RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 FDFT1P37268 417 aa17.51■□□□□ 0.39
CCDC188-201ENST00000439765 SPAM1P38567 509 aa17.51■□□□□ 0.39
CCDC188-201ENST00000439765 DRG2P55039 364 aaKnown RBP17.51■□□□□ 0.39
CCDC188-201ENST00000439765 TAF1AQ15573 450 aaPredicted RBP17.51■□□□□ 0.39
CCDC188-201ENST00000439765 ZNF648Q5T619 568 aaPredicted RBP17.51■□□□□ 0.39
CCDC188-201ENST00000439765 TAF8Q7Z7C8 310 aa17.51■□□□□ 0.39
CCDC188-201ENST00000439765 GKN2Q86XP6 184 aa17.51■□□□□ 0.39
CCDC188-201ENST00000439765 TRIM31Q9BZY9 425 aa17.51■□□□□ 0.39
CCDC188-201ENST00000439765 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.51■□□□□ 0.39
CCDC188-201ENST00000439765 RALYQ9UKM9 306 aaKnown RBP17.51■□□□□ 0.39
CCDC188-201ENST00000439765 SNX24Q9Y343 169 aa17.51■□□□□ 0.39
CCDC188-201ENST00000439765 GPSM3Q9Y4H4 160 aa17.51■□□□□ 0.39
CCDC188-201ENST00000439765 KCTD3Q9Y597 815 aa17.51■□□□□ 0.39
CCDC188-201ENST00000439765 NBEAQ8NFP9 2946 aa17.51■□□□□ 0.39
CCDC188-201ENST00000439765 LY6G6EA0A0G2JKS1 128 aa17.5■□□□□ 0.39
CCDC188-201ENST00000439765 C2orf81A6NN90 581 aa17.5■□□□□ 0.39
CCDC188-201ENST00000439765 TPP1O14773 563 aa17.5■□□□□ 0.39
CCDC188-201ENST00000439765 SLC25A14O95258 325 aaPredicted RBP17.5■□□□□ 0.39
CCDC188-201ENST00000439765 IVLP07476 585 aa17.5■□□□□ 0.39
CCDC188-201ENST00000439765 APRTP07741 180 aa17.5■□□□□ 0.39
CCDC188-201ENST00000439765 TPH1P17752 444 aa17.5■□□□□ 0.39
CCDC188-201ENST00000439765 BASP1P80723 227 aaKnown RBP17.5■□□□□ 0.39
CCDC188-201ENST00000439765 GUCY2DQ02846 1103 aa17.5■□□□□ 0.39
CCDC188-201ENST00000439765 SEPT6Q14141 434 aa17.5■□□□□ 0.39
CCDC188-201ENST00000439765 POU6F1Q14863 301 aa17.5■□□□□ 0.39
CCDC188-201ENST00000439765 KIF26BQ2KJY2 2108 aa17.5■□□□□ 0.39
CCDC188-201ENST00000439765 ATP13A5Q4VNC0 1218 aa17.5■□□□□ 0.39
CCDC188-201ENST00000439765 C6orf132Q5T0Z8 1188 aa17.5■□□□□ 0.39
CCDC188-201ENST00000439765 PHYKPLQ8IUZ5 450 aa17.5■□□□□ 0.39
CCDC188-201ENST00000439765 CACTIN-AS1Q8N1I8 211 aa17.5■□□□□ 0.39
CCDC188-201ENST00000439765 OR4K2Q8NGD2 314 aa17.5■□□□□ 0.39
CCDC188-201ENST00000439765 SEC14L1Q92503 715 aa17.5■□□□□ 0.39
CCDC188-201ENST00000439765 GLYATL1Q969I3 302 aa17.5■□□□□ 0.39
CCDC188-201ENST00000439765 OR2M4Q96R27 311 aa17.5■□□□□ 0.39
CCDC188-201ENST00000439765 ARNT2Q9HBZ2 717 aa17.5■□□□□ 0.39
CCDC188-201ENST00000439765 EPB41L5Q9HCM4 733 aa17.5■□□□□ 0.39
CCDC188-201ENST00000439765 IL26Q9NPH9 171 aa17.5■□□□□ 0.39
CCDC188-201ENST00000439765 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.5■□□□□ 0.39
CCDC188-201ENST00000439765 PRKAB1Q9Y478 270 aa17.5■□□□□ 0.39
CCDC188-201ENST00000439765 PCYT1BQ9Y5K3 369 aaPredicted RBP17.5■□□□□ 0.39
CCDC188-201ENST00000439765 U3KQA8 63 aa17.5■□□□□ 0.39
CCDC188-201ENST00000439765 V9GYY5 206 aaPredicted RBP17.5■□□□□ 0.39
CCDC188-201ENST00000439765 GLYATL1P3A0A0U1RQE8 302 aa17.5■□□□□ 0.39
CCDC188-201ENST00000439765 ERI2A8K979 691 aaKnown RBP17.5■□□□□ 0.39
CCDC188-201ENST00000439765 DNALI1O14645 258 aaPredicted RBP17.5■□□□□ 0.39
CCDC188-201ENST00000439765 PSMD3O43242 534 aa17.5■□□□□ 0.39
CCDC188-201ENST00000439765 MTX2O75431 263 aa17.5■□□□□ 0.39
CCDC188-201ENST00000439765 CRTAMO95727 393 aa17.5■□□□□ 0.39
CCDC188-201ENST00000439765 JUPP14923 745 aa17.5■□□□□ 0.39
CCDC188-201ENST00000439765 LPOP22079 712 aaPredicted RBP17.5■□□□□ 0.39
CCDC188-201ENST00000439765 AK4P27144 223 aaPredicted RBP17.5■□□□□ 0.39
CCDC188-201ENST00000439765 RPL21P46778 160 aaKnown RBP17.5■□□□□ 0.39
CCDC188-201ENST00000439765 TMPRSS15P98073 1019 aa17.5■□□□□ 0.39
CCDC188-201ENST00000439765 CYP4F3Q08477 520 aa17.5■□□□□ 0.39
CCDC188-201ENST00000439765 MSLNQ13421 630 aaPredicted RBP17.5■□□□□ 0.39
CCDC188-201ENST00000439765 SEMA5AQ13591 1074 aa17.5■□□□□ 0.39
CCDC188-201ENST00000439765 ERCC6LQ2NKX8 1250 aa17.5■□□□□ 0.39
CCDC188-201ENST00000439765 HES3Q5TGS1 186 aa17.5■□□□□ 0.39
CCDC188-201ENST00000439765 PDPK2PQ6A1A2 396 aa17.5■□□□□ 0.39
CCDC188-201ENST00000439765 SLC30A9Q6PML9 568 aa17.5■□□□□ 0.39
CCDC188-201ENST00000439765 GALNT13Q8IUC8 556 aa17.5■□□□□ 0.39
CCDC188-201ENST00000439765 SLC35F3Q8IY50 421 aa17.5■□□□□ 0.39
CCDC188-201ENST00000439765 FAM181AQ8N9Y4 354 aa17.5■□□□□ 0.39
CCDC188-201ENST00000439765 KYQ8NBH2 561 aa17.5■□□□□ 0.39
CCDC188-201ENST00000439765 OR52K1Q8NGK4 314 aa17.5■□□□□ 0.39
CCDC188-201ENST00000439765 OR13C4Q8NGS5 318 aa17.5■□□□□ 0.39
CCDC188-201ENST00000439765 BRSK1Q8TDC3 778 aa17.5■□□□□ 0.39
CCDC188-201ENST00000439765 SCG3Q8WXD2 468 aaKnown RBP17.5■□□□□ 0.39
CCDC188-201ENST00000439765 SNF8Q96H20 258 aa17.5■□□□□ 0.39
CCDC188-201ENST00000439765 BOCQ9BWV1 1114 aa17.5■□□□□ 0.39
CCDC188-201ENST00000439765 DPH5Q9H2P9 285 aa17.5■□□□□ 0.39
CCDC188-201ENST00000439765 VPS18Q9P253 973 aa17.5■□□□□ 0.39
CCDC188-201ENST00000439765 LHX6Q9UPM6 363 aa17.5■□□□□ 0.39
CCDC188-201ENST00000439765 CCDC78A2IDD5 438 aa17.49■□□□□ 0.39
CCDC188-201ENST00000439765 B4DGG1 531 aa17.49■□□□□ 0.39
CCDC188-201ENST00000439765 CCL22O00626 93 aa17.49■□□□□ 0.39
CCDC188-201ENST00000439765 SEC31AO94979 1220 aaKnown RBP17.49■□□□□ 0.39
CCDC188-201ENST00000439765 PRAMEF1O95521 474 aa17.49■□□□□ 0.39
CCDC188-201ENST00000439765 CKMT1AP12532 417 aa17.49■□□□□ 0.39
CCDC188-201ENST00000439765 ZNF140P52738 457 aaPredicted RBP17.49■□□□□ 0.39
CCDC188-201ENST00000439765 TERF1P54274 439 aa17.49■□□□□ 0.39
CCDC188-201ENST00000439765 ILF3Q12906 894 aaKnown RBP eCLIP17.49■□□□□ 0.39
CCDC188-201ENST00000439765 TRADDQ15628 312 aa17.49■□□□□ 0.39
CCDC188-201ENST00000439765 CHRNA6Q15825 494 aa17.49■□□□□ 0.39
CCDC188-201ENST00000439765 ZDHHC20Q5W0Z9 365 aa17.49■□□□□ 0.39
CCDC188-201ENST00000439765 IGSF10Q6WRI0 2623 aa17.49■□□□□ 0.39
CCDC188-201ENST00000439765 PPP1R21Q6ZMI0 780 aa17.49■□□□□ 0.39
CCDC188-201ENST00000439765 PCGF5Q86SE9 256 aa17.49■□□□□ 0.39
CCDC188-201ENST00000439765 LINC00523Q86TU6 105 aa17.49■□□□□ 0.39
CCDC188-201ENST00000439765 DNAAF3Q8N9W5 541 aa17.49■□□□□ 0.39
CCDC188-201ENST00000439765 NXPE2Q96DL1 559 aa17.49■□□□□ 0.39
CCDC188-201ENST00000439765 SCARF2Q96GP6 870 aaPredicted RBP17.49■□□□□ 0.39
CCDC188-201ENST00000439765 OR2AG1Q9H205 316 aa17.49■□□□□ 0.39
CCDC188-201ENST00000439765 ANKZF1Q9H8Y5 726 aa17.49■□□□□ 0.39
CCDC188-201ENST00000439765 WHRNQ9P202 907 aa17.49■□□□□ 0.39
CCDC188-201ENST00000439765 ATXN10Q9UBB4 475 aa17.49■□□□□ 0.39
CCDC188-201ENST00000439765 FKBPLQ9UIM3 349 aa17.49■□□□□ 0.39
CCDC188-201ENST00000439765 TMPRSS11EQ9UL52 423 aa17.49■□□□□ 0.39
CCDC188-201ENST00000439765 GPR34Q9UPC5 381 aa17.49■□□□□ 0.39
CCDC188-201ENST00000439765 PLEKHM1Q9Y4G2 1056 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms