RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 SCAIQ8N9R8 606 aa13.46□□□□□ -0.25
PCNX3-202ENST00000439247 TTC16Q8NEE8 873 aa13.46□□□□□ -0.25
PCNX3-202ENST00000439247 ITPKCQ96DU7 683 aa13.46□□□□□ -0.25
PCNX3-202ENST00000439247 CCDC126Q96EE4 140 aa13.46□□□□□ -0.25
PCNX3-202ENST00000439247 HBEGFQ99075 208 aa13.46□□□□□ -0.25
PCNX3-202ENST00000439247 BAG5Q9UL15 447 aa13.46□□□□□ -0.25
PCNX3-202ENST00000439247 JUNBP17275 347 aaPredicted RBP13.46□□□□□ -0.25
PCNX3-202ENST00000439247 ZFP36L2P47974 494 aaKnown RBP13.46□□□□□ -0.25
PCNX3-202ENST00000439247 GP2P55259 537 aaKnown RBP13.46□□□□□ -0.25
PCNX3-202ENST00000439247 TPD52P55327 224 aaPredicted RBP13.46□□□□□ -0.25
PCNX3-202ENST00000439247 HERVK_113P63132 956 aa13.46□□□□□ -0.25
PCNX3-202ENST00000439247 CTF1Q16619 201 aa13.46□□□□□ -0.25
PCNX3-202ENST00000439247 LAIR2Q6ISS4 152 aa13.46□□□□□ -0.25
PCNX3-202ENST00000439247 CATSPER4Q7RTX7 472 aa13.46□□□□□ -0.25
PCNX3-202ENST00000439247 LRRC52Q8N7C0 313 aa13.46□□□□□ -0.25
PCNX3-202ENST00000439247 LINC01465Q8N7H1 131 aa13.46□□□□□ -0.25
PCNX3-202ENST00000439247 PPTC7Q8NI37 304 aa13.46□□□□□ -0.25
PCNX3-202ENST00000439247 CCDC138Q96M89 665 aa13.46□□□□□ -0.25
PCNX3-202ENST00000439247 PPM1MQ96MI6 270 aa13.46□□□□□ -0.25
PCNX3-202ENST00000439247 ACOX2Q99424 681 aa13.46□□□□□ -0.25
PCNX3-202ENST00000439247 C16orf70Q9BSU1 422 aa13.46□□□□□ -0.25
PCNX3-202ENST00000439247 ERVK-6Q9BXR3 956 aa13.46□□□□□ -0.25
PCNX3-202ENST00000439247 AMBRA1Q9C0C7 1298 aa13.46□□□□□ -0.25
PCNX3-202ENST00000439247 SDR39U1Q9NRG7 319 aaPredicted RBP13.46□□□□□ -0.25
PCNX3-202ENST00000439247 RBM22Q9NW64 420 aaKnown RBP eCLIP13.46□□□□□ -0.25
PCNX3-202ENST00000439247 B3GNT3Q9Y2A9 372 aa13.46□□□□□ -0.25
PCNX3-202ENST00000439247 AAR2Q9Y312 384 aaKnown RBP13.46□□□□□ -0.25
PCNX3-202ENST00000439247 NCF1BA6NI72 391 aaPredicted RBP13.46□□□□□ -0.26
PCNX3-202ENST00000439247 NCF1CA8MVU1 366 aaPredicted RBP13.46□□□□□ -0.26
PCNX3-202ENST00000439247 PIRO00625 290 aa13.46□□□□□ -0.26
PCNX3-202ENST00000439247 MTSS1O43312 755 aa13.46□□□□□ -0.26
PCNX3-202ENST00000439247 XPNPEP2O43895 674 aa13.46□□□□□ -0.26
PCNX3-202ENST00000439247 IGHA2P01877 340 aa13.46□□□□□ -0.26
PCNX3-202ENST00000439247 ALPLP05186 524 aa13.46□□□□□ -0.26
PCNX3-202ENST00000439247 THRBP10828 461 aa13.46□□□□□ -0.26
PCNX3-202ENST00000439247 NCF1P14598 390 aaPredicted RBP13.46□□□□□ -0.26
PCNX3-202ENST00000439247 ELNP15502 786 aa13.46□□□□□ -0.26
PCNX3-202ENST00000439247 MAGP20916 626 aa13.46□□□□□ -0.26
PCNX3-202ENST00000439247 TCEA1P23193 301 aaKnown RBP13.46□□□□□ -0.26
PCNX3-202ENST00000439247 IL12AP29459 219 aa13.46□□□□□ -0.26
PCNX3-202ENST00000439247 ADRA1AP35348 466 aa13.46□□□□□ -0.26
PCNX3-202ENST00000439247 ATP4BP51164 291 aa13.46□□□□□ -0.26
PCNX3-202ENST00000439247 FCGRTP55899 365 aa13.46□□□□□ -0.26
PCNX3-202ENST00000439247 DAOAP59103 153 aa13.46□□□□□ -0.26
PCNX3-202ENST00000439247 BEX3Q00994 111 aa13.46□□□□□ -0.26
PCNX3-202ENST00000439247 PHKG1Q16816 387 aa13.46□□□□□ -0.26
PCNX3-202ENST00000439247 GLYATQ6IB77 296 aa13.46□□□□□ -0.26
PCNX3-202ENST00000439247 SOCS4Q8WXH5 440 aa13.46□□□□□ -0.26
PCNX3-202ENST00000439247 SLC39A8Q9C0K1 460 aa13.46□□□□□ -0.26
PCNX3-202ENST00000439247 AKIP1Q9NQ31 210 aa13.46□□□□□ -0.26
PCNX3-202ENST00000439247 PRDM8Q9NQV8 689 aa13.46□□□□□ -0.26
PCNX3-202ENST00000439247 SEPT3Q9UH03 358 aa13.46□□□□□ -0.26
PCNX3-202ENST00000439247 SMIM28A0A1B0GU29 152 aa13.45□□□□□ -0.26
PCNX3-202ENST00000439247 ALDH1A1P00352 501 aa13.45□□□□□ -0.26
PCNX3-202ENST00000439247 MMP3P08254 477 aa13.45□□□□□ -0.26
PCNX3-202ENST00000439247 PRSS56P0CW18 603 aa13.45□□□□□ -0.26
PCNX3-202ENST00000439247 FCGR1AP12314 374 aa13.45□□□□□ -0.26
PCNX3-202ENST00000439247 BMP4P12644 408 aa13.45□□□□□ -0.26
PCNX3-202ENST00000439247 VBP1P61758 197 aa13.45□□□□□ -0.26
PCNX3-202ENST00000439247 OCA2Q04671 838 aa13.45□□□□□ -0.26
PCNX3-202ENST00000439247 SLC13A2Q13183 592 aa13.45□□□□□ -0.26
PCNX3-202ENST00000439247 SELENBP1Q13228 472 aa13.45□□□□□ -0.26
PCNX3-202ENST00000439247 ZNF846Q147U1 533 aa13.45□□□□□ -0.26
PCNX3-202ENST00000439247 INAQ16352 499 aa13.45□□□□□ -0.26
PCNX3-202ENST00000439247 PRMT9Q6P2P2 845 aa13.45□□□□□ -0.26
PCNX3-202ENST00000439247 THAP5Q7Z6K1 395 aa13.45□□□□□ -0.26
PCNX3-202ENST00000439247 SLC22A9Q8IVM8 553 aa13.45□□□□□ -0.26
PCNX3-202ENST00000439247 ARHGAP12Q8IWW6 846 aa13.45□□□□□ -0.26
PCNX3-202ENST00000439247 ATPAF2Q8N5M1 289 aa13.45□□□□□ -0.26
PCNX3-202ENST00000439247 CHDHQ8NE62 594 aaPredicted RBP13.45□□□□□ -0.26
PCNX3-202ENST00000439247 CD99L2Q8TCZ2 262 aa13.45□□□□□ -0.26
PCNX3-202ENST00000439247 NRBF2Q96F24 287 aa13.45□□□□□ -0.26
PCNX3-202ENST00000439247 VAT1Q99536 393 aa13.45□□□□□ -0.26
PCNX3-202ENST00000439247 OSMRQ99650 979 aa13.45□□□□□ -0.26
PCNX3-202ENST00000439247 MIR1-1HGQ9H1L0 117 aa13.45□□□□□ -0.26
PCNX3-202ENST00000439247 ZNF639Q9UID6 485 aa13.45□□□□□ -0.26
PCNX3-202ENST00000439247 GPR45Q9Y5Y3 372 aa13.45□□□□□ -0.26
PCNX3-202ENST00000439247 PMF1-BGLAPU3KQ54 211 aa13.45□□□□□ -0.26
PCNX3-202ENST00000439247 GJB3O75712 270 aa13.45□□□□□ -0.26
PCNX3-202ENST00000439247 LBPP18428 481 aa13.45□□□□□ -0.26
PCNX3-202ENST00000439247 SP3Q02447 781 aa13.45□□□□□ -0.26
PCNX3-202ENST00000439247 IHHQ14623 411 aa13.45□□□□□ -0.26
PCNX3-202ENST00000439247 NANOGNBQ7Z5D8 188 aa13.45□□□□□ -0.26
PCNX3-202ENST00000439247 DTWD1Q8N5C7 304 aa13.45□□□□□ -0.26
PCNX3-202ENST00000439247 OR13J1Q8NGT2 312 aa13.45□□□□□ -0.26
PCNX3-202ENST00000439247 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.45□□□□□ -0.26
PCNX3-202ENST00000439247 SMOQ99835 787 aa13.45□□□□□ -0.26
PCNX3-202ENST00000439247 BDH2Q9BUT1 245 aa13.45□□□□□ -0.26
PCNX3-202ENST00000439247 SCUBE2Q9NQ36 999 aa13.45□□□□□ -0.26
PCNX3-202ENST00000439247 NUDT5Q9UKK9 219 aa13.45□□□□□ -0.26
PCNX3-202ENST00000439247 TGM1P22735 817 aa13.44□□□□□ -0.26
PCNX3-202ENST00000439247 DNAJB1P25685 340 aa13.44□□□□□ -0.26
PCNX3-202ENST00000439247 GSTM2P28161 218 aa13.44□□□□□ -0.26
PCNX3-202ENST00000439247 MTHFRP42898 656 aa13.44□□□□□ -0.26
PCNX3-202ENST00000439247 ALDH3A2P51648 485 aa13.44□□□□□ -0.26
PCNX3-202ENST00000439247 CD47Q08722 323 aa13.44□□□□□ -0.26
PCNX3-202ENST00000439247 DAG1Q14118 895 aa13.44□□□□□ -0.26
PCNX3-202ENST00000439247 CATSPEREQ5SY80 951 aa13.44□□□□□ -0.26
PCNX3-202ENST00000439247 SMYD5Q6GMV2 418 aa13.44□□□□□ -0.26
PCNX3-202ENST00000439247 KIAA0930Q6ICG6 404 aaPredicted RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms