQ9UBK7 228 aaPredicted RBP16.69■□□□□ 0.26
PMS1-213ENST00000441310 IPPQ9Y573 584 aa16.69■□□□□ 0.26
PMS1-213ENST00000441310 A0A0J9YYE9 177 aa16.69■□□□□ 0.26
PMS1-213ENST00000441310 TTC24A2A3L6 582 aaPredicted RBP16.69■□□□□ 0.26
PMS1-213ENST00000441310 ZNF99A8MXY4 864 aaPredicted RBP16.69■□□□□ 0.26
PMS1-213ENST00000441310 GPIP06744 558 aa16.69■□□□□ 0.26
PMS1-213ENST00000441310 THRBP10828 461 aa16.69■□□□□ 0.26
PMS1-213ENST00000441310 TCF3P15923 654 aa16.69■□□□□ 0.26
PMS1-213ENST00000441310 ARSFP54793 590 aa16.69■□□□□ 0.26
PMS1-213ENST00000441310 SLC6A3Q01959 620 aa16.69■□□□□ 0.26
PMS1-213ENST00000441310 SLX4IPQ5VYV7 408 aa16.69■□□□□ 0.26
PMS1-213ENST00000441310 NODALQ96S42 347 aa16.69■□□□□ 0.26
PMS1-213ENST00000441310 C8orf4Q9NR00 106 aa16.69■□□□□ 0.26
PMS1-213ENST00000441310 UBQLN1Q9UMX0 589 aaKnown RBP16.69■□□□□ 0.26
PMS1-213ENST00000441310 PCM1Q15154 2024 aa16.69■□□□□ 0.26
PMS1-213ENST00000441310 ZCWPW2A0A1B0GU75 182 aa16.68■□□□□ 0.26
PMS1-213ENST00000441310 ANGPT2O15123 496 aa16.68■□□□□ 0.26
PMS1-213ENST00000441310 TPH1P17752 444 aa16.68■□□□□ 0.26
PMS1-213ENST00000441310 BST2Q10589 180 aaKnown RBP16.68■□□□□ 0.26
PMS1-213ENST00000441310 BNIP2Q12982 314 aa16.68■□□□□ 0.26
PMS1-213ENST00000441310 FRG1Q14331 258 aaKnown RBP16.68■□□□□ 0.26
PMS1-213ENST00000441310 RABL3Q5HYI8 236 aa16.68■□□□□ 0.26
PMS1-213ENST00000441310 UBXN11Q5T124 520 aa16.68■□□□□ 0.26
PMS1-213ENST00000441310 CERCAMQ5T4B2 595 aa16.68■□□□□ 0.26
PMS1-213ENST00000441310 ROPN1LQ96C74 230 aa16.68■□□□□ 0.26
PMS1-213ENST00000441310 CITED4Q96RK1 184 aa16.68■□□□□ 0.26
PMS1-213ENST00000441310 TMPRSS4Q9NRS4 437 aa16.68■□□□□ 0.26
PMS1-213ENST00000441310 VANGL2Q9ULK5 521 aa16.68■□□□□ 0.26
PMS1-213ENST00000441310 USP22Q9UPT9 525 aa16.68■□□□□ 0.26
PMS1-213ENST00000441310 CAB39Q9Y376 341 aaPredicted RBP16.68■□□□□ 0.26
PMS1-213ENST00000441310 SCN4AP35499 1836 aa16.68■□□□□ 0.26
PMS1-213ENST00000441310 C17orf102A2RUQ5 167 aa16.68■□□□□ 0.26
PMS1-213ENST00000441310 SLC22A1O15245 554 aa16.68■□□□□ 0.26
PMS1-213ENST00000441310 CLCNKBP51801 687 aa16.68■□□□□ 0.26
PMS1-213ENST00000441310 IFRD2Q12894 506 aaPredicted RBP16.68■□□□□ 0.26
PMS1-213ENST00000441310 CTU2Q2VPK5 515 aaKnown RBP16.68■□□□□ 0.26
PMS1-213ENST00000441310 CCBE1Q6UXH8 406 aaPredicted RBP16.68■□□□□ 0.26
PMS1-213ENST00000441310 HACD2Q6Y1H2 254 aa16.68■□□□□ 0.26
PMS1-213ENST00000441310 RNF135Q8IUD6 432 aa16.68■□□□□ 0.26
PMS1-213ENST00000441310 CHDHQ8NE62 594 aaPredicted RBP16.68■□□□□ 0.26
PMS1-213ENST00000441310 ELMO1Q92556 727 aa16.68■□□□□ 0.26
PMS1-213ENST00000441310 P2RY11Q96G91 374 aa16.68■□□□□ 0.26
PMS1-213ENST00000441310 ZIC5Q96T25 663 aa16.68■□□□□ 0.26
PMS1-213ENST00000441310 TOR3AQ9H497 397 aa16.68■□□□□ 0.26
PMS1-213ENST00000441310 PLSCR3Q9NRY6 295 aa16.68■□□□□ 0.26
PMS1-213ENST00000441310 EIF3LQ9Y262 564 aaKnown RBP16.68■□□□□ 0.26
PMS1-213ENST00000441310 SYCE1LA8MT33 242 aa16.68■□□□□ 0.26
PMS1-213ENST00000441310 GABARAPO95166 117 aa16.68■□□□□ 0.26
PMS1-213ENST00000441310 APLP1P51693 650 aa16.68■□□□□ 0.26
PMS1-213ENST00000441310 GALK2Q01415 458 aa16.68■□□□□ 0.26
PMS1-213ENST00000441310 ATAD3CQ5T2N8 411 aa16.68■□□□□ 0.26
PMS1-213ENST00000441310 LYPD8Q6UX82 237 aa16.68■□□□□ 0.26
PMS1-213ENST00000441310 PID1Q7Z2X4 250 aa16.68■□□□□ 0.26
PMS1-213ENST00000441310 CTU1Q7Z7A3 348 aaKnown RBP16.68■□□□□ 0.26
PMS1-213ENST00000441310 TBC1D21Q8IYX1 336 aa16.68■□□□□ 0.26
PMS1-213ENST00000441310 HDAC2Q92769 488 aaKnown RBP16.68■□□□□ 0.26
PMS1-213ENST00000441310 RHOBTB2Q9BYZ6 727 aa16.68■□□□□ 0.26
PMS1-213ENST00000441310 ARHGAP39Q9C0H5 1083 aa16.68■□□□□ 0.26
PMS1-213ENST00000441310 BFARQ9NZS9 450 aa16.68■□□□□ 0.26
PMS1-213ENST00000441310 KIAA1257Q9ULG3 409 aa16.68■□□□□ 0.26
PMS1-213ENST00000441310 ACOT9Q9Y305 439 aa16.68■□□□□ 0.26
PMS1-213ENST00000441310 TARM1B6A8C7 271 aa16.67■□□□□ 0.26
PMS1-213ENST00000441310 HUS1O60921 280 aa16.67■□□□□ 0.26
PMS1-213ENST00000441310 CAPN3P20807 821 aa16.67■□□□□ 0.26
PMS1-213ENST00000441310 SLC6A2P23975 617 aa16.67■□□□□ 0.26
PMS1-213ENST00000441310 PITX1P78337 314 aaPredicted RBP16.67■□□□□ 0.26
PMS1-213ENST00000441310 PAN2Q504Q3 1202 aaKnown RBP16.67■□□□□ 0.26
PMS1-213ENST00000441310 PKDCCQ504Y2 493 aa16.67■□□□□ 0.26
PMS1-213ENST00000441310 ALKAL1Q6UXT8 129 aa16.67■□□□□ 0.26
PMS1-213ENST00000441310 STRADAQ7RTN6 431 aa16.67■□□□□ 0.26
PMS1-213ENST00000441310 CUZD1Q86UP6 607 aa16.67■□□□□ 0.26
PMS1-213ENST00000441310 SYTL1Q8IYJ3 562 aa16.67■□□□□ 0.26
PMS1-213ENST00000441310 PYROXD2Q8N2H3 581 aa16.67■□□□□ 0.26
PMS1-213ENST00000441310 APPL2Q8NEU8 664 aa16.67■□□□□ 0.26
PMS1-213ENST00000441310 BDH2Q9BUT1 245 aa16.67■□□□□ 0.26
PMS1-213ENST00000441310 KCNK1O00180 336 aa16.67■□□□□ 0.26
PMS1-213ENST00000441310 CHRNA1P02708 482 aa16.67■□□□□ 0.26
PMS1-213ENST00000441310 HSD17B1P14061 328 aa16.67■□□□□ 0.26
PMS1-213ENST00000441310 CES1P23141 567 aa16.67■□□□□ 0.26
PMS1-213ENST00000441310 CTGFP29279 349 aa16.67■□□□□ 0.26
PMS1-213ENST00000441310 ACADSBP45954 432 aa16.67■□□□□ 0.26
PMS1-213ENST00000441310 CBX2Q14781 532 aaPredicted RBP16.67■□□□□ 0.26
PMS1-213ENST00000441310 NCBP2-AS2Q69YL0 99 aa16.67■□□□□ 0.26
PMS1-213ENST00000441310 OSTM1Q86WC4 334 aa16.67■□□□□ 0.26
PMS1-213ENST00000441310 FAM131BQ86XD5 332 aa16.67■□□□□ 0.26
PMS1-213ENST00000441310 MCFD2Q8NI22 146 aa16.67■□□□□ 0.26
PMS1-213ENST00000441310 RPL3LQ92901 407 aaKnown RBP16.67■□□□□ 0.26
PMS1-213ENST00000441310 CSPG4P5Q96PW8 444 aa16.67■□□□□ 0.26
PMS1-213ENST00000441310 KCTD14Q9BQ13 255 aaPredicted RBP16.67■□□□□ 0.26
PMS1-213ENST00000441310 MEAF6Q9HAF1 191 aa16.67■□□□□ 0.26
PMS1-213ENST00000441310 ANKRD6Q9Y2G4 727 aa16.67■□□□□ 0.26
PMS1-213ENST00000441310 PDZK1P1A8MUH7 402 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms