RNA–Protein interactions for RNA: ENST00000439669.5

CPNE1-217, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 784 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-217ENST00000439669 ITGA9Q13797 1035 aa23.72■■□□□ 1.39
CPNE1-217ENST00000439669 OASLQ15646 514 aaKnown RBP23.72■■□□□ 1.39
CPNE1-217ENST00000439669 AMZ1Q400G9 498 aa23.72■■□□□ 1.39
CPNE1-217ENST00000439669 MAP9Q49MG5 647 aa23.72■■□□□ 1.39
CPNE1-217ENST00000439669 KCTD11Q693B1 232 aa23.72■■□□□ 1.39
CPNE1-217ENST00000439669 ZNF438Q7Z4V0 828 aa23.72■■□□□ 1.39
CPNE1-217ENST00000439669 B3GNT8Q7Z7M8 397 aa23.72■■□□□ 1.39
CPNE1-217ENST00000439669 DTX3LQ8TDB6 740 aa23.72■■□□□ 1.39
CPNE1-217ENST00000439669 BRSK1Q8TDC3 778 aa23.72■■□□□ 1.39
CPNE1-217ENST00000439669 SLC37A2Q8TED4 501 aa23.72■■□□□ 1.39
CPNE1-217ENST00000439669 TTC25Q96NG3 672 aa23.72■■□□□ 1.39
CPNE1-217ENST00000439669 FOXP3Q9BZS1 431 aa23.72■■□□□ 1.39
CPNE1-217ENST00000439669 ZCCHC2Q9C0B9 1178 aaKnown RBP23.72■■□□□ 1.39
CPNE1-217ENST00000439669 UGT1A7Q9HAW7 530 aa23.72■■□□□ 1.39
CPNE1-217ENST00000439669 UGT1A10Q9HAW8 530 aa23.72■■□□□ 1.39
CPNE1-217ENST00000439669 UGT1A8Q9HAW9 530 aa23.72■■□□□ 1.39
CPNE1-217ENST00000439669 EPB41L5Q9HCM4 733 aa23.72■■□□□ 1.39
CPNE1-217ENST00000439669 KLC4Q9NSK0 619 aa23.72■■□□□ 1.39
CPNE1-217ENST00000439669 TBC1D29Q9UFV1 150 aa23.72■■□□□ 1.39
CPNE1-217ENST00000439669 KCTD3Q9Y597 815 aa23.72■■□□□ 1.39
CPNE1-217ENST00000439669 APC2O95996 2303 aa23.72■■□□□ 1.39
CPNE1-217ENST00000439669 CHUKO15111 745 aa23.71■■□□□ 1.39
CPNE1-217ENST00000439669 KMOO15229 486 aa23.71■■□□□ 1.39
CPNE1-217ENST00000439669 PRAMEF1O95521 474 aa23.71■■□□□ 1.39
CPNE1-217ENST00000439669 ACTN2P35609 894 aa23.71■■□□□ 1.39
CPNE1-217ENST00000439669 LSSP48449 732 aa23.71■■□□□ 1.39
CPNE1-217ENST00000439669 INHBCP55103 352 aa23.71■■□□□ 1.39
CPNE1-217ENST00000439669 OR1D5P58170 312 aa23.71■■□□□ 1.39
CPNE1-217ENST00000439669 B4GALNT1Q00973 533 aa23.71■■□□□ 1.39
CPNE1-217ENST00000439669 DENND5AQ6IQ26 1287 aa23.71■■□□□ 1.39
CPNE1-217ENST00000439669 FOXR1Q6PIV2 292 aa23.71■■□□□ 1.39
CPNE1-217ENST00000439669 TRAPPC5Q8IUR0 188 aa23.71■■□□□ 1.39
CPNE1-217ENST00000439669 RTP4Q96DX8 246 aa23.71■■□□□ 1.39
CPNE1-217ENST00000439669 TMEM74Q96NL1 305 aa23.71■■□□□ 1.39
CPNE1-217ENST00000439669 DCBLD2Q96PD2 775 aa23.71■■□□□ 1.39
CPNE1-217ENST00000439669 TLR10Q9BXR5 811 aa23.71■■□□□ 1.39
CPNE1-217ENST00000439669 ARNT2Q9HBZ2 717 aa23.71■■□□□ 1.39
CPNE1-217ENST00000439669 FKBPLQ9UIM3 349 aa23.71■■□□□ 1.39
CPNE1-217ENST00000439669 DNAJC16Q9Y2G8 782 aa23.71■■□□□ 1.39
CPNE1-217ENST00000439669 ACACAQ13085 2346 aa23.71■■□□□ 1.39
CPNE1-217ENST00000439669 GAPDHSO14556 408 aaPredicted RBP23.7■■□□□ 1.38
CPNE1-217ENST00000439669 PPM1DO15297 605 aa23.7■■□□□ 1.38
CPNE1-217ENST00000439669 PSMD3O43242 534 aa23.7■■□□□ 1.38
CPNE1-217ENST00000439669 B4GAT1O43505 415 aa23.7■■□□□ 1.38
CPNE1-217ENST00000439669 SLC2A4P14672 509 aa23.7■■□□□ 1.38
CPNE1-217ENST00000439669 TMPRSS15P98073 1019 aa23.7■■□□□ 1.38
CPNE1-217ENST00000439669 PDE1BQ01064 536 aa23.7■■□□□ 1.38
CPNE1-217ENST00000439669 TMEM115Q12893 351 aaPredicted RBP23.7■■□□□ 1.38
CPNE1-217ENST00000439669 NR1D2Q14995 579 aa23.7■■□□□ 1.38
CPNE1-217ENST00000439669 LDLRAP1Q5SW96 308 aa23.7■■□□□ 1.38
CPNE1-217ENST00000439669 GPRC6AQ5T6X5 926 aa23.7■■□□□ 1.38
CPNE1-217ENST00000439669 LSMEM2Q8N112 164 aa23.7■■□□□ 1.38
CPNE1-217ENST00000439669 SFRP1Q8N474 314 aa23.7■■□□□ 1.38
CPNE1-217ENST00000439669 STRADBQ9C0K7 418 aa23.7■■□□□ 1.38
CPNE1-217ENST00000439669 STN1Q9H668 368 aaKnown RBP23.7■■□□□ 1.38
CPNE1-217ENST00000439669 CCDC187A0A096LP49 1063 aa23.69■■□□□ 1.38
CPNE1-217ENST00000439669 TMX2-CTNND1H3BSU7 103 aa23.69■■□□□ 1.38
CPNE1-217ENST00000439669 CEP104O60308 925 aa23.69■■□□□ 1.38
CPNE1-217ENST00000439669 AP2A1O95782 977 aa23.69■■□□□ 1.38
CPNE1-217ENST00000439669 FGGP02679 453 aa23.69■■□□□ 1.38
CPNE1-217ENST00000439669 F3P13726 295 aa23.69■■□□□ 1.38
CPNE1-217ENST00000439669 ZNF7P17097 686 aaPredicted RBP23.69■■□□□ 1.38
CPNE1-217ENST00000439669 GPR3P46089 330 aa23.69■■□□□ 1.38
CPNE1-217ENST00000439669 PPM1FP49593 454 aaPredicted RBP23.69■■□□□ 1.38
CPNE1-217ENST00000439669 MSLNQ13421 630 aaPredicted RBP23.69■■□□□ 1.38
CPNE1-217ENST00000439669 SEPT6Q14141 434 aa23.69■■□□□ 1.38
CPNE1-217ENST00000439669 TBC1D25Q3MII6 688 aa23.69■■□□□ 1.38
CPNE1-217ENST00000439669 ZNF761Q86XN6 746 aaPredicted RBP23.69■■□□□ 1.38
CPNE1-217ENST00000439669 CCDC89Q8N998 374 aa23.69■■□□□ 1.38
CPNE1-217ENST00000439669 DDHD1Q8NEL9 900 aa23.69■■□□□ 1.38
CPNE1-217ENST00000439669 OR13C4Q8NGS5 318 aa23.69■■□□□ 1.38
CPNE1-217ENST00000439669 WDR36Q8NI36 951 aaKnown RBP23.69■■□□□ 1.38
CPNE1-217ENST00000439669 ZNF398Q8TD17 642 aa23.69■■□□□ 1.38
CPNE1-217ENST00000439669 TIMM29Q9BSF4 260 aa23.69■■□□□ 1.38
CPNE1-217ENST00000439669 RDH14Q9HBH5 336 aa23.69■■□□□ 1.38
CPNE1-217ENST00000439669 SMOXQ9NWM0 555 aa23.69■■□□□ 1.38
CPNE1-217ENST00000439669 PIH1D1Q9NWS0 290 aaKnown RBP23.69■■□□□ 1.38
CPNE1-217ENST00000439669 KCNK4Q9NYG8 393 aa23.69■■□□□ 1.38
CPNE1-217ENST00000439669 SLC23A2Q9UGH3 650 aa23.69■■□□□ 1.38
CPNE1-217ENST00000439669 A0A1W2PNU3 283 aaPredicted RBP23.68■■□□□ 1.38
CPNE1-217ENST00000439669 TLX3O43711 291 aaPredicted RBP23.68■■□□□ 1.38
CPNE1-217ENST00000439669 SRP72O76094 671 aaKnown RBP23.68■■□□□ 1.38
CPNE1-217ENST00000439669 TPH1P17752 444 aa23.68■■□□□ 1.38
CPNE1-217ENST00000439669 RBMS1P29558 406 aaKnown RBP23.68■■□□□ 1.38
CPNE1-217ENST00000439669 AKT1P31749 480 aa23.68■■□□□ 1.38
CPNE1-217ENST00000439669 CXCR5P32302 372 aa23.68■■□□□ 1.38
CPNE1-217ENST00000439669 CA5AP35218 305 aa23.68■■□□□ 1.38
CPNE1-217ENST00000439669 FASLGP48023 281 aa23.68■■□□□ 1.38
CPNE1-217ENST00000439669 LMAN1P49257 510 aa23.68■■□□□ 1.38
CPNE1-217ENST00000439669 CLCNKAP51800 687 aa23.68■■□□□ 1.38
CPNE1-217ENST00000439669 ZNF140P52738 457 aaPredicted RBP23.68■■□□□ 1.38
CPNE1-217ENST00000439669 HHEXQ03014 270 aa23.68■■□□□ 1.38
CPNE1-217ENST00000439669 IYDQ6PHW0 289 aa23.68■■□□□ 1.38
CPNE1-217ENST00000439669 USP53Q70EK8 1073 aa23.68■■□□□ 1.38
CPNE1-217ENST00000439669 ZNF547Q8IVP9 402 aa23.68■■□□□ 1.38
CPNE1-217ENST00000439669 MAIP1Q8WWC4 291 aa23.68■■□□□ 1.38
CPNE1-217ENST00000439669 ANP32BQ92688 251 aaKnown RBP23.68■■□□□ 1.38
CPNE1-217ENST00000439669 LIN37Q96GY3 246 aaPredicted RBP23.68■■□□□ 1.38
CPNE1-217ENST00000439669 SLC38A3Q99624 504 aa23.68■■□□□ 1.38
CPNE1-217ENST00000439669 ZMYND15Q9H091 742 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms