RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 TRIB3Q96RU7 358 aa20.49■□□□□ 0.87
CPNE1-219ENST00000440240 SRPK1Q96SB4 655 aaKnown RBP20.49■□□□□ 0.87
CPNE1-219ENST00000440240 XPO4Q9C0E2 1151 aaKnown RBP20.49■□□□□ 0.87
CPNE1-219ENST00000440240 BRD8Q9H0E9 1235 aa20.49■□□□□ 0.87
CPNE1-219ENST00000440240 SLC25A51Q9H1U9 297 aa20.49■□□□□ 0.87
CPNE1-219ENST00000440240 OR2AG1Q9H205 316 aa20.49■□□□□ 0.87
CPNE1-219ENST00000440240 TRIT1Q9H3H1 467 aaKnown RBP20.49■□□□□ 0.87
CPNE1-219ENST00000440240 KLC4Q9NSK0 619 aa20.49■□□□□ 0.87
CPNE1-219ENST00000440240 NFKBIL1Q9UBC1 381 aaPredicted RBP20.49■□□□□ 0.87
CPNE1-219ENST00000440240 IL17BQ9UHF5 180 aa20.49■□□□□ 0.87
CPNE1-219ENST00000440240 SHOC2Q9UQ13 582 aa20.49■□□□□ 0.87
CPNE1-219ENST00000440240 ADGRG1Q9Y653 693 aa20.49■□□□□ 0.87
CPNE1-219ENST00000440240 ZNF891A8MT65 544 aaPredicted RBP20.48■□□□□ 0.87
CPNE1-219ENST00000440240 PPP1R12AO14974 1030 aaPredicted RBP20.48■□□□□ 0.87
CPNE1-219ENST00000440240 AKR1B10O60218 316 aa20.48■□□□□ 0.87
CPNE1-219ENST00000440240 MTA2O94776 668 aa20.48■□□□□ 0.87
CPNE1-219ENST00000440240 XRCC1P18887 633 aaPredicted RBP20.48■□□□□ 0.87
CPNE1-219ENST00000440240 MAPK9P45984 424 aa20.48■□□□□ 0.87
CPNE1-219ENST00000440240 NOP2P46087 812 aaKnown RBP20.48■□□□□ 0.87
CPNE1-219ENST00000440240 CDK18Q07002 472 aa20.48■□□□□ 0.87
CPNE1-219ENST00000440240 CLCA4Q14CN2 919 aa20.48■□□□□ 0.87
CPNE1-219ENST00000440240 ODF2Q5BJF6 829 aa20.48■□□□□ 0.87
CPNE1-219ENST00000440240 TRAM1L1Q8N609 369 aa20.48■□□□□ 0.87
CPNE1-219ENST00000440240 GPR26Q8NDV2 337 aa20.48■□□□□ 0.87
CPNE1-219ENST00000440240 GLYATL1Q969I3 302 aa20.48■□□□□ 0.87
CPNE1-219ENST00000440240 SLC45A3Q96JT2 553 aa20.48■□□□□ 0.87
CPNE1-219ENST00000440240 PLEKHG4BQ96PX9 1271 aa20.48■□□□□ 0.87
CPNE1-219ENST00000440240 DNAJC7Q99615 494 aa20.48■□□□□ 0.87
CPNE1-219ENST00000440240 GPR63Q9BZJ6 419 aa20.48■□□□□ 0.87
CPNE1-219ENST00000440240 UCK1Q9HA47 277 aa20.48■□□□□ 0.87
CPNE1-219ENST00000440240 PRDM8Q9NQV8 689 aa20.48■□□□□ 0.87
CPNE1-219ENST00000440240 LILRA5A6NI73 299 aa20.47■□□□□ 0.87
CPNE1-219ENST00000440240 C3orf70A6NLC5 250 aaPredicted RBP20.47■□□□□ 0.87
CPNE1-219ENST00000440240 CHUKO15111 745 aa20.47■□□□□ 0.87
CPNE1-219ENST00000440240 POLR1CO15160 346 aaPredicted RBP20.47■□□□□ 0.87
CPNE1-219ENST00000440240 CCR10P46092 362 aa20.47■□□□□ 0.87
CPNE1-219ENST00000440240 UBE2IP63279 158 aaKnown RBP20.47■□□□□ 0.87
CPNE1-219ENST00000440240 TRIM14Q14142 442 aa20.47■□□□□ 0.87
CPNE1-219ENST00000440240 SLC14A2Q15849 920 aa20.47■□□□□ 0.87
CPNE1-219ENST00000440240 LRRC38Q5VT99 294 aa20.47■□□□□ 0.87
CPNE1-219ENST00000440240 ALS2CLQ60I27 953 aa20.47■□□□□ 0.87
CPNE1-219ENST00000440240 ADGRG6Q86SQ4 1221 aa20.47■□□□□ 0.87
CPNE1-219ENST00000440240 RHOT2Q8IXI1 618 aa20.47■□□□□ 0.87
CPNE1-219ENST00000440240 CTRCQ99895 268 aa20.47■□□□□ 0.87
CPNE1-219ENST00000440240 TBC1D10AQ9BXI6 508 aa20.47■□□□□ 0.87
CPNE1-219ENST00000440240 CEP41Q9BYV8 373 aa20.47■□□□□ 0.87
CPNE1-219ENST00000440240 OSGEPL1Q9H4B0 414 aa20.47■□□□□ 0.87
CPNE1-219ENST00000440240 GPN2Q9H9Y4 310 aaPredicted RBP20.47■□□□□ 0.87
CPNE1-219ENST00000440240 ARFGAP3Q9NP61 516 aa20.47■□□□□ 0.87
CPNE1-219ENST00000440240 TUBD1Q9UJT1 453 aa20.47■□□□□ 0.87
CPNE1-219ENST00000440240 KMOO15229 486 aa20.46■□□□□ 0.87
CPNE1-219ENST00000440240 VEGFDO43915 354 aa20.46■□□□□ 0.87
CPNE1-219ENST00000440240 VIPP01282 170 aa20.46■□□□□ 0.87
CPNE1-219ENST00000440240 ANKRD34CP0C6C1 535 aa20.46■□□□□ 0.87
CPNE1-219ENST00000440240 PIRTP0C851 137 aa20.46■□□□□ 0.87
CPNE1-219ENST00000440240 NFKB2Q00653 900 aa20.46■□□□□ 0.87
CPNE1-219ENST00000440240 ABHD18Q0P651 414 aa20.46■□□□□ 0.87
CPNE1-219ENST00000440240 PCSK7Q16549 785 aa20.46■□□□□ 0.87
CPNE1-219ENST00000440240 INSCQ1MX18 579 aa20.46■□□□□ 0.87
CPNE1-219ENST00000440240 BZW1Q7L1Q6 419 aaKnown RBP20.46■□□□□ 0.87
CPNE1-219ENST00000440240 TADA1Q96BN2 335 aa20.46■□□□□ 0.87
CPNE1-219ENST00000440240 OLFM3Q96PB7 478 aa20.46■□□□□ 0.87
CPNE1-219ENST00000440240 ANP32EQ9BTT0 268 aa20.46■□□□□ 0.87
CPNE1-219ENST00000440240 KLHL3Q9UH77 587 aa20.46■□□□□ 0.87
CPNE1-219ENST00000440240 ZNF711Q9Y462 761 aa20.46■□□□□ 0.87
CPNE1-219ENST00000440240 TMEM184BQ9Y519 407 aaPredicted RBP20.46■□□□□ 0.87
CPNE1-219ENST00000440240 TERTO14746 1132 aaKnown RBP20.45■□□□□ 0.86
CPNE1-219ENST00000440240 TOX3O15405 576 aaPredicted RBP20.45■□□□□ 0.86
CPNE1-219ENST00000440240 CBFA2T2O43439 604 aa20.45■□□□□ 0.86
CPNE1-219ENST00000440240 STK17BO94768 372 aa20.45■□□□□ 0.86
CPNE1-219ENST00000440240 CDK14O94921 469 aa20.45■□□□□ 0.86
CPNE1-219ENST00000440240 NDST3O95803 873 aa20.45■□□□□ 0.86
CPNE1-219ENST00000440240 ZNF7P17097 686 aaPredicted RBP20.45■□□□□ 0.86
CPNE1-219ENST00000440240 TEX44Q53QW1 395 aa20.45■□□□□ 0.86
CPNE1-219ENST00000440240 ZNF648Q5T619 568 aaPredicted RBP20.45■□□□□ 0.86
CPNE1-219ENST00000440240 LRRTM4Q86VH4 590 aa20.45■□□□□ 0.86
CPNE1-219ENST00000440240 RFX6Q8HWS3 928 aa20.45■□□□□ 0.86
CPNE1-219ENST00000440240 TRIM48Q8IWZ4 208 aa20.45■□□□□ 0.86
CPNE1-219ENST00000440240 CCDC42Q96M95 316 aa20.45■□□□□ 0.86
CPNE1-219ENST00000440240 GLOD4Q9HC38 313 aa20.45■□□□□ 0.86
CPNE1-219ENST00000440240 DDX56Q9NY93 547 aaKnown RBP20.45■□□□□ 0.86
CPNE1-219ENST00000440240 SLC23A2Q9UGH3 650 aa20.45■□□□□ 0.86
CPNE1-219ENST00000440240 MN1Q10571 1320 aaPredicted RBP20.45■□□□□ 0.86
CPNE1-219ENST00000440240 UBXN7O94888 489 aa20.44■□□□□ 0.86
CPNE1-219ENST00000440240 TPM1P09493 284 aa20.44■□□□□ 0.86
CPNE1-219ENST00000440240 BPIP17213 487 aa20.44■□□□□ 0.86
CPNE1-219ENST00000440240 SLC1A1P43005 524 aa20.44■□□□□ 0.86
CPNE1-219ENST00000440240 POLE2P56282 527 aa20.44■□□□□ 0.86
CPNE1-219ENST00000440240 MC1RQ01726 317 aa20.44■□□□□ 0.86
CPNE1-219ENST00000440240 KCNAB2Q13303 367 aa20.44■□□□□ 0.86
CPNE1-219ENST00000440240 CRTC3Q6UUV7 619 aa20.44■□□□□ 0.86
CPNE1-219ENST00000440240 ABRAXAS1Q6UWZ7 409 aa20.44■□□□□ 0.86
CPNE1-219ENST00000440240 NPNTQ6UXI9 565 aa20.44■□□□□ 0.86
CPNE1-219ENST00000440240 TMEM26Q6ZUK4 368 aa20.44■□□□□ 0.86
CPNE1-219ENST00000440240 RHOT1Q8IXI2 618 aa20.44■□□□□ 0.86
CPNE1-219ENST00000440240 RNF25Q96BH1 459 aaPredicted RBP20.44■□□□□ 0.86
CPNE1-219ENST00000440240 C9orf72Q96LT7 481 aa20.44■□□□□ 0.86
CPNE1-219ENST00000440240 TIMM29Q9BSF4 260 aa20.44■□□□□ 0.86
CPNE1-219ENST00000440240 TRIM4Q9C037 500 aa20.44■□□□□ 0.86
CPNE1-219ENST00000440240 APMAPQ9HDC9 416 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms