RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 ABTB1Q969K4 478 aaPredicted RBP3.72□□□□□ -1.81
LSM1P1-201ENST00000438629 PIGTQ969N2 578 aa3.72□□□□□ -1.81
LSM1P1-201ENST00000438629 GAD1Q99259 594 aa3.72□□□□□ -1.81
LSM1P1-201ENST00000438629 C1QTNF4Q9BXJ3 329 aa3.72□□□□□ -1.81
LSM1P1-201ENST00000438629 HRH4Q9H3N8 390 aa3.72□□□□□ -1.81
LSM1P1-201ENST00000438629 PIGMQ9H3S5 423 aa3.72□□□□□ -1.81
LSM1P1-201ENST00000438629 GIMAP4Q9NUV9 329 aa3.72□□□□□ -1.81
LSM1P1-201ENST00000438629 TRMT1Q9NXH9 659 aaKnown RBP3.72□□□□□ -1.81
LSM1P1-201ENST00000438629 ARHGEF38Q9NXL2 777 aa3.72□□□□□ -1.81
LSM1P1-201ENST00000438629 PSD3Q9NYI0 1048 aa3.72□□□□□ -1.81
LSM1P1-201ENST00000438629 MALT1Q9UDY8 824 aa3.72□□□□□ -1.81
LSM1P1-201ENST00000438629 PADI1Q9ULC6 663 aa3.72□□□□□ -1.81
LSM1P1-201ENST00000438629 TMEM184BQ9Y519 407 aaPredicted RBP3.72□□□□□ -1.81
LSM1P1-201ENST00000438629 SNX8Q9Y5X2 465 aa3.72□□□□□ -1.81
LSM1P1-201ENST00000438629 TRIP12Q14669 1992 aaPredicted RBP3.72□□□□□ -1.81
LSM1P1-201ENST00000438629 PDS5AQ29RF7 1337 aaKnown RBP3.71□□□□□ -1.81
LSM1P1-201ENST00000438629 PASKQ96RG2 1323 aa3.71□□□□□ -1.81
LSM1P1-201ENST00000438629 IGHV4OR15-8A0A075B7B6 117 aa3.71□□□□□ -1.82
LSM1P1-201ENST00000438629 PLSCR5A0PG75 271 aa3.71□□□□□ -1.82
LSM1P1-201ENST00000438629 C4orf47A7E2U8 309 aa3.71□□□□□ -1.82
LSM1P1-201ENST00000438629 HNRNPCL2B2RXH8 293 aa3.71□□□□□ -1.82
LSM1P1-201ENST00000438629 CCER2I3L3R5 266 aa3.71□□□□□ -1.82
LSM1P1-201ENST00000438629 ANKRD28O15084 1053 aa3.71□□□□□ -1.82
LSM1P1-201ENST00000438629 BUD23O43709 281 aaKnown RBP3.71□□□□□ -1.82
LSM1P1-201ENST00000438629 GH2P01242 217 aa3.71□□□□□ -1.82
LSM1P1-201ENST00000438629 PTMAP06454 111 aaKnown RBP3.71□□□□□ -1.82
LSM1P1-201ENST00000438629 LDHCP07864 332 aa3.71□□□□□ -1.82
LSM1P1-201ENST00000438629 COPB2P35606 906 aa3.71□□□□□ -1.82
LSM1P1-201ENST00000438629 SLC15A1P46059 708 aa3.71□□□□□ -1.82
LSM1P1-201ENST00000438629 LMAN1P49257 510 aa3.71□□□□□ -1.82
LSM1P1-201ENST00000438629 CTSCP53634 463 aa3.71□□□□□ -1.82
LSM1P1-201ENST00000438629 SNX16P57768 344 aa3.71□□□□□ -1.82
LSM1P1-201ENST00000438629 STK4Q13043 487 aa3.71□□□□□ -1.82
LSM1P1-201ENST00000438629 SYT16Q17RD7 645 aa3.71□□□□□ -1.82
LSM1P1-201ENST00000438629 IZUMO4Q1ZYL8 232 aa3.71□□□□□ -1.82
LSM1P1-201ENST00000438629 SETMARQ53H47 684 aaPredicted RBP3.71□□□□□ -1.82
LSM1P1-201ENST00000438629 CFAP58Q5T655 872 aa3.71□□□□□ -1.82
LSM1P1-201ENST00000438629 IRAK1BP1Q5VVH5 260 aa3.71□□□□□ -1.82
LSM1P1-201ENST00000438629 NSUN5P2Q63ZY6 315 aa3.71□□□□□ -1.82
LSM1P1-201ENST00000438629 ZNF704Q6ZNC4 412 aaPredicted RBP3.71□□□□□ -1.82
LSM1P1-201ENST00000438629 PLEKHM3Q6ZWE6 761 aa3.71□□□□□ -1.82
LSM1P1-201ENST00000438629 MEPCEQ7L2J0 689 aaKnown RBP3.71□□□□□ -1.82
LSM1P1-201ENST00000438629 GALNT5Q7Z7M9 940 aa3.71□□□□□ -1.82
LSM1P1-201ENST00000438629 KMT5CQ86Y97 462 aa3.71□□□□□ -1.82
LSM1P1-201ENST00000438629 MAP7D3Q8IWC1 876 aa3.71□□□□□ -1.82
LSM1P1-201ENST00000438629 GCSAMQ8N6F7 178 aa3.71□□□□□ -1.82
LSM1P1-201ENST00000438629 RBMXL3Q8N7X1 1067 aaKnown RBP3.71□□□□□ -1.82
LSM1P1-201ENST00000438629 SLC38A9Q8NBW4 561 aa3.71□□□□□ -1.82
LSM1P1-201ENST00000438629 RDM1Q8NG50 284 aa3.71□□□□□ -1.82
LSM1P1-201ENST00000438629 GSDMBQ8TAX9 411 aa3.71□□□□□ -1.82
LSM1P1-201ENST00000438629 PPP4R1Q8TF05 950 aa3.71□□□□□ -1.82
LSM1P1-201ENST00000438629 RHBDF1Q96CC6 855 aa3.71□□□□□ -1.82
LSM1P1-201ENST00000438629 FAM84BQ96KN1 310 aaPredicted RBP3.71□□□□□ -1.82
LSM1P1-201ENST00000438629 NEURL2Q9BR09 285 aa3.71□□□□□ -1.82
LSM1P1-201ENST00000438629 DDX31Q9H8H2 851 aaKnown RBP3.71□□□□□ -1.82
LSM1P1-201ENST00000438629 TTLL3Q9Y4R7 772 aa3.71□□□□□ -1.82
LSM1P1-201ENST00000438629 PCDHGB1Q9Y5G3 927 aa3.71□□□□□ -1.82
LSM1P1-201ENST00000438629 RPS6KL1Q9Y6S9 549 aa3.71□□□□□ -1.82
LSM1P1-201ENST00000438629 CGNL1Q0VF96 1302 aa3.7□□□□□ -1.82
LSM1P1-201ENST00000438629 PRAG1Q86YV5 1406 aa3.7□□□□□ -1.82
LSM1P1-201ENST00000438629 SRRM3A6NNA2 597 aaPredicted RBP3.7□□□□□ -1.82
LSM1P1-201ENST00000438629 C15orf62A8K5M9 175 aa3.7□□□□□ -1.82
LSM1P1-201ENST00000438629 PRSS47A8MTI9 375 aa3.7□□□□□ -1.82
LSM1P1-201ENST00000438629 ANKRD66B4E2M5 251 aa3.7□□□□□ -1.82
LSM1P1-201ENST00000438629 CTDSP2O14595 271 aa3.7□□□□□ -1.82
LSM1P1-201ENST00000438629 TIMM44O43615 452 aa3.7□□□□□ -1.82
LSM1P1-201ENST00000438629 DDNO94850 711 aaPredicted RBP3.7□□□□□ -1.82
LSM1P1-201ENST00000438629 PPP1R3DO95685 299 aa3.7□□□□□ -1.82
LSM1P1-201ENST00000438629 ZNF23P17027 643 aa3.7□□□□□ -1.82
LSM1P1-201ENST00000438629 CORO1AP31146 461 aaKnown RBP3.7□□□□□ -1.82
LSM1P1-201ENST00000438629 MMP14P50281 582 aa3.7□□□□□ -1.82
LSM1P1-201ENST00000438629 PDLIM4P50479 330 aa3.7□□□□□ -1.82
LSM1P1-201ENST00000438629 RRP1P56182 461 aaKnown RBP3.7□□□□□ -1.82
LSM1P1-201ENST00000438629 POU5F1Q01860 360 aaKnown RBP3.7□□□□□ -1.82
LSM1P1-201ENST00000438629 GTF2H2Q13888 395 aa3.7□□□□□ -1.82
LSM1P1-201ENST00000438629 ZNF234Q14588 700 aa3.7□□□□□ -1.82
LSM1P1-201ENST00000438629 KCTD2Q14681 263 aa3.7□□□□□ -1.82
LSM1P1-201ENST00000438629 ZNF585BQ52M93 769 aa3.7□□□□□ -1.82
LSM1P1-201ENST00000438629 C9orf57Q5W0N0 161 aa3.7□□□□□ -1.82
LSM1P1-201ENST00000438629 ZDHHC20Q5W0Z9 365 aa3.7□□□□□ -1.82
LSM1P1-201ENST00000438629 GTF2H2CQ6P1K8 395 aa3.7□□□□□ -1.82
LSM1P1-201ENST00000438629 TUBA1AQ71U36 451 aa3.7□□□□□ -1.82
LSM1P1-201ENST00000438629 ARMC9Q7Z3E5 817 aa3.7□□□□□ -1.82
LSM1P1-201ENST00000438629 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.7□□□□□ -1.82
LSM1P1-201ENST00000438629 SCYL3Q8IZE3 742 aa3.7□□□□□ -1.82
LSM1P1-201ENST00000438629 C1orf87Q8N0U7 546 aa3.7□□□□□ -1.82
LSM1P1-201ENST00000438629 MUC20Q8N307 709 aaPredicted RBP3.7□□□□□ -1.82
LSM1P1-201ENST00000438629 SLC5A8Q8N695 610 aa3.7□□□□□ -1.82
LSM1P1-201ENST00000438629 MCUQ8NE86 351 aa3.7□□□□□ -1.82
LSM1P1-201ENST00000438629 OR2AK2Q8NG84 335 aa3.7□□□□□ -1.82
LSM1P1-201ENST00000438629 LNX1Q8TBB1 728 aaPredicted RBP3.7□□□□□ -1.82
LSM1P1-201ENST00000438629 SECISBP2LQ93073 1101 aaKnown RBP3.7□□□□□ -1.82
LSM1P1-201ENST00000438629 TUBA1CQ9BQE3 449 aa3.7□□□□□ -1.82
LSM1P1-201ENST00000438629 SRSF8Q9BRL6 282 aaKnown RBP3.7□□□□□ -1.82
LSM1P1-201ENST00000438629 SYT17Q9BSW7 474 aa3.7□□□□□ -1.82
LSM1P1-201ENST00000438629 MRPL1Q9BYD6 325 aaKnown RBP3.7□□□□□ -1.82
LSM1P1-201ENST00000438629 SPRY4Q9C004 299 aa3.7□□□□□ -1.82
LSM1P1-201ENST00000438629 RAD21L1Q9H4I0 556 aa3.7□□□□□ -1.82
LSM1P1-201ENST00000438629 EBF2Q9HAK2 575 aa3.7□□□□□ -1.82
LSM1P1-201ENST00000438629 TCP11L1Q9NUJ3 509 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms