RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 CLPBQ9H078 707 aa25.48■■□□□ 1.67
CPNE1-216ENST00000437340 COPG1Q9Y678 874 aaKnown RBP25.48■■□□□ 1.67
CPNE1-216ENST00000437340 GLYATL1P3A0A0U1RQE8 302 aa25.47■■□□□ 1.67
CPNE1-216ENST00000437340 EPOPA6NHQ4 379 aa25.47■■□□□ 1.67
CPNE1-216ENST00000437340 CDC7O00311 574 aa25.47■■□□□ 1.67
CPNE1-216ENST00000437340 PER2O15055 1255 aa25.47■■□□□ 1.67
CPNE1-216ENST00000437340 CDK14O94921 469 aa25.47■■□□□ 1.67
CPNE1-216ENST00000437340 BPIP17213 487 aa25.47■■□□□ 1.67
CPNE1-216ENST00000437340 ITGAXP20702 1163 aa25.47■■□□□ 1.67
CPNE1-216ENST00000437340 ICE2Q659A1 982 aa25.47■■□□□ 1.67
CPNE1-216ENST00000437340 TMEM198Q66K66 360 aa25.47■■□□□ 1.67
CPNE1-216ENST00000437340 KIAA0907Q7Z7F0 614 aaPredicted RBP25.47■■□□□ 1.67
CPNE1-216ENST00000437340 ADGRD2Q7Z7M1 963 aa25.47■■□□□ 1.67
CPNE1-216ENST00000437340 EEF1AKMT1Q8WVE0 214 aa25.47■■□□□ 1.67
CPNE1-216ENST00000437340 MCCC1Q96RQ3 725 aaPredicted RBP25.47■■□□□ 1.67
CPNE1-216ENST00000437340 SLC2A11Q9BYW1 496 aa25.47■■□□□ 1.67
CPNE1-216ENST00000437340 GNPTGQ9UJJ9 305 aa25.47■■□□□ 1.67
CPNE1-216ENST00000437340 FIS1Q9Y3D6 152 aa25.47■■□□□ 1.67
CPNE1-216ENST00000437340 NPEPPSL1A6NEC2 478 aa25.46■■□□□ 1.67
CPNE1-216ENST00000437340 SLC9A3R1O14745 358 aaPredicted RBP25.46■■□□□ 1.67
CPNE1-216ENST00000437340 CCNT2O60583 730 aaKnown RBP25.46■■□□□ 1.67
CPNE1-216ENST00000437340 SIX3O95343 332 aaPredicted RBP25.46■■□□□ 1.67
CPNE1-216ENST00000437340 ANP32DO95626 131 aa25.46■■□□□ 1.67
CPNE1-216ENST00000437340 CCNHP51946 323 aaPredicted RBP25.46■■□□□ 1.67
CPNE1-216ENST00000437340 CCNG1P51959 295 aa25.46■■□□□ 1.67
CPNE1-216ENST00000437340 ANKS6Q68DC2 871 aa25.46■■□□□ 1.67
CPNE1-216ENST00000437340 PGM2L1Q6PCE3 622 aa25.46■■□□□ 1.67
CPNE1-216ENST00000437340 STMN2Q93045 179 aa25.46■■□□□ 1.67
CPNE1-216ENST00000437340 LINC00597Q9H2U6 94 aa25.46■■□□□ 1.67
CPNE1-216ENST00000437340 GPR39O43194 453 aa25.46■■□□□ 1.67
CPNE1-216ENST00000437340 RPS17P08708 135 aaKnown RBP25.46■■□□□ 1.67
CPNE1-216ENST00000437340 ACRV1P26436 265 aa25.46■■□□□ 1.67
CPNE1-216ENST00000437340 CDH13P55290 713 aa25.46■■□□□ 1.67
CPNE1-216ENST00000437340 ACTR3P61158 418 aa25.46■■□□□ 1.67
CPNE1-216ENST00000437340 SH3BP2P78314 561 aa25.46■■□□□ 1.67
CPNE1-216ENST00000437340 LY6G5CQ5SRR4 150 aa25.46■■□□□ 1.67
CPNE1-216ENST00000437340 CRTC1Q6UUV9 634 aa25.46■■□□□ 1.67
CPNE1-216ENST00000437340 RBM23Q86U06 439 aaKnown RBP25.46■■□□□ 1.67
CPNE1-216ENST00000437340 SNX32Q86XE0 403 aa25.46■■□□□ 1.67
CPNE1-216ENST00000437340 ADGRG2Q8IZP9 1017 aa25.46■■□□□ 1.67
CPNE1-216ENST00000437340 CLPTM1LQ96KA5 538 aa25.46■■□□□ 1.67
CPNE1-216ENST00000437340 NPIPB15A6NHN6 443 aaPredicted RBP25.45■■□□□ 1.66
CPNE1-216ENST00000437340 AGAP14A8MT82 685 aa25.45■■□□□ 1.66
CPNE1-216ENST00000437340 WASH3PC4AMC7 463 aa25.45■■□□□ 1.66
CPNE1-216ENST00000437340 GNAZP19086 355 aa25.45■■□□□ 1.66
CPNE1-216ENST00000437340 EEF1DP29692 281 aaKnown RBP25.45■■□□□ 1.66
CPNE1-216ENST00000437340 NTHL1P78549 312 aa25.45■■□□□ 1.66
CPNE1-216ENST00000437340 LCP2Q13094 533 aa25.45■■□□□ 1.66
CPNE1-216ENST00000437340 UGT3A2Q3SY77 523 aa25.45■■□□□ 1.66
CPNE1-216ENST00000437340 ACCSLQ4AC99 568 aa25.45■■□□□ 1.66
CPNE1-216ENST00000437340 PTRHD1Q6GMV3 140 aaKnown RBP25.45■■□□□ 1.66
CPNE1-216ENST00000437340 DPY19L3Q6ZPD9 716 aa25.45■■□□□ 1.66
CPNE1-216ENST00000437340 GRASPQ7Z6J2 395 aaPredicted RBP25.45■■□□□ 1.66
CPNE1-216ENST00000437340 ADIPOR2Q86V24 386 aa25.45■■□□□ 1.66
CPNE1-216ENST00000437340 CPNE9Q8IYJ1 553 aa25.45■■□□□ 1.66
CPNE1-216ENST00000437340 SLC28A3Q9HAS3 691 aa25.45■■□□□ 1.66
CPNE1-216ENST00000437340 MID1IP1Q9NPA3 183 aa25.45■■□□□ 1.66
CPNE1-216ENST00000437340 G3BP2Q9UN86 482 aaKnown RBP25.45■■□□□ 1.66
CPNE1-216ENST00000437340 NOTCH4Q99466 2003 aa25.45■■□□□ 1.66
CPNE1-216ENST00000437340 ZNF106Q9H2Y7 1883 aaKnown RBP25.45■■□□□ 1.66
CPNE1-216ENST00000437340 PSMG1O95456 288 aa25.44■■□□□ 1.66
CPNE1-216ENST00000437340 BMP8BP34820 402 aa25.44■■□□□ 1.66
CPNE1-216ENST00000437340 CLCQ05315 142 aa25.44■■□□□ 1.66
CPNE1-216ENST00000437340 ZDHHC20Q5W0Z9 365 aa25.44■■□□□ 1.66
CPNE1-216ENST00000437340 GPSM1Q86YR5 675 aa25.44■■□□□ 1.66
CPNE1-216ENST00000437340 DEFB107AQ8IZN7 70 aa25.44■■□□□ 1.66
CPNE1-216ENST00000437340 AHI1Q8N157 1196 aa25.44■■□□□ 1.66
CPNE1-216ENST00000437340 KIAA1958Q8N8K9 716 aa25.44■■□□□ 1.66
CPNE1-216ENST00000437340 NDE1Q9NXR1 346 aa25.44■■□□□ 1.66
CPNE1-216ENST00000437340 SLCO3A1Q9UIG8 710 aa25.44■■□□□ 1.66
CPNE1-216ENST00000437340 CRLS1Q9UJA2 301 aa25.44■■□□□ 1.66
CPNE1-216ENST00000437340 SCN8AQ9UQD0 1980 aa25.44■■□□□ 1.66
CPNE1-216ENST00000437340 AZIN1O14977 448 aa25.44■■□□□ 1.66
CPNE1-216ENST00000437340 UBDO15205 165 aa25.44■■□□□ 1.66
CPNE1-216ENST00000437340 BMP1P13497 986 aa25.44■■□□□ 1.66
CPNE1-216ENST00000437340 SQLEQ14534 574 aa25.44■■□□□ 1.66
CPNE1-216ENST00000437340 KANK2Q63ZY3 851 aa25.44■■□□□ 1.66
CPNE1-216ENST00000437340 CLEC6AQ6EIG7 209 aa25.44■■□□□ 1.66
CPNE1-216ENST00000437340 C16orf89Q6UX73 402 aa25.44■■□□□ 1.66
CPNE1-216ENST00000437340 RIPOR1Q6ZS17 1223 aa25.44■■□□□ 1.66
CPNE1-216ENST00000437340 TDHQ8IZJ6 230 aa25.44■■□□□ 1.66
CPNE1-216ENST00000437340 KYQ8NBH2 561 aa25.44■■□□□ 1.66
CPNE1-216ENST00000437340 C19orf60Q96EN9 201 aa25.44■■□□□ 1.66
CPNE1-216ENST00000437340 ZSWIM3Q96MP5 696 aa25.44■■□□□ 1.66
CPNE1-216ENST00000437340 PANX3Q96QZ0 392 aa25.44■■□□□ 1.66
CPNE1-216ENST00000437340 ZDHHC6Q9H6R6 413 aa25.44■■□□□ 1.66
CPNE1-216ENST00000437340 SARS2Q9NP81 518 aaKnown RBP25.44■■□□□ 1.66
CPNE1-216ENST00000437340 CDH22Q9UJ99 828 aa25.44■■□□□ 1.66
CPNE1-216ENST00000437340 TSPAN8P19075 237 aa25.43■■□□□ 1.66
CPNE1-216ENST00000437340 POLR2LP62875 67 aaKnown RBP25.43■■□□□ 1.66
CPNE1-216ENST00000437340 CHRNA6Q15825 494 aa25.43■■□□□ 1.66
CPNE1-216ENST00000437340 C1orf146Q5VVC0 180 aa25.43■■□□□ 1.66
CPNE1-216ENST00000437340 CYHR1Q6ZMK1 362 aa25.43■■□□□ 1.66
CPNE1-216ENST00000437340 TSPAN33Q86UF1 283 aa25.43■■□□□ 1.66
CPNE1-216ENST00000437340 TRPC4APQ8TEL6 797 aa25.43■■□□□ 1.66
CPNE1-216ENST00000437340 ZNF707Q96C28 371 aaPredicted RBP25.43■■□□□ 1.66
CPNE1-216ENST00000437340 ASIC4Q96FT7 647 aa25.43■■□□□ 1.66
CPNE1-216ENST00000437340 ANKRD27Q96NW4 1050 aa25.43■■□□□ 1.66
CPNE1-216ENST00000437340 CIPCQ9C0C6 399 aa25.43■■□□□ 1.66
CPNE1-216ENST00000437340 STOML1Q9UBI4 398 aa25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms