RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 GAGE12FP0CL80 117 aa3.34□□□□□ -1.87
HMGB3P12-201ENST00000438745 GAGE12GP0CL81 117 aa3.34□□□□□ -1.87
HMGB3P12-201ENST00000438745 GAGE12IP0CL82 117 aa3.34□□□□□ -1.87
HMGB3P12-201ENST00000438745 RARGP13631 454 aa3.34□□□□□ -1.87
HMGB3P12-201ENST00000438745 SHMT1P34896 483 aa3.34□□□□□ -1.87
HMGB3P12-201ENST00000438745 BSGP35613 385 aa3.34□□□□□ -1.87
HMGB3P12-201ENST00000438745 PIP4K2AP48426 406 aaPredicted RBP3.34□□□□□ -1.87
HMGB3P12-201ENST00000438745 DLX5P56178 289 aa3.34□□□□□ -1.87
HMGB3P12-201ENST00000438745 ARF3P61204 181 aaPredicted RBP3.34□□□□□ -1.87
HMGB3P12-201ENST00000438745 ARF1P84077 181 aaKnown RBP3.34□□□□□ -1.87
HMGB3P12-201ENST00000438745 DLG1Q12959 904 aa3.34□□□□□ -1.87
HMGB3P12-201ENST00000438745 GAGE1Q13065 139 aa3.34□□□□□ -1.87
HMGB3P12-201ENST00000438745 GAGE4Q13068 117 aa3.34□□□□□ -1.87
HMGB3P12-201ENST00000438745 ZRSR1Q15695 479 aaKnown RBP3.34□□□□□ -1.87
HMGB3P12-201ENST00000438745 CCNG2Q16589 344 aa3.34□□□□□ -1.87
HMGB3P12-201ENST00000438745 DPCR1Q3MIW9 517 aa3.34□□□□□ -1.87
HMGB3P12-201ENST00000438745 ZNF672Q499Z4 452 aaPredicted RBP3.34□□□□□ -1.87
HMGB3P12-201ENST00000438745 SETMARQ53H47 684 aaPredicted RBP3.34□□□□□ -1.87
HMGB3P12-201ENST00000438745 ZNF628Q5EBL2 1059 aa3.34□□□□□ -1.87
HMGB3P12-201ENST00000438745 HYIQ5T013 277 aa3.34□□□□□ -1.87
HMGB3P12-201ENST00000438745 LCE1EQ5T753 118 aa3.34□□□□□ -1.87
HMGB3P12-201ENST00000438745 CST9Q5W186 159 aa3.34□□□□□ -1.87
HMGB3P12-201ENST00000438745 ITPRIPL1Q6GPH6 555 aa3.34□□□□□ -1.87
HMGB3P12-201ENST00000438745 TTI2Q6NXR4 508 aa3.34□□□□□ -1.87
HMGB3P12-201ENST00000438745 KLHL24Q6TFL4 600 aa3.34□□□□□ -1.87
HMGB3P12-201ENST00000438745 CYP20A1Q6UW02 462 aa3.34□□□□□ -1.87
HMGB3P12-201ENST00000438745 NEK10Q6ZWH5 1172 aa3.34□□□□□ -1.87
HMGB3P12-201ENST00000438745 IKBIPQ70UQ0 350 aa3.34□□□□□ -1.87
HMGB3P12-201ENST00000438745 GSTA5Q7RTV2 222 aa3.34□□□□□ -1.87
HMGB3P12-201ENST00000438745 NR2C2APQ86WQ0 139 aa3.34□□□□□ -1.87
HMGB3P12-201ENST00000438745 SFTPA2Q8IWL1 248 aa3.34□□□□□ -1.87
HMGB3P12-201ENST00000438745 SLC35F3Q8IY50 421 aa3.34□□□□□ -1.87
HMGB3P12-201ENST00000438745 CCDC105Q8IYK2 499 aa3.34□□□□□ -1.87
HMGB3P12-201ENST00000438745 PGBD5Q8N414 524 aa3.34□□□□□ -1.87
HMGB3P12-201ENST00000438745 NGEFQ8N5V2 710 aa3.34□□□□□ -1.87
HMGB3P12-201ENST00000438745 RFLNBQ8N5W9 214 aa3.34□□□□□ -1.87
HMGB3P12-201ENST00000438745 ZBTB2Q8N680 514 aa3.34□□□□□ -1.87
HMGB3P12-201ENST00000438745 TMEM116Q8NCL8 245 aa3.34□□□□□ -1.87
HMGB3P12-201ENST00000438745 SCMH1Q96GD3 660 aa3.34□□□□□ -1.87
HMGB3P12-201ENST00000438745 TXNDC15Q96J42 360 aa3.34□□□□□ -1.87
HMGB3P12-201ENST00000438745 ITPAQ9BY32 194 aa3.34□□□□□ -1.87
HMGB3P12-201ENST00000438745 TMX4Q9H1E5 349 aaPredicted RBP3.34□□□□□ -1.87
HMGB3P12-201ENST00000438745 PLEKHA4Q9H4M7 779 aa3.34□□□□□ -1.87
HMGB3P12-201ENST00000438745 PRKRIP1Q9H875 184 aaPredicted RBP3.34□□□□□ -1.87
HMGB3P12-201ENST00000438745 POLR1BQ9H9Y6 1135 aa3.34□□□□□ -1.87
HMGB3P12-201ENST00000438745 SCPEP1Q9HB40 452 aa3.34□□□□□ -1.87
HMGB3P12-201ENST00000438745 FBRSL1Q9HCM7 1045 aaKnown RBP3.34□□□□□ -1.87
HMGB3P12-201ENST00000438745 DDX4Q9NQI0 724 aaKnown RBP3.34□□□□□ -1.87
HMGB3P12-201ENST00000438745 SEPT11Q9NVA2 429 aaKnown RBP3.34□□□□□ -1.87
HMGB3P12-201ENST00000438745 MTMR10Q9NXD2 777 aa3.34□□□□□ -1.87
HMGB3P12-201ENST00000438745 HAO1Q9UJM8 370 aa3.34□□□□□ -1.87
HMGB3P12-201ENST00000438745 AAR2Q9Y312 384 aaKnown RBP3.34□□□□□ -1.87
HMGB3P12-201ENST00000438745 WNK3Q9BYP7 1800 aa3.34□□□□□ -1.87
HMGB3P12-201ENST00000438745 RNF123Q5XPI4 1314 aa3.34□□□□□ -1.87
HMGB3P12-201ENST00000438745 POLR3AO14802 1390 aaPredicted RBP3.34□□□□□ -1.88
HMGB3P12-201ENST00000438745 KNDC1Q76NI1 1749 aa3.33□□□□□ -1.88
HMGB3P12-201ENST00000438745 ARFGEF1Q9Y6D6 1849 aa3.33□□□□□ -1.88
HMGB3P12-201ENST00000438745 MAGEA13PA6NCF6 341 aa3.33□□□□□ -1.88
HMGB3P12-201ENST00000438745 DOK2O60496 412 aa3.33□□□□□ -1.88
HMGB3P12-201ENST00000438745 NKX2-2O95096 273 aa3.33□□□□□ -1.88
HMGB3P12-201ENST00000438745 CCNDBP1O95273 360 aa3.33□□□□□ -1.88
HMGB3P12-201ENST00000438745 DDX58O95786 925 aaKnown RBP3.33□□□□□ -1.88
HMGB3P12-201ENST00000438745 MLYCDO95822 493 aa3.33□□□□□ -1.88
HMGB3P12-201ENST00000438745 IGHV4-30-4P0DP06 118 aa3.33□□□□□ -1.88
HMGB3P12-201ENST00000438745 ACADMP11310 421 aa3.33□□□□□ -1.88
HMGB3P12-201ENST00000438745 RFC4P35249 363 aa3.33□□□□□ -1.88
HMGB3P12-201ENST00000438745 PPARGP37231 505 aaPredicted RBP3.33□□□□□ -1.88
HMGB3P12-201ENST00000438745 RPL3P39023 403 aaKnown RBP3.33□□□□□ -1.88
HMGB3P12-201ENST00000438745 F2RL1P55085 397 aa3.33□□□□□ -1.88
HMGB3P12-201ENST00000438745 HUNKP57058 714 aa3.33□□□□□ -1.88
HMGB3P12-201ENST00000438745 ECT2LQ008S8 904 aa3.33□□□□□ -1.88
HMGB3P12-201ENST00000438745 FOXD4Q12950 439 aaPredicted RBP3.33□□□□□ -1.88
HMGB3P12-201ENST00000438745 MYBPHQ13203 477 aa3.33□□□□□ -1.88
HMGB3P12-201ENST00000438745 MAMLD1Q13495 774 aa3.33□□□□□ -1.88
HMGB3P12-201ENST00000438745 NAE1Q13564 534 aa3.33□□□□□ -1.88
HMGB3P12-201ENST00000438745 EIF4A2Q14240 407 aaKnown RBP3.33□□□□□ -1.88
HMGB3P12-201ENST00000438745 SF3B4Q15427 424 aaKnown RBP eCLIP3.33□□□□□ -1.88
HMGB3P12-201ENST00000438745 KRTAP24-1Q3LI83 254 aa3.33□□□□□ -1.88
HMGB3P12-201ENST00000438745 MMEL1Q495T6 779 aa3.33□□□□□ -1.88
HMGB3P12-201ENST00000438745 XKR9Q5GH70 373 aa3.33□□□□□ -1.88
HMGB3P12-201ENST00000438745 FAM76BQ5HYJ3 339 aa3.33□□□□□ -1.88
HMGB3P12-201ENST00000438745 TYW3Q6IPR3 259 aaKnown RBP3.33□□□□□ -1.88
HMGB3P12-201ENST00000438745 QSOX2Q6ZRP7 698 aa3.33□□□□□ -1.88
HMGB3P12-201ENST00000438745 ADSSL1Q8N142 457 aa3.33□□□□□ -1.88
HMGB3P12-201ENST00000438745 HUS1BQ8NHY5 278 aa3.33□□□□□ -1.88
HMGB3P12-201ENST00000438745 ZKSCAN4Q969J2 545 aaPredicted RBP3.33□□□□□ -1.88
HMGB3P12-201ENST00000438745 FBXL8Q96CD0 374 aa3.33□□□□□ -1.88
HMGB3P12-201ENST00000438745 MMABQ96EY8 250 aaPredicted RBP3.33□□□□□ -1.88
HMGB3P12-201ENST00000438745 IGSF21Q96ID5 467 aa3.33□□□□□ -1.88
HMGB3P12-201ENST00000438745 GPR108Q9NPR9 543 aa3.33□□□□□ -1.88
HMGB3P12-201ENST00000438745 OR6C3Q9NZP0 311 aa3.33□□□□□ -1.88
HMGB3P12-201ENST00000438745 CNOT8Q9UFF9 292 aaKnown RBP3.33□□□□□ -1.88
HMGB3P12-201ENST00000438745 RCOR1Q9UKL0 485 aa3.33□□□□□ -1.88
HMGB3P12-201ENST00000438745 ICAM5Q9UMF0 924 aa3.33□□□□□ -1.88
HMGB3P12-201ENST00000438745 NFE2L3Q9Y4A8 694 aa3.33□□□□□ -1.88
HMGB3P12-201ENST00000438745 LAS1LQ9Y4W2 734 aaKnown RBP3.33□□□□□ -1.88
HMGB3P12-201ENST00000438745 NFS1Q9Y697 457 aa3.33□□□□□ -1.88
HMGB3P12-201ENST00000438745 CPSF1Q10570 1443 aaKnown RBP3.33□□□□□ -1.88
HMGB3P12-201ENST00000438745 USP54Q70EL1 1684 aa3.33□□□□□ -1.88
HMGB3P12-201ENST00000438745 KIAA1551Q9HCM1 1747 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms